RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 NPM3O75607 178 aaKnown RBP14.88□□□□□ -0.03
DEPDC4-203ENST00000416321 RNF216Q9NWF9 866 aaPredicted RBP14.88□□□□□ -0.03
DEPDC4-203ENST00000416321 MLH3Q9UHC1 1453 aa14.87□□□□□ -0.03
DEPDC4-203ENST00000416321 RICTORQ6R327 1708 aa14.86□□□□□ -0.03
DEPDC4-203ENST00000416321 RAPGEF3O95398 923 aa14.86□□□□□ -0.03
DEPDC4-203ENST00000416321 KIDINS220Q9ULH0 1771 aa14.85□□□□□ -0.03
DEPDC4-203ENST00000416321 MPHOSPH9Q99550 1183 aa14.84□□□□□ -0.03
DEPDC4-203ENST00000416321 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
DEPDC4-203ENST00000416321 NUP155O75694 1391 aa14.84□□□□□ -0.03
DEPDC4-203ENST00000416321 UNC13BO14795 1591 aa14.82□□□□□ -0.04
DEPDC4-203ENST00000416321 DHX29Q7Z478 1369 aaKnown RBP14.82□□□□□ -0.04
DEPDC4-203ENST00000416321 ZMYM4Q5VZL5 1548 aa14.82□□□□□ -0.04
DEPDC4-203ENST00000416321 KDM5DQ9BY66 1539 aa14.82□□□□□ -0.04
DEPDC4-203ENST00000416321 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
DEPDC4-203ENST00000416321 HOXD11P31277 338 aaPredicted RBP14.81□□□□□ -0.04
DEPDC4-203ENST00000416321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.04
DEPDC4-203ENST00000416321 A2MP01023 1474 aa14.81□□□□□ -0.04
DEPDC4-203ENST00000416321 FRMPD1Q5SYB0 1578 aa14.81□□□□□ -0.04
DEPDC4-203ENST00000416321 MAGI2Q86UL8 1455 aa14.8□□□□□ -0.04
DEPDC4-203ENST00000416321 ABCA6Q8N139 1617 aa14.8□□□□□ -0.04
DEPDC4-203ENST00000416321 PZPP20742 1482 aa14.79□□□□□ -0.04
DEPDC4-203ENST00000416321 KANK1Q14678 1352 aa14.79□□□□□ -0.04
DEPDC4-203ENST00000416321 DCAF8L1A6NGE4 600 aa14.78□□□□□ -0.04
DEPDC4-203ENST00000416321 KIF3BO15066 747 aa14.78□□□□□ -0.04
DEPDC4-203ENST00000416321 DIP2CQ9Y2E4 1556 aa14.77□□□□□ -0.04
DEPDC4-203ENST00000416321 FAM135AQ9P2D6 1515 aa14.76□□□□□ -0.05
DEPDC4-203ENST00000416321 IQGAP3Q86VI3 1631 aa14.76□□□□□ -0.05
DEPDC4-203ENST00000416321 DEPDC5O75140 1603 aa14.75□□□□□ -0.05
DEPDC4-203ENST00000416321 NEUROD1Q13562 356 aa14.75□□□□□ -0.05
DEPDC4-203ENST00000416321 PKD2Q13563 968 aa14.75□□□□□ -0.05
DEPDC4-203ENST00000416321 YEATS2Q9ULM3 1422 aa14.75□□□□□ -0.05
DEPDC4-203ENST00000416321 ATP10AO60312 1499 aa14.72□□□□□ -0.05
DEPDC4-203ENST00000416321 SIN3AQ96ST3 1273 aa14.72□□□□□ -0.05
DEPDC4-203ENST00000416321 PRDM15P57071 1507 aaPredicted RBP14.71□□□□□ -0.05
DEPDC4-203ENST00000416321 COL17A1Q9UMD9 1497 aaPredicted RBP14.71□□□□□ -0.05
DEPDC4-203ENST00000416321 RNF17Q9BXT8 1623 aaKnown RBP14.71□□□□□ -0.05
DEPDC4-203ENST00000416321 BCORL1Q5H9F3 1711 aa14.71□□□□□ -0.05
DEPDC4-203ENST00000416321 TONSLQ96HA7 1378 aa14.71□□□□□ -0.06
DEPDC4-203ENST00000416321 ARHGEF40Q8TER5 1519 aa14.71□□□□□ -0.06
DEPDC4-203ENST00000416321 TIMELESSQ9UNS1 1208 aa14.7□□□□□ -0.06
DEPDC4-203ENST00000416321 REREQ9P2R6 1566 aa14.69□□□□□ -0.06
DEPDC4-203ENST00000416321 GGT6Q6P531 493 aa14.69□□□□□ -0.06
DEPDC4-203ENST00000416321 ANKRD30BQ9BXX2 1392 aa14.69□□□□□ -0.06
DEPDC4-203ENST00000416321 TET3O43151 1660 aa14.68□□□□□ -0.06
DEPDC4-203ENST00000416321 MROH1Q8NDA8 1641 aa14.67□□□□□ -0.06
DEPDC4-203ENST00000416321 VWDEQ8N2E2 1590 aa14.67□□□□□ -0.06
DEPDC4-203ENST00000416321 AGLP35573 1532 aa14.65□□□□□ -0.06
DEPDC4-203ENST00000416321 CEP152O94986 1710 aa14.64□□□□□ -0.07
DEPDC4-203ENST00000416321 WASHC2CQ9Y4E1 1318 aa14.64□□□□□ -0.07
DEPDC4-203ENST00000416321 RPRD2Q5VT52 1461 aaKnown RBP14.63□□□□□ -0.07
DEPDC4-203ENST00000416321 LMTK2Q8IWU2 1503 aa14.63□□□□□ -0.07
DEPDC4-203ENST00000416321 ZC3H13Q5T200 1668 aaKnown RBP14.63□□□□□ -0.07
DEPDC4-203ENST00000416321 CCDC144AA2RUR9 1427 aa14.63□□□□□ -0.07
DEPDC4-203ENST00000416321 EFCAB6Q5THR3 1501 aa14.62□□□□□ -0.07
DEPDC4-203ENST00000416321 E9PCH4 1651 aa14.62□□□□□ -0.07
DEPDC4-203ENST00000416321 ARID4BQ4LE39 1312 aaPredicted RBP14.61□□□□□ -0.07
DEPDC4-203ENST00000416321 ABCC3O15438 1527 aa14.61□□□□□ -0.07
DEPDC4-203ENST00000416321 SPHKAPQ2M3C7 1700 aa14.6□□□□□ -0.07
DEPDC4-203ENST00000416321 ESF1Q9H501 851 aaKnown RBP14.59□□□□□ -0.07
DEPDC4-203ENST00000416321 CAMSAP1Q5T5Y3 1602 aa14.59□□□□□ -0.07
DEPDC4-203ENST00000416321 TRPM2O94759 1503 aa14.57□□□□□ -0.08
DEPDC4-203ENST00000416321 MLECQ14165 292 aa14.57□□□□□ -0.08
DEPDC4-203ENST00000416321 PPP1R15AO75807 674 aaPredicted RBP14.55□□□□□ -0.08
DEPDC4-203ENST00000416321 PLA2R1Q13018 1463 aa14.55□□□□□ -0.08
DEPDC4-203ENST00000416321 L3MBTL2Q969R5 705 aa14.54□□□□□ -0.08
DEPDC4-203ENST00000416321 PTPRTO14522 1441 aa14.54□□□□□ -0.08
DEPDC4-203ENST00000416321 SIGLEC1Q9BZZ2 1709 aa14.54□□□□□ -0.08
DEPDC4-203ENST00000416321 NPATQ14207 1427 aa14.53□□□□□ -0.08
DEPDC4-203ENST00000416321 ARHGAP31Q2M1Z3 1444 aa14.53□□□□□ -0.08
DEPDC4-203ENST00000416321 CLTCQ00610 1675 aaKnown RBP14.52□□□□□ -0.08
DEPDC4-203ENST00000416321 CNTLNQ9NXG0 1405 aa14.52□□□□□ -0.08
DEPDC4-203ENST00000416321 CLTCL1P53675 1640 aa14.51□□□□□ -0.09
DEPDC4-203ENST00000416321 CFAP65Q6ZU64 1925 aaKnown RBP14.49□□□□□ -0.09
DEPDC4-203ENST00000416321 RGL3Q3MIN7 710 aa14.49□□□□□ -0.09
DEPDC4-203ENST00000416321 KIF1BO60333 1816 aa14.48□□□□□ -0.09
DEPDC4-203ENST00000416321 CACNB1Q02641 598 aaPredicted RBP14.48□□□□□ -0.09
DEPDC4-203ENST00000416321 PREX1Q8TCU6 1659 aa14.47□□□□□ -0.09
DEPDC4-203ENST00000416321 ZNF326Q5BKZ1 582 aaKnown RBP14.47□□□□□ -0.09
DEPDC4-203ENST00000416321 NOS1P29475 1434 aa14.47□□□□□ -0.09
DEPDC4-203ENST00000416321 DCAF11Q8TEB1 546 aa14.46□□□□□ -0.09
DEPDC4-203ENST00000416321 CHGAP10645 457 aaKnown RBP14.45□□□□□ -0.1
DEPDC4-203ENST00000416321 UGGT1Q9NYU2 1555 aa14.45□□□□□ -0.1
DEPDC4-203ENST00000416321 KDM2AQ9Y2K7 1162 aa14.45□□□□□ -0.1
DEPDC4-203ENST00000416321 ERVK-7P63135 1459 aa14.44□□□□□ -0.1
DEPDC4-203ENST00000416321 NEURL4Q96JN8 1562 aa14.44□□□□□ -0.1
DEPDC4-203ENST00000416321 SPATA31E1Q6ZUB1 1445 aa14.44□□□□□ -0.1
DEPDC4-203ENST00000416321 ZNF316A6NFI3 1004 aaPredicted RBP14.44□□□□□ -0.1
DEPDC4-203ENST00000416321 SLC52A1Q9NWF4 448 aa14.44□□□□□ -0.1
DEPDC4-203ENST00000416321 SYNMO15061 1565 aa14.43□□□□□ -0.1
DEPDC4-203ENST00000416321 MROH2AA6NES4 1674 aa14.43□□□□□ -0.1
DEPDC4-203ENST00000416321 FER1L4A9Z1Z3 1794 aa14.43□□□□□ -0.1
DEPDC4-203ENST00000416321 ZMYM3Q14202 1370 aa14.43□□□□□ -0.1
DEPDC4-203ENST00000416321 STAC3Q96MF2 364 aa14.42□□□□□ -0.1
DEPDC4-203ENST00000416321 PIK3C2BO00750 1634 aa14.41□□□□□ -0.1
DEPDC4-203ENST00000416321 SPATA31D1Q6ZQQ2 1576 aa14.41□□□□□ -0.1
DEPDC4-203ENST00000416321 ADGRB3O60242 1522 aa14.41□□□□□ -0.1
DEPDC4-203ENST00000416321 UHRF1BP1Q6BDS2 1440 aa14.41□□□□□ -0.1
DEPDC4-203ENST00000416321 FBXO31Q5XUX0 539 aaPredicted RBP14.4□□□□□ -0.1
DEPDC4-203ENST00000416321 RNF39Q9H2S5 420 aa14.4□□□□□ -0.1
DEPDC4-203ENST00000416321 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms