RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 PZPP20742 1482 aa9.02□□□□□ -0.96
ITGB1-203ENST00000414670 TRHP20396 242 aaPredicted RBP9.02□□□□□ -0.97
ITGB1-203ENST00000414670 NEUROD1Q13562 356 aa9.02□□□□□ -0.97
ITGB1-203ENST00000414670 SIN3AQ96ST3 1273 aa9.02□□□□□ -0.97
ITGB1-203ENST00000414670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.02□□□□□ -0.971e-12■□□□□ 10
ITGB1-203ENST00000414670 PKD2Q13563 968 aa9.01□□□□□ -0.97
ITGB1-203ENST00000414670 KDM5DQ9BY66 1539 aa9□□□□□ -0.97
ITGB1-203ENST00000414670 KIF3BO15066 747 aa9□□□□□ -0.97
ITGB1-203ENST00000414670 TIMELESSQ9UNS1 1208 aa9□□□□□ -0.97
ITGB1-203ENST00000414670 A2MP01023 1474 aa9□□□□□ -0.97
ITGB1-203ENST00000414670 HECW2Q9P2P5 1572 aa8.99□□□□□ -0.97
ITGB1-203ENST00000414670 ANKRD30BQ9BXX2 1392 aa8.99□□□□□ -0.97
ITGB1-203ENST00000414670 PPRC1Q5VV67 1664 aaKnown RBP8.98□□□□□ -0.97
ITGB1-203ENST00000414670 MAGI2Q86UL8 1455 aa8.98□□□□□ -0.97
ITGB1-203ENST00000414670 KANK1Q14678 1352 aa8.98□□□□□ -0.97
ITGB1-203ENST00000414670 YEATS2Q9ULM3 1422 aa8.97□□□□□ -0.97
ITGB1-203ENST00000414670 COL17A1Q9UMD9 1497 aaPredicted RBP8.97□□□□□ -0.97
ITGB1-203ENST00000414670 KIDINS220Q9ULH0 1771 aa8.97□□□□□ -0.97
ITGB1-203ENST00000414670 ZMYM4Q5VZL5 1548 aa8.97□□□□□ -0.97
ITGB1-203ENST00000414670 FAM135AQ9P2D6 1515 aa8.97□□□□□ -0.97
ITGB1-203ENST00000414670 GTF3C3Q9Y5Q9 886 aa8.97□□□□□ -0.97
ITGB1-203ENST00000414670 UNC13BO14795 1591 aa8.97□□□□□ -0.97
ITGB1-203ENST00000414670 KIF13AQ9H1H9 1805 aa8.96□□□□□ -0.97
ITGB1-203ENST00000414670 FRMPD1Q5SYB0 1578 aa8.96□□□□□ -0.97
ITGB1-203ENST00000414670 TONSLQ96HA7 1378 aa8.96□□□□□ -0.98
ITGB1-203ENST00000414670 RICTORQ6R327 1708 aa8.95□□□□□ -0.98
ITGB1-203ENST00000414670 ATP10AO60312 1499 aa8.95□□□□□ -0.98
ITGB1-203ENST00000414670 DIP2CQ9Y2E4 1556 aa8.95□□□□□ -0.98
ITGB1-203ENST00000414670 ABCA6Q8N139 1617 aa8.94□□□□□ -0.98
ITGB1-203ENST00000414670 DIEXFQ68CQ4 756 aaKnown RBP8.94□□□□□ -0.98
ITGB1-203ENST00000414670 GGT6Q6P531 493 aa8.94□□□□□ -0.98
ITGB1-203ENST00000414670 PLPPR3Q6T4P5 718 aa8.94□□□□□ -0.98
ITGB1-203ENST00000414670 EIF2AK4Q9P2K8 1649 aaKnown RBP8.94□□□□□ -0.98
ITGB1-203ENST00000414670 TSPOAP1O95153 1857 aa8.94□□□□□ -0.98
ITGB1-203ENST00000414670 PPP1R15AO75807 674 aaPredicted RBP8.93□□□□□ -0.98
ITGB1-203ENST00000414670 RPRD2Q5VT52 1461 aaKnown RBP8.93□□□□□ -0.98
ITGB1-203ENST00000414670 IQGAP3Q86VI3 1631 aa8.93□□□□□ -0.98
ITGB1-203ENST00000414670 DEPDC5O75140 1603 aa8.91□□□□□ -0.98
ITGB1-203ENST00000414670 VWDEQ8N2E2 1590 aa8.91□□□□□ -0.98
ITGB1-203ENST00000414670 PRDM15P57071 1507 aaPredicted RBP8.91□□□□□ -0.98
ITGB1-203ENST00000414670 WASHC2CQ9Y4E1 1318 aa8.91□□□□□ -0.98
ITGB1-203ENST00000414670 L3MBTL2Q969R5 705 aa8.91□□□□□ -0.98
ITGB1-203ENST00000414670 LMTK3Q96Q04 1460 aa8.9□□□□□ -0.98
ITGB1-203ENST00000414670 MROH1Q8NDA8 1641 aa8.9□□□□□ -0.99
ITGB1-203ENST00000414670 REREQ9P2R6 1566 aa8.9□□□□□ -0.99
ITGB1-203ENST00000414670 LMTK2Q8IWU2 1503 aa8.9□□□□□ -0.99
ITGB1-203ENST00000414670 PLA2R1Q13018 1463 aa8.89□□□□□ -0.99
ITGB1-203ENST00000414670 CCDC144AA2RUR9 1427 aa8.89□□□□□ -0.99
ITGB1-203ENST00000414670 RNF17Q9BXT8 1623 aaKnown RBP8.89□□□□□ -0.99
ITGB1-203ENST00000414670 AGLP35573 1532 aa8.89□□□□□ -0.99
ITGB1-203ENST00000414670 ARHGEF40Q8TER5 1519 aa8.88□□□□□ -0.99
ITGB1-203ENST00000414670 BCORL1Q5H9F3 1711 aa8.88□□□□□ -0.99
ITGB1-203ENST00000414670 PTPRTO14522 1441 aa8.88□□□□□ -0.99
ITGB1-203ENST00000414670 ABCC3O15438 1527 aa8.87□□□□□ -0.99
ITGB1-203ENST00000414670 TET3O43151 1660 aa8.86□□□□□ -0.99
ITGB1-203ENST00000414670 MLECQ14165 292 aa8.86□□□□□ -0.99
ITGB1-203ENST00000414670 EFCAB6Q5THR3 1501 aa8.85□□□□□ -0.99
ITGB1-203ENST00000414670 ARID4BQ4LE39 1312 aaPredicted RBP8.85□□□□□ -0.99
ITGB1-203ENST00000414670 ZNF316A6NFI3 1004 aaPredicted RBP8.85□□□□□ -0.99
ITGB1-203ENST00000414670 NPATQ14207 1427 aa8.85□□□□□ -0.99
ITGB1-203ENST00000414670 ARHGAP31Q2M1Z3 1444 aa8.85□□□□□ -0.99
ITGB1-203ENST00000414670 RGL3Q3MIN7 710 aa8.84□□□□□ -0.99
ITGB1-203ENST00000414670 ESF1Q9H501 851 aaKnown RBP8.84□□□□□ -0.99
ITGB1-203ENST00000414670 TRPM2O94759 1503 aa8.84□□□□□ -0.99
ITGB1-203ENST00000414670 CNTLNQ9NXG0 1405 aa8.83□□□□□ -1
ITGB1-203ENST00000414670 DCAF11Q8TEB1 546 aa8.83□□□□□ -1
ITGB1-203ENST00000414670 E9PCH4 1651 aa8.83□□□□□ -1
ITGB1-203ENST00000414670 NBPF8Q3BBV2 869 aa8.82□□□□□ -1
ITGB1-203ENST00000414670 NOS1P29475 1434 aa8.81□□□□□ -1
ITGB1-203ENST00000414670 SPATA31E1Q6ZUB1 1445 aa8.81□□□□□ -1
ITGB1-203ENST00000414670 ZNF326Q5BKZ1 582 aaKnown RBP8.81□□□□□ -1
ITGB1-203ENST00000414670 KDM2AQ9Y2K7 1162 aa8.81□□□□□ -1
ITGB1-203ENST00000414670 STAC3Q96MF2 364 aa8.8□□□□□ -1
ITGB1-203ENST00000414670 SLC52A1Q9NWF4 448 aa8.8□□□□□ -1
ITGB1-203ENST00000414670 DMRT2Q9Y5R5 561 aa8.8□□□□□ -1
ITGB1-203ENST00000414670 ZC3H13Q5T200 1668 aaKnown RBP8.8□□□□□ -1
ITGB1-203ENST00000414670 UHRF1BP1Q6BDS2 1440 aa8.8□□□□□ -1
ITGB1-203ENST00000414670 CHGAP10645 457 aaKnown RBP8.79□□□□□ -1
ITGB1-203ENST00000414670 FBXO31Q5XUX0 539 aaPredicted RBP8.79□□□□□ -1
ITGB1-203ENST00000414670 CEP152O94986 1710 aa8.79□□□□□ -1
ITGB1-203ENST00000414670 CAMSAP1Q5T5Y3 1602 aa8.79□□□□□ -1
ITGB1-203ENST00000414670 ZMYM3Q14202 1370 aa8.78□□□□□ -1
ITGB1-203ENST00000414670 SIGLEC1Q9BZZ2 1709 aa8.78□□□□□ -1
ITGB1-203ENST00000414670 IDI1Q13907 227 aa8.78□□□□□ -1
ITGB1-203ENST00000414670 CLTCL1P53675 1640 aa8.78□□□□□ -1
ITGB1-203ENST00000414670 UGGT1Q9NYU2 1555 aa8.78□□□□□ -1
ITGB1-203ENST00000414670 ERVK-7P63135 1459 aa8.77□□□□□ -1
ITGB1-203ENST00000414670 SPHKAPQ2M3C7 1700 aa8.77□□□□□ -1
ITGB1-203ENST00000414670 EIF4G2P78344 907 aaKnown RBP eCLIP8.77□□□□□ -1.01
ITGB1-203ENST00000414670 NEURL4Q96JN8 1562 aa8.77□□□□□ -1.01
ITGB1-203ENST00000414670 PRAG1Q86YV5 1406 aa8.76□□□□□ -1.01
ITGB1-203ENST00000414670 RPGRIP1LQ68CZ1 1315 aa8.76□□□□□ -1.01
ITGB1-203ENST00000414670 HSPA5P11021 654 aaKnown RBP8.75□□□□□ -1.01
ITGB1-203ENST00000414670 RALGAPBQ86X10 1494 aa8.75□□□□□ -1.01
ITGB1-203ENST00000414670 SYNMO15061 1565 aa8.74□□□□□ -1.01
ITGB1-203ENST00000414670 HIRIP3Q9BW71 556 aaPredicted RBP8.74□□□□□ -1.01
ITGB1-203ENST00000414670 CARD11Q9BXL7 1154 aa8.74□□□□□ -1.01
ITGB1-203ENST00000414670 ADGRB3O60242 1522 aa8.74□□□□□ -1.01
ITGB1-203ENST00000414670 ROCK2O75116 1388 aaKnown RBP8.73□□□□□ -1.01
ITGB1-203ENST00000414670 CLTCQ00610 1675 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms