RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 KDM5DQ9BY66 1539 aa19.41■□□□□ 0.7
YIPF3-203ENST00000416380 VWDEQ8N2E2 1590 aa19.4■□□□□ 0.7
YIPF3-203ENST00000416380 ITGAEP38570 1179 aa19.4■□□□□ 0.7
YIPF3-203ENST00000416380 PRDM15P57071 1507 aaPredicted RBP19.4■□□□□ 0.7
YIPF3-203ENST00000416380 PPP6R1Q9UPN7 881 aa19.39■□□□□ 0.69
YIPF3-203ENST00000416380 RIMS1Q86UR5 1692 aaKnown RBP19.39■□□□□ 0.69
YIPF3-203ENST00000416380 FER1L4A9Z1Z3 1794 aa19.39■□□□□ 0.69
YIPF3-203ENST00000416380 GGT6Q6P531 493 aa19.38■□□□□ 0.69
YIPF3-203ENST00000416380 FAM135AQ9P2D6 1515 aa19.37■□□□□ 0.69
YIPF3-203ENST00000416380 HFM1A2PYH4 1435 aa19.37■□□□□ 0.69
YIPF3-203ENST00000416380 ABCC3O15438 1527 aa19.36■□□□□ 0.69
YIPF3-203ENST00000416380 CNTLNQ9NXG0 1405 aa19.35■□□□□ 0.69
YIPF3-203ENST00000416380 MROH2AA6NES4 1674 aa19.33■□□□□ 0.69
YIPF3-203ENST00000416380 ZMYM3Q14202 1370 aa19.33■□□□□ 0.69
YIPF3-203ENST00000416380 CEBPAP49715 358 aaPredicted RBP19.33■□□□□ 0.68
YIPF3-203ENST00000416380 LMTK2Q8IWU2 1503 aa19.33■□□□□ 0.68
YIPF3-203ENST00000416380 CLTCQ00610 1675 aaKnown RBP19.33■□□□□ 0.68
YIPF3-203ENST00000416380 UNC13BO14795 1591 aa19.32■□□□□ 0.68
YIPF3-203ENST00000416380 C3P01024 1663 aa19.32■□□□□ 0.68
YIPF3-203ENST00000416380 GCC2Q8IWJ2 1684 aa19.31■□□□□ 0.68
YIPF3-203ENST00000416380 ZC3H13Q5T200 1668 aaKnown RBP19.27■□□□□ 0.68
YIPF3-203ENST00000416380 ARHGAP31Q2M1Z3 1444 aa19.27■□□□□ 0.68
YIPF3-203ENST00000416380 WASHC2CQ9Y4E1 1318 aa19.26■□□□□ 0.67
YIPF3-203ENST00000416380 PZPP20742 1482 aa19.26■□□□□ 0.67
YIPF3-203ENST00000416380 NPATQ14207 1427 aa19.25■□□□□ 0.67
YIPF3-203ENST00000416380 CEP152O94986 1710 aa19.24■□□□□ 0.67
YIPF3-203ENST00000416380 CAMSAP1Q5T5Y3 1602 aa19.23■□□□□ 0.67
YIPF3-203ENST00000416380 FBXO31Q5XUX0 539 aaPredicted RBP19.23■□□□□ 0.67
YIPF3-203ENST00000416380 IQGAP3Q86VI3 1631 aa19.22■□□□□ 0.67
YIPF3-203ENST00000416380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.22■□□□□ 0.671e-6■■□□□ 12.8
YIPF3-203ENST00000416380 LMTK3Q96Q04 1460 aa19.22■□□□□ 0.67
YIPF3-203ENST00000416380 EFCAB6Q5THR3 1501 aa19.21■□□□□ 0.67
YIPF3-203ENST00000416380 SPATA31D1Q6ZQQ2 1576 aa19.2■□□□□ 0.66
YIPF3-203ENST00000416380 SETD5Q9C0A6 1442 aa19.19■□□□□ 0.66
YIPF3-203ENST00000416380 NUP155O75694 1391 aa19.19■□□□□ 0.66
YIPF3-203ENST00000416380 ERVK-7P63135 1459 aa19.18■□□□□ 0.66
YIPF3-203ENST00000416380 ESF1Q9H501 851 aaKnown RBP19.18■□□□□ 0.66
YIPF3-203ENST00000416380 NOS1P29475 1434 aa19.17■□□□□ 0.66
YIPF3-203ENST00000416380 TET3O43151 1660 aa19.17■□□□□ 0.66
YIPF3-203ENST00000416380 KANK1Q14678 1352 aa19.17■□□□□ 0.66
YIPF3-203ENST00000416380 RAB3GAP2Q9H2M9 1393 aa19.15■□□□□ 0.66
YIPF3-203ENST00000416380 PLPPR3Q6T4P5 718 aa19.14■□□□□ 0.65
YIPF3-203ENST00000416380 RPRD2Q5VT52 1461 aaKnown RBP19.14■□□□□ 0.65
YIPF3-203ENST00000416380 E9PCH4 1651 aa19.13■□□□□ 0.65
YIPF3-203ENST00000416380 PREX1Q8TCU6 1659 aa19.13■□□□□ 0.65
YIPF3-203ENST00000416380 SYNMO15061 1565 aa19.12■□□□□ 0.65
YIPF3-203ENST00000416380 TNRQ92752 1358 aa19.12■□□□□ 0.65
YIPF3-203ENST00000416380 MYO3AQ8NEV4 1616 aa19.11■□□□□ 0.65
YIPF3-203ENST00000416380 HRCP23327 699 aa19.11■□□□□ 0.65
YIPF3-203ENST00000416380 PLA2R1Q13018 1463 aa19.1■□□□□ 0.65
YIPF3-203ENST00000416380 PTPRTO14522 1441 aa19.1■□□□□ 0.65
YIPF3-203ENST00000416380 ZNF142P52746 1687 aaPredicted RBP19.08■□□□□ 0.65
YIPF3-203ENST00000416380 SETD1BQ9UPS6 1966 aaKnown RBP19.08■□□□□ 0.65
YIPF3-203ENST00000416380 TRIM26Q12899 539 aaPredicted RBP19.08■□□□□ 0.64
YIPF3-203ENST00000416380 UHRF1BP1Q6BDS2 1440 aa19.08■□□□□ 0.64
YIPF3-203ENST00000416380 A2ML1A8K2U0 1454 aa19.07■□□□□ 0.64
YIPF3-203ENST00000416380 CEP170BQ9Y4F5 1589 aaPredicted RBP19.06■□□□□ 0.64
YIPF3-203ENST00000416380 NLRP1Q9C000 1473 aa19.06■□□□□ 0.64
YIPF3-203ENST00000416380 PIK3C2BO00750 1634 aa19.05■□□□□ 0.64
YIPF3-203ENST00000416380 HSPA2P54652 639 aa19.04■□□□□ 0.64
YIPF3-203ENST00000416380 UGGT1Q9NYU2 1555 aa19.03■□□□□ 0.64
YIPF3-203ENST00000416380 IDI1Q13907 227 aa19.03■□□□□ 0.64
YIPF3-203ENST00000416380 PKD2Q13563 968 aa19.02■□□□□ 0.64
YIPF3-203ENST00000416380 MPHOSPH9Q99550 1183 aa19.02■□□□□ 0.64
YIPF3-203ENST00000416380 TRIM52Q96A61 297 aa19.01■□□□□ 0.63
YIPF3-203ENST00000416380 SLC4A1APQ9BWU0 796 aaKnown RBP18.99■□□□□ 0.63
YIPF3-203ENST00000416380 TRPM2O94759 1503 aa18.99■□□□□ 0.63
YIPF3-203ENST00000416380 ACIN1Q9UKV3 1341 aaKnown RBP18.99■□□□□ 0.63
YIPF3-203ENST00000416380 UBR1Q8IWV7 1749 aa18.98■□□□□ 0.63
YIPF3-203ENST00000416380 FOXD1Q16676 465 aa18.98■□□□□ 0.63
YIPF3-203ENST00000416380 ARHGAP23Q9P227 1491 aa18.97■□□□□ 0.63
YIPF3-203ENST00000416380 STRCQ7RTU9 1775 aa18.97■□□□□ 0.63
YIPF3-203ENST00000416380 SLC52A1Q9NWF4 448 aa18.97■□□□□ 0.63
YIPF3-203ENST00000416380 CFAP65Q6ZU64 1925 aaKnown RBP18.97■□□□□ 0.63
YIPF3-203ENST00000416380 KDM5AP29375 1690 aaKnown RBP18.96■□□□□ 0.63
YIPF3-203ENST00000416380 SPHKAPQ2M3C7 1700 aa18.95■□□□□ 0.62
YIPF3-203ENST00000416380 TMEM131LA2VDJ0 1609 aa18.94■□□□□ 0.62
YIPF3-203ENST00000416380 ADGRB3O60242 1522 aa18.94■□□□□ 0.62
YIPF3-203ENST00000416380 SLIT1O75093 1534 aa18.94■□□□□ 0.62
YIPF3-203ENST00000416380 CLTCL1P53675 1640 aa18.93■□□□□ 0.62
YIPF3-203ENST00000416380 NEURL4Q96JN8 1562 aa18.92■□□□□ 0.62
YIPF3-203ENST00000416380 ANKRD30BQ9BXX2 1392 aa18.92■□□□□ 0.62
YIPF3-203ENST00000416380 ZFYVE9O95405 1425 aa18.91■□□□□ 0.62
YIPF3-203ENST00000416380 THEMISQ8N1K5 641 aaPredicted RBP18.9■□□□□ 0.62
YIPF3-203ENST00000416380 TMEM2Q9UHN6 1383 aa18.9■□□□□ 0.62
YIPF3-203ENST00000416380 LTKP29376 864 aa18.89■□□□□ 0.61
YIPF3-203ENST00000416380 MED14O60244 1454 aa18.89■□□□□ 0.61
YIPF3-203ENST00000416380 NCKAP5LQ9HCH0 1330 aa18.88■□□□□ 0.61
YIPF3-203ENST00000416380 SPATA31E1Q6ZUB1 1445 aa18.86■□□□□ 0.61
YIPF3-203ENST00000416380 DHX57Q6P158 1386 aaKnown RBP18.84■□□□□ 0.61
YIPF3-203ENST00000416380 MYO5BQ9ULV0 1848 aa18.83■□□□□ 0.6
YIPF3-203ENST00000416380 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
YIPF3-203ENST00000416380 SCAF11Q99590 1463 aaKnown RBP18.81■□□□□ 0.6
YIPF3-203ENST00000416380 NEXMIFQ5QGS0 1516 aa18.8■□□□□ 0.6
YIPF3-203ENST00000416380 RIMS2Q9UQ26 1411 aa18.8■□□□□ 0.6
YIPF3-203ENST00000416380 ANKLE2Q86XL3 938 aa18.79■□□□□ 0.6
YIPF3-203ENST00000416380 CCDC144AA2RUR9 1427 aa18.79■□□□□ 0.6
YIPF3-203ENST00000416380 POLR1AO95602 1720 aaPredicted RBP18.79■□□□□ 0.6
YIPF3-203ENST00000416380 NPHP4O75161 1426 aaPredicted RBP18.77■□□□□ 0.6
YIPF3-203ENST00000416380 TXNDC2Q86VQ3 553 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms