RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 TRIM52Q96A61 297 aa22.81■■□□□ 1.24
LINC00116-201ENST00000414416 RNF17Q9BXT8 1623 aaKnown RBP22.8■■□□□ 1.24
LINC00116-201ENST00000414416 GGT6Q6P531 493 aa22.8■■□□□ 1.24
LINC00116-201ENST00000414416 DEPDC5O75140 1603 aa22.8■■□□□ 1.24
LINC00116-201ENST00000414416 UNC13BO14795 1591 aa22.8■■□□□ 1.24
LINC00116-201ENST00000414416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.8■■□□□ 1.24
LINC00116-201ENST00000414416 NUP155O75694 1391 aa22.77■■□□□ 1.24
LINC00116-201ENST00000414416 PELP1Q8IZL8 1130 aaKnown RBP22.77■■□□□ 1.24
LINC00116-201ENST00000414416 PRDM15P57071 1507 aaPredicted RBP22.76■■□□□ 1.23
LINC00116-201ENST00000414416 MROH1Q8NDA8 1641 aa22.76■■□□□ 1.23
LINC00116-201ENST00000414416 MLECQ14165 292 aa22.75■■□□□ 1.23
LINC00116-201ENST00000414416 KANK1Q14678 1352 aa22.75■■□□□ 1.23
LINC00116-201ENST00000414416 KDM5DQ9BY66 1539 aa22.73■■□□□ 1.23
LINC00116-201ENST00000414416 PPP6R1Q9UPN7 881 aa22.7■■□□□ 1.23
LINC00116-201ENST00000414416 IQGAP3Q86VI3 1631 aa22.7■■□□□ 1.22
LINC00116-201ENST00000414416 VWDEQ8N2E2 1590 aa22.7■■□□□ 1.22
LINC00116-201ENST00000414416 FAM135AQ9P2D6 1515 aa22.7■■□□□ 1.22
LINC00116-201ENST00000414416 WASHC2CQ9Y4E1 1318 aa22.7■■□□□ 1.22
LINC00116-201ENST00000414416 PZPP20742 1482 aa22.69■■□□□ 1.22
LINC00116-201ENST00000414416 SLC4A1APQ9BWU0 796 aaKnown RBP22.68■■□□□ 1.22
LINC00116-201ENST00000414416 MPHOSPH9Q99550 1183 aa22.67■■□□□ 1.22
LINC00116-201ENST00000414416 ABCC3O15438 1527 aa22.66■■□□□ 1.22
LINC00116-201ENST00000414416 ZC3H13Q5T200 1668 aaKnown RBP22.66■■□□□ 1.22
LINC00116-201ENST00000414416 CEP152O94986 1710 aa22.65■■□□□ 1.22
LINC00116-201ENST00000414416 ESF1Q9H501 851 aaKnown RBP22.65■■□□□ 1.22
LINC00116-201ENST00000414416 LMTK2Q8IWU2 1503 aa22.65■■□□□ 1.22
LINC00116-201ENST00000414416 DHX57Q6P158 1386 aaKnown RBP22.63■■□□□ 1.21
LINC00116-201ENST00000414416 TET3O43151 1660 aa22.62■■□□□ 1.21
LINC00116-201ENST00000414416 CLTCQ00610 1675 aaKnown RBP22.61■■□□□ 1.21
LINC00116-201ENST00000414416 CCER1Q8TC90 406 aaPredicted RBP22.61■■□□□ 1.21
LINC00116-201ENST00000414416 PKD2Q13563 968 aa22.6■■□□□ 1.21
LINC00116-201ENST00000414416 CNTLNQ9NXG0 1405 aa22.6■■□□□ 1.21
LINC00116-201ENST00000414416 FER1L4A9Z1Z3 1794 aa22.59■■□□□ 1.21
LINC00116-201ENST00000414416 CAMSAP1Q5T5Y3 1602 aa22.59■■□□□ 1.21
LINC00116-201ENST00000414416 EFCAB6Q5THR3 1501 aa22.59■■□□□ 1.21
LINC00116-201ENST00000414416 ADAMTSL3P82987 1691 aa22.58■■□□□ 1.2
LINC00116-201ENST00000414416 MADDQ8WXG6 1647 aa22.56■■□□□ 1.2
LINC00116-201ENST00000414416 FOXD1Q16676 465 aa22.56■■□□□ 1.2
LINC00116-201ENST00000414416 E9PCH4 1651 aa22.55■■□□□ 1.2
LINC00116-201ENST00000414416 ARHGAP31Q2M1Z3 1444 aa22.55■■□□□ 1.2
LINC00116-201ENST00000414416 NPATQ14207 1427 aa22.54■■□□□ 1.2
LINC00116-201ENST00000414416 ZMYM3Q14202 1370 aa22.54■■□□□ 1.2
LINC00116-201ENST00000414416 MROH2AA6NES4 1674 aa22.54■■□□□ 1.2
LINC00116-201ENST00000414416 RPRD2Q5VT52 1461 aaKnown RBP22.53■■□□□ 1.2
LINC00116-201ENST00000414416 RIMS1Q86UR5 1692 aaKnown RBP22.52■■□□□ 1.2
LINC00116-201ENST00000414416 ZEB1P37275 1124 aaPredicted RBP22.48■■□□□ 1.19
LINC00116-201ENST00000414416 CFAP65Q6ZU64 1925 aaKnown RBP22.47■■□□□ 1.19
LINC00116-201ENST00000414416 C3P01024 1663 aa22.46■■□□□ 1.19
LINC00116-201ENST00000414416 ANKRD30BQ9BXX2 1392 aa22.45■■□□□ 1.19
LINC00116-201ENST00000414416 CEBPAP49715 358 aaPredicted RBP22.45■■□□□ 1.18
LINC00116-201ENST00000414416 FBXO31Q5XUX0 539 aaPredicted RBP22.45■■□□□ 1.18
LINC00116-201ENST00000414416 PTPRTO14522 1441 aa22.45■■□□□ 1.18
LINC00116-201ENST00000414416 SPHKAPQ2M3C7 1700 aa22.44■■□□□ 1.18
LINC00116-201ENST00000414416 PREX1Q8TCU6 1659 aa22.44■■□□□ 1.18
LINC00116-201ENST00000414416 ERVK-7P63135 1459 aa22.44■■□□□ 1.18
LINC00116-201ENST00000414416 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
LINC00116-201ENST00000414416 CLSPNQ9HAW4 1339 aa22.43■■□□□ 1.18
LINC00116-201ENST00000414416 NOS1P29475 1434 aa22.43■■□□□ 1.18
LINC00116-201ENST00000414416 PLA2R1Q13018 1463 aa22.43■■□□□ 1.18
LINC00116-201ENST00000414416 KDM4FA0A1W2PPD8 638 aa22.43■■□□□ 1.18
LINC00116-201ENST00000414416 PTPRMP28827 1452 aa22.41■■□□□ 1.18
LINC00116-201ENST00000414416 TRPM2O94759 1503 aa22.41■■□□□ 1.18
LINC00116-201ENST00000414416 SPATA31D1Q6ZQQ2 1576 aa22.41■■□□□ 1.18
LINC00116-201ENST00000414416 CCDC144AA2RUR9 1427 aa22.39■■□□□ 1.17
LINC00116-201ENST00000414416 SYNMO15061 1565 aa22.38■■□□□ 1.17
LINC00116-201ENST00000414416 TNRQ92752 1358 aa22.36■■□□□ 1.17
LINC00116-201ENST00000414416 SIN3AQ96ST3 1273 aa22.36■■□□□ 1.17
LINC00116-201ENST00000414416 UGGT1Q9NYU2 1555 aa22.35■■□□□ 1.17
LINC00116-201ENST00000414416 SLC52A1Q9NWF4 448 aa22.34■■□□□ 1.17
LINC00116-201ENST00000414416 CLTCL1P53675 1640 aa22.34■■□□□ 1.17
LINC00116-201ENST00000414416 NEUROD1Q13562 356 aa22.33■■□□□ 1.17
LINC00116-201ENST00000414416 PIK3C2BO00750 1634 aa22.32■■□□□ 1.16
LINC00116-201ENST00000414416 IDI1Q13907 227 aa22.31■■□□□ 1.16
LINC00116-201ENST00000414416 NLRP1Q9C000 1473 aa22.28■■□□□ 1.16
LINC00116-201ENST00000414416 KIF1BO60333 1816 aa22.26■■□□□ 1.15
LINC00116-201ENST00000414416 CHGAP10645 457 aaKnown RBP22.26■■□□□ 1.15
LINC00116-201ENST00000414416 SETD1BQ9UPS6 1966 aaKnown RBP22.25■■□□□ 1.15
LINC00116-201ENST00000414416 MYO3AQ8NEV4 1616 aa22.25■■□□□ 1.15
LINC00116-201ENST00000414416 STAG3Q9UJ98 1225 aa22.24■■□□□ 1.15
LINC00116-201ENST00000414416 SPATA31E1Q6ZUB1 1445 aa22.22■■□□□ 1.15
LINC00116-201ENST00000414416 ADGRB3O60242 1522 aa22.21■■□□□ 1.15
LINC00116-201ENST00000414416 RGL3Q3MIN7 710 aa22.21■■□□□ 1.15
LINC00116-201ENST00000414416 TONSLQ96HA7 1378 aa22.21■■□□□ 1.15
LINC00116-201ENST00000414416 MYT1Q01538 1121 aa22.21■■□□□ 1.15
LINC00116-201ENST00000414416 TMEM131LA2VDJ0 1609 aa22.21■■□□□ 1.15
LINC00116-201ENST00000414416 NEURL4Q96JN8 1562 aa22.2■■□□□ 1.15
LINC00116-201ENST00000414416 A2ML1A8K2U0 1454 aa22.2■■□□□ 1.14
LINC00116-201ENST00000414416 UHRF1BP1Q6BDS2 1440 aa22.19■■□□□ 1.14
LINC00116-201ENST00000414416 CEP170BQ9Y4F5 1589 aaPredicted RBP22.19■■□□□ 1.14
LINC00116-201ENST00000414416 KDM5AP29375 1690 aaKnown RBP22.18■■□□□ 1.14
LINC00116-201ENST00000414416 ZNF326Q5BKZ1 582 aaKnown RBP22.18■■□□□ 1.14
LINC00116-201ENST00000414416 UBR1Q8IWV7 1749 aa22.17■■□□□ 1.14
LINC00116-201ENST00000414416 MYO5BQ9ULV0 1848 aa22.17■■□□□ 1.14
LINC00116-201ENST00000414416 ZNF142P52746 1687 aaPredicted RBP22.17■■□□□ 1.14
LINC00116-201ENST00000414416 TIMELESSQ9UNS1 1208 aa22.16■■□□□ 1.14
LINC00116-201ENST00000414416 L3MBTL2Q969R5 705 aa22.15■■□□□ 1.14
LINC00116-201ENST00000414416 THEMISQ8N1K5 641 aaPredicted RBP22.13■■□□□ 1.13
LINC00116-201ENST00000414416 RPGRIP1LQ68CZ1 1315 aa22.12■■□□□ 1.13
LINC00116-201ENST00000414416 DCAF11Q8TEB1 546 aa22.11■■□□□ 1.13
LINC00116-201ENST00000414416 TMEM2Q9UHN6 1383 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms