RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 ERBINQ96RT1 1412 aa16.57■□□□□ 0.24
LINC00330-201ENST00000414562 MROH1Q8NDA8 1641 aa16.56■□□□□ 0.24
LINC00330-201ENST00000414562 KIF3BO15066 747 aa16.56■□□□□ 0.24
LINC00330-201ENST00000414562 PZPP20742 1482 aa16.53■□□□□ 0.24
LINC00330-201ENST00000414562 REREQ9P2R6 1566 aa16.53■□□□□ 0.24
LINC00330-201ENST00000414562 DEPDC5O75140 1603 aa16.52■□□□□ 0.24
LINC00330-201ENST00000414562 UNC13BO14795 1591 aa16.52■□□□□ 0.24
LINC00330-201ENST00000414562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.52■□□□□ 0.24
LINC00330-201ENST00000414562 BCORL1Q5H9F3 1711 aa16.52■□□□□ 0.24
LINC00330-201ENST00000414562 EIF2AK4Q9P2K8 1649 aaKnown RBP16.52■□□□□ 0.24
LINC00330-201ENST00000414562 TRIM52Q96A61 297 aa16.52■□□□□ 0.23
LINC00330-201ENST00000414562 RNF17Q9BXT8 1623 aaKnown RBP16.5■□□□□ 0.23
LINC00330-201ENST00000414562 NUP155O75694 1391 aa16.49■□□□□ 0.23
LINC00330-201ENST00000414562 AGLP35573 1532 aa16.49■□□□□ 0.23
LINC00330-201ENST00000414562 GGT6Q6P531 493 aa16.49■□□□□ 0.23
LINC00330-201ENST00000414562 FOXD1Q16676 465 aa16.48■□□□□ 0.23
LINC00330-201ENST00000414562 VWDEQ8N2E2 1590 aa16.48■□□□□ 0.23
LINC00330-201ENST00000414562 PRKCSHP14314 528 aaPredicted RBP16.48■□□□□ 0.23
LINC00330-201ENST00000414562 KDM5DQ9BY66 1539 aa16.47■□□□□ 0.23
LINC00330-201ENST00000414562 MPHOSPH9Q99550 1183 aa16.47■□□□□ 0.23
LINC00330-201ENST00000414562 PRDM15P57071 1507 aaPredicted RBP16.47■□□□□ 0.23
LINC00330-201ENST00000414562 MLECQ14165 292 aa16.46■□□□□ 0.23
LINC00330-201ENST00000414562 IQGAP3Q86VI3 1631 aa16.46■□□□□ 0.22
LINC00330-201ENST00000414562 FAM135AQ9P2D6 1515 aa16.46■□□□□ 0.22
LINC00330-201ENST00000414562 CEP152O94986 1710 aa16.45■□□□□ 0.22
LINC00330-201ENST00000414562 SLC4A1APQ9BWU0 796 aaKnown RBP16.43■□□□□ 0.22
LINC00330-201ENST00000414562 ARID4BQ4LE39 1312 aaPredicted RBP16.42■□□□□ 0.22
LINC00330-201ENST00000414562 ABCC3O15438 1527 aa16.41■□□□□ 0.22
LINC00330-201ENST00000414562 PKD2Q13563 968 aa16.41■□□□□ 0.22
LINC00330-201ENST00000414562 E9PCH4 1651 aa16.4■□□□□ 0.22
LINC00330-201ENST00000414562 CFAP65Q6ZU64 1925 aaKnown RBP16.39■□□□□ 0.21
LINC00330-201ENST00000414562 CLTCQ00610 1675 aaKnown RBP16.38■□□□□ 0.21
LINC00330-201ENST00000414562 PLA2R1Q13018 1463 aa16.38■□□□□ 0.21
LINC00330-201ENST00000414562 LMTK2Q8IWU2 1503 aa16.38■□□□□ 0.21
LINC00330-201ENST00000414562 ACIN1Q9UKV3 1341 aaKnown RBP16.38■□□□□ 0.21
LINC00330-201ENST00000414562 TET3O43151 1660 aa16.37■□□□□ 0.21
LINC00330-201ENST00000414562 WASHC2CQ9Y4E1 1318 aa16.37■□□□□ 0.21
LINC00330-201ENST00000414562 SIN3AQ96ST3 1273 aa16.36■□□□□ 0.21
LINC00330-201ENST00000414562 CAMSAP1Q5T5Y3 1602 aa16.35■□□□□ 0.21
LINC00330-201ENST00000414562 KANK1Q14678 1352 aa16.35■□□□□ 0.21
LINC00330-201ENST00000414562 ANKRD30BQ9BXX2 1392 aa16.35■□□□□ 0.21
LINC00330-201ENST00000414562 NEUROD1Q13562 356 aa16.35■□□□□ 0.21
LINC00330-201ENST00000414562 EFCAB6Q5THR3 1501 aa16.35■□□□□ 0.21
LINC00330-201ENST00000414562 NPATQ14207 1427 aa16.34■□□□□ 0.21
LINC00330-201ENST00000414562 FBXO31Q5XUX0 539 aaPredicted RBP16.33■□□□□ 0.2
LINC00330-201ENST00000414562 ADAMTSL3P82987 1691 aa16.32■□□□□ 0.2
LINC00330-201ENST00000414562 MADDQ8WXG6 1647 aa16.32■□□□□ 0.2
LINC00330-201ENST00000414562 ZC3H13Q5T200 1668 aaKnown RBP16.31■□□□□ 0.2
LINC00330-201ENST00000414562 ERICH6Q7L0X2 663 aa16.31■□□□□ 0.2
LINC00330-201ENST00000414562 CEBPAP49715 358 aaPredicted RBP16.31■□□□□ 0.2
LINC00330-201ENST00000414562 FER1L4A9Z1Z3 1794 aa16.3■□□□□ 0.2
LINC00330-201ENST00000414562 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
LINC00330-201ENST00000414562 UGGT1Q9NYU2 1555 aa16.29■□□□□ 0.2
LINC00330-201ENST00000414562 ZMYM3Q14202 1370 aa16.29■□□□□ 0.2
LINC00330-201ENST00000414562 PTPRTO14522 1441 aa16.29■□□□□ 0.2
LINC00330-201ENST00000414562 ARHGAP31Q2M1Z3 1444 aa16.28■□□□□ 0.2
LINC00330-201ENST00000414562 SPHKAPQ2M3C7 1700 aa16.27■□□□□ 0.2
LINC00330-201ENST00000414562 RIMS1Q86UR5 1692 aaKnown RBP16.27■□□□□ 0.19
LINC00330-201ENST00000414562 SYNMO15061 1565 aa16.26■□□□□ 0.19
LINC00330-201ENST00000414562 NOS1P29475 1434 aa16.26■□□□□ 0.19
LINC00330-201ENST00000414562 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
LINC00330-201ENST00000414562 C3P01024 1663 aa16.26■□□□□ 0.19
LINC00330-201ENST00000414562 PREX1Q8TCU6 1659 aa16.26■□□□□ 0.19
LINC00330-201ENST00000414562 KDM4FA0A1W2PPD8 638 aa16.25■□□□□ 0.19
LINC00330-201ENST00000414562 TIMELESSQ9UNS1 1208 aa16.25■□□□□ 0.19
LINC00330-201ENST00000414562 CLTCL1P53675 1640 aa16.24■□□□□ 0.19
LINC00330-201ENST00000414562 MROH2AA6NES4 1674 aa16.24■□□□□ 0.19
LINC00330-201ENST00000414562 RPRD2Q5VT52 1461 aaKnown RBP16.24■□□□□ 0.19
LINC00330-201ENST00000414562 PLPPR3Q6T4P5 718 aa16.23■□□□□ 0.19
LINC00330-201ENST00000414562 ERVK-7P63135 1459 aa16.23■□□□□ 0.19
LINC00330-201ENST00000414562 TRPM2O94759 1503 aa16.22■□□□□ 0.19
LINC00330-201ENST00000414562 TONSLQ96HA7 1378 aa16.22■□□□□ 0.19
LINC00330-201ENST00000414562 CNTLNQ9NXG0 1405 aa16.21■□□□□ 0.19
LINC00330-201ENST00000414562 SPATA31D1Q6ZQQ2 1576 aa16.21■□□□□ 0.19
LINC00330-201ENST00000414562 ESF1Q9H501 851 aaKnown RBP16.2■□□□□ 0.18
LINC00330-201ENST00000414562 PIK3C2BO00750 1634 aa16.19■□□□□ 0.18
LINC00330-201ENST00000414562 IDI1Q13907 227 aa16.19■□□□□ 0.18
LINC00330-201ENST00000414562 PTPRMP28827 1452 aa16.17■□□□□ 0.18
LINC00330-201ENST00000414562 CCDC144AA2RUR9 1427 aa16.16■□□□□ 0.18
LINC00330-201ENST00000414562 SPATA31E1Q6ZUB1 1445 aa16.16■□□□□ 0.18
LINC00330-201ENST00000414562 MYO5BQ9ULV0 1848 aa16.16■□□□□ 0.18
LINC00330-201ENST00000414562 PPP1R15AO75807 674 aaPredicted RBP16.14■□□□□ 0.17
LINC00330-201ENST00000414562 L3MBTL2Q969R5 705 aa16.14■□□□□ 0.17
LINC00330-201ENST00000414562 TNRQ92752 1358 aa16.14■□□□□ 0.17
LINC00330-201ENST00000414562 RGL3Q3MIN7 710 aa16.13■□□□□ 0.17
LINC00330-201ENST00000414562 DIEXFQ68CQ4 756 aaKnown RBP16.13■□□□□ 0.17
LINC00330-201ENST00000414562 TMEM131LA2VDJ0 1609 aa16.11■□□□□ 0.17
LINC00330-201ENST00000414562 KIF1BO60333 1816 aa16.11■□□□□ 0.17
LINC00330-201ENST00000414562 ADGRB3O60242 1522 aa16.1■□□□□ 0.17
LINC00330-201ENST00000414562 SLC52A1Q9NWF4 448 aa16.09■□□□□ 0.17
LINC00330-201ENST00000414562 CHGAP10645 457 aaKnown RBP16.09■□□□□ 0.17
LINC00330-201ENST00000414562 MYO3AQ8NEV4 1616 aa16.07■□□□□ 0.16
LINC00330-201ENST00000414562 SETD1BQ9UPS6 1966 aaKnown RBP16.07■□□□□ 0.16
LINC00330-201ENST00000414562 A2ML1A8K2U0 1454 aa16.07■□□□□ 0.16
LINC00330-201ENST00000414562 UBR1Q8IWV7 1749 aa16.06■□□□□ 0.16
LINC00330-201ENST00000414562 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
LINC00330-201ENST00000414562 NUTM2DQ5VT03 806 aaPredicted RBP16.05■□□□□ 0.16
LINC00330-201ENST00000414562 KDM2AQ9Y2K7 1162 aa16.05■□□□□ 0.16
LINC00330-201ENST00000414562 IFT172Q9UG01 1749 aa16.05■□□□□ 0.16
LINC00330-201ENST00000414562 DCAF11Q8TEB1 546 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms