RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 RRP7BPQ9NSQ0 103 aa18.07■□□□□ 0.48
ATG4B-207ENST00000415107 FER1L4A9Z1Z3 1794 aa18.07■□□□□ 0.48
ATG4B-207ENST00000415107 NAIPQ13075 1403 aa18.06■□□□□ 0.48
ATG4B-207ENST00000415107 ZC3H13Q5T200 1668 aaKnown RBP18.06■□□□□ 0.48
ATG4B-207ENST00000415107 MROH2AA6NES4 1674 aa18.06■□□□□ 0.48
ATG4B-207ENST00000415107 KDM4FA0A1W2PPD8 638 aa18.05■□□□□ 0.48
ATG4B-207ENST00000415107 UNC13BO14795 1591 aa18.04■□□□□ 0.48
ATG4B-207ENST00000415107 VWDEQ8N2E2 1590 aa18.04■□□□□ 0.48
ATG4B-207ENST00000415107 KIF3BO15066 747 aa18.03■□□□□ 0.48
ATG4B-207ENST00000415107 LMTK2Q8IWU2 1503 aa18.02■□□□□ 0.47
ATG4B-207ENST00000415107 ITGAEP38570 1179 aa18.01■□□□□ 0.47
ATG4B-207ENST00000415107 RIMS1Q86UR5 1692 aaKnown RBP18■□□□□ 0.47
ATG4B-207ENST00000415107 PTPRMP28827 1452 aa18■□□□□ 0.47
ATG4B-207ENST00000415107 ABCC3O15438 1527 aa17.99■□□□□ 0.47
ATG4B-207ENST00000415107 ACIN1Q9UKV3 1341 aaKnown RBP17.98■□□□□ 0.47
ATG4B-207ENST00000415107 CLTCQ00610 1675 aaKnown RBP17.97■□□□□ 0.47
ATG4B-207ENST00000415107 MLECQ14165 292 aa17.96■□□□□ 0.47
ATG4B-207ENST00000415107 GGT6Q6P531 493 aa17.96■□□□□ 0.47
ATG4B-207ENST00000415107 IQGAP3Q86VI3 1631 aa17.96■□□□□ 0.47
ATG4B-207ENST00000415107 ARHGAP31Q2M1Z3 1444 aa17.95■□□□□ 0.46
ATG4B-207ENST00000415107 KANK1Q14678 1352 aa17.94■□□□□ 0.46
ATG4B-207ENST00000415107 C3P01024 1663 aa17.94■□□□□ 0.46
ATG4B-207ENST00000415107 CAMSAP1Q5T5Y3 1602 aa17.93■□□□□ 0.46
ATG4B-207ENST00000415107 PZPP20742 1482 aa17.93■□□□□ 0.46
ATG4B-207ENST00000415107 CEP152O94986 1710 aa17.92■□□□□ 0.46
ATG4B-207ENST00000415107 NPATQ14207 1427 aa17.92■□□□□ 0.46
ATG4B-207ENST00000415107 SETD5Q9C0A6 1442 aa17.92■□□□□ 0.46
ATG4B-207ENST00000415107 ESF1Q9H501 851 aaKnown RBP17.92■□□□□ 0.46
ATG4B-207ENST00000415107 TET3O43151 1660 aa17.92■□□□□ 0.46
ATG4B-207ENST00000415107 WASHC2CQ9Y4E1 1318 aa17.92■□□□□ 0.46
ATG4B-207ENST00000415107 EFCAB6Q5THR3 1501 aa17.92■□□□□ 0.46
ATG4B-207ENST00000415107 ZMYM3Q14202 1370 aa17.91■□□□□ 0.46
ATG4B-207ENST00000415107 RPRD2Q5VT52 1461 aaKnown RBP17.9■□□□□ 0.46
ATG4B-207ENST00000415107 HRCP23327 699 aa17.9■□□□□ 0.46
ATG4B-207ENST00000415107 TRIM26Q12899 539 aaPredicted RBP17.9■□□□□ 0.46
ATG4B-207ENST00000415107 SPATA31D1Q6ZQQ2 1576 aa17.87■□□□□ 0.45
ATG4B-207ENST00000415107 NUP155O75694 1391 aa17.86■□□□□ 0.45
ATG4B-207ENST00000415107 RAB3GAP2Q9H2M9 1393 aa17.85■□□□□ 0.45
ATG4B-207ENST00000415107 SETD1BQ9UPS6 1966 aaKnown RBP17.85■□□□□ 0.45
ATG4B-207ENST00000415107 ERVK-7P63135 1459 aa17.83■□□□□ 0.45
ATG4B-207ENST00000415107 PREX1Q8TCU6 1659 aa17.83■□□□□ 0.44
ATG4B-207ENST00000415107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.82■□□□□ 0.446e-14■□□□□ 11.2
ATG4B-207ENST00000415107 NOS1P29475 1434 aa17.81■□□□□ 0.44
ATG4B-207ENST00000415107 E9PCH4 1651 aa17.81■□□□□ 0.44
ATG4B-207ENST00000415107 ZNF142P52746 1687 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-207ENST00000415107 MYO3AQ8NEV4 1616 aa17.79■□□□□ 0.44
ATG4B-207ENST00000415107 NLRP1Q9C000 1473 aa17.78■□□□□ 0.44
ATG4B-207ENST00000415107 CEBPAP49715 358 aaPredicted RBP17.78■□□□□ 0.44
ATG4B-207ENST00000415107 TNRQ92752 1358 aa17.77■□□□□ 0.43
ATG4B-207ENST00000415107 PTPRTO14522 1441 aa17.76■□□□□ 0.43
ATG4B-207ENST00000415107 UHRF1BP1Q6BDS2 1440 aa17.76■□□□□ 0.43
ATG4B-207ENST00000415107 LMTK3Q96Q04 1460 aa17.75■□□□□ 0.43
ATG4B-207ENST00000415107 SYNMO15061 1565 aa17.75■□□□□ 0.43
ATG4B-207ENST00000415107 KDM5AP29375 1690 aaKnown RBP17.75■□□□□ 0.43
ATG4B-207ENST00000415107 PIK3C2BO00750 1634 aa17.74■□□□□ 0.43
ATG4B-207ENST00000415107 CEP170BQ9Y4F5 1589 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-207ENST00000415107 SPHKAPQ2M3C7 1700 aa17.73■□□□□ 0.43
ATG4B-207ENST00000415107 A2ML1A8K2U0 1454 aa17.73■□□□□ 0.43
ATG4B-207ENST00000415107 TRPM2O94759 1503 aa17.72■□□□□ 0.43
ATG4B-207ENST00000415107 FBXO31Q5XUX0 539 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-207ENST00000415107 AEBP2Q6ZN18 517 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-207ENST00000415107 TRIM52Q96A61 297 aa17.71■□□□□ 0.43
ATG4B-207ENST00000415107 SLC4A1APQ9BWU0 796 aaKnown RBP17.7■□□□□ 0.42
ATG4B-207ENST00000415107 SLC52A1Q9NWF4 448 aa17.7■□□□□ 0.42
ATG4B-207ENST00000415107 MPHOSPH9Q99550 1183 aa17.69■□□□□ 0.42
ATG4B-207ENST00000415107 PLA2R1Q13018 1463 aa17.68■□□□□ 0.42
ATG4B-207ENST00000415107 PKD2Q13563 968 aa17.67■□□□□ 0.42
ATG4B-207ENST00000415107 CFAP65Q6ZU64 1925 aaKnown RBP17.66■□□□□ 0.42
ATG4B-207ENST00000415107 UBR1Q8IWV7 1749 aa17.66■□□□□ 0.42
ATG4B-207ENST00000415107 ADGRB3O60242 1522 aa17.66■□□□□ 0.42
ATG4B-207ENST00000415107 UGGT1Q9NYU2 1555 aa17.66■□□□□ 0.42
ATG4B-207ENST00000415107 NEURL4Q96JN8 1562 aa17.65■□□□□ 0.42
ATG4B-207ENST00000415107 PLPPR3Q6T4P5 718 aa17.63■□□□□ 0.41
ATG4B-207ENST00000415107 SLIT1O75093 1534 aa17.62■□□□□ 0.41
ATG4B-207ENST00000415107 TMEM131LA2VDJ0 1609 aa17.62■□□□□ 0.41
ATG4B-207ENST00000415107 CLTCL1P53675 1640 aa17.62■□□□□ 0.41
ATG4B-207ENST00000415107 IDI1Q13907 227 aa17.61■□□□□ 0.41
ATG4B-207ENST00000415107 ARHGAP23Q9P227 1491 aa17.61■□□□□ 0.41
ATG4B-207ENST00000415107 ANKRD30BQ9BXX2 1392 aa17.59■□□□□ 0.41
ATG4B-207ENST00000415107 THEMISQ8N1K5 641 aaPredicted RBP17.58■□□□□ 0.4
ATG4B-207ENST00000415107 CCDC144AA2RUR9 1427 aa17.57■□□□□ 0.4
ATG4B-207ENST00000415107 DHX57Q6P158 1386 aaKnown RBP17.56■□□□□ 0.4
ATG4B-207ENST00000415107 PCGF6Q9BYE7 350 aa17.56■□□□□ 0.4
ATG4B-207ENST00000415107 KIF1BO60333 1816 aa17.56■□□□□ 0.4
ATG4B-207ENST00000415107 TMEM2Q9UHN6 1383 aa17.54■□□□□ 0.4
ATG4B-207ENST00000415107 STRCQ7RTU9 1775 aa17.54■□□□□ 0.4
ATG4B-207ENST00000415107 POLR1AO95602 1720 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-207ENST00000415107 MED14O60244 1454 aa17.54■□□□□ 0.4
ATG4B-207ENST00000415107 ZFYVE9O95405 1425 aa17.54■□□□□ 0.4
ATG4B-207ENST00000415107 SPATA31E1Q6ZUB1 1445 aa17.54■□□□□ 0.4
ATG4B-207ENST00000415107 FOXD1Q16676 465 aa17.53■□□□□ 0.4
ATG4B-207ENST00000415107 MYO5BQ9ULV0 1848 aa17.52■□□□□ 0.4
ATG4B-207ENST00000415107 HSPA2P54652 639 aa17.51■□□□□ 0.39
ATG4B-207ENST00000415107 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
ATG4B-207ENST00000415107 NEXMIFQ5QGS0 1516 aa17.49■□□□□ 0.39
ATG4B-207ENST00000415107 STAG3Q9UJ98 1225 aa17.48■□□□□ 0.39
ATG4B-207ENST00000415107 ANKLE2Q86XL3 938 aa17.47■□□□□ 0.39
ATG4B-207ENST00000415107 RIMS2Q9UQ26 1411 aa17.47■□□□□ 0.39
ATG4B-207ENST00000415107 RPGRIP1LQ68CZ1 1315 aa17.47■□□□□ 0.39
ATG4B-207ENST00000415107 IFT172Q9UG01 1749 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms