RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 FAM135AQ9P2D6 1515 aa24.96■■□□□ 1.59
LINC00398-201ENST00000414407 ANKRD50Q9ULJ7 1429 aa24.95■■□□□ 1.59
LINC00398-201ENST00000414407 RNF17Q9BXT8 1623 aaKnown RBP24.95■■□□□ 1.58
LINC00398-201ENST00000414407 AEBP2Q6ZN18 517 aaPredicted RBP24.95■■□□□ 1.58
LINC00398-201ENST00000414407 RIMS1Q86UR5 1692 aaKnown RBP24.94■■□□□ 1.58
LINC00398-201ENST00000414407 KDM5DQ9BY66 1539 aa24.88■■□□□ 1.57
LINC00398-201ENST00000414407 MROH2AA6NES4 1674 aa24.88■■□□□ 1.57
LINC00398-201ENST00000414407 WASHC2CQ9Y4E1 1318 aa24.87■■□□□ 1.57
LINC00398-201ENST00000414407 DEPDC5O75140 1603 aa24.87■■□□□ 1.57
LINC00398-201ENST00000414407 MROH1Q8NDA8 1641 aa24.87■■□□□ 1.57
LINC00398-201ENST00000414407 PRDM15P57071 1507 aaPredicted RBP24.86■■□□□ 1.57
LINC00398-201ENST00000414407 ZMYM3Q14202 1370 aa24.86■■□□□ 1.57
LINC00398-201ENST00000414407 HFM1A2PYH4 1435 aa24.86■■□□□ 1.57
LINC00398-201ENST00000414407 NAIPQ13075 1403 aa24.85■■□□□ 1.57
LINC00398-201ENST00000414407 CLTCQ00610 1675 aaKnown RBP24.84■■□□□ 1.57
LINC00398-201ENST00000414407 KANK1Q14678 1352 aa24.83■■□□□ 1.57
LINC00398-201ENST00000414407 ZC3H13Q5T200 1668 aaKnown RBP24.82■■□□□ 1.56
LINC00398-201ENST00000414407 ABCC3O15438 1527 aa24.81■■□□□ 1.56
LINC00398-201ENST00000414407 CEBPAP49715 358 aaPredicted RBP24.8■■□□□ 1.56
LINC00398-201ENST00000414407 VWDEQ8N2E2 1590 aa24.8■■□□□ 1.56
LINC00398-201ENST00000414407 C3P01024 1663 aa24.79■■□□□ 1.56
LINC00398-201ENST00000414407 GCC2Q8IWJ2 1684 aa24.79■■□□□ 1.56
LINC00398-201ENST00000414407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.79■■□□□ 1.56
LINC00398-201ENST00000414407 LMTK2Q8IWU2 1503 aa24.77■■□□□ 1.56
LINC00398-201ENST00000414407 UNC13BO14795 1591 aa24.77■■□□□ 1.56
LINC00398-201ENST00000414407 NPATQ14207 1427 aa24.77■■□□□ 1.56
LINC00398-201ENST00000414407 PZPP20742 1482 aa24.75■■□□□ 1.55
LINC00398-201ENST00000414407 PLPPR3Q6T4P5 718 aa24.74■■□□□ 1.55
LINC00398-201ENST00000414407 ARHGAP31Q2M1Z3 1444 aa24.74■■□□□ 1.55
LINC00398-201ENST00000414407 CEP152O94986 1710 aa24.71■■□□□ 1.55
LINC00398-201ENST00000414407 ACIN1Q9UKV3 1341 aaKnown RBP24.7■■□□□ 1.54
LINC00398-201ENST00000414407 CAMSAP1Q5T5Y3 1602 aa24.7■■□□□ 1.54
LINC00398-201ENST00000414407 SETD1BQ9UPS6 1966 aaKnown RBP24.7■■□□□ 1.54
LINC00398-201ENST00000414407 NUP155O75694 1391 aa24.69■■□□□ 1.54
LINC00398-201ENST00000414407 IQGAP3Q86VI3 1631 aa24.67■■□□□ 1.54
LINC00398-201ENST00000414407 SETD5Q9C0A6 1442 aa24.67■■□□□ 1.54
LINC00398-201ENST00000414407 FBXO31Q5XUX0 539 aaPredicted RBP24.65■■□□□ 1.54
LINC00398-201ENST00000414407 EFCAB6Q5THR3 1501 aa24.65■■□□□ 1.54
LINC00398-201ENST00000414407 TET3O43151 1660 aa24.64■■□□□ 1.53
LINC00398-201ENST00000414407 RPRD2Q5VT52 1461 aaKnown RBP24.63■■□□□ 1.53
LINC00398-201ENST00000414407 SPATA31D1Q6ZQQ2 1576 aa24.63■■□□□ 1.53
LINC00398-201ENST00000414407 PREX1Q8TCU6 1659 aa24.62■■□□□ 1.53
LINC00398-201ENST00000414407 UHRF1BP1Q6BDS2 1440 aa24.62■■□□□ 1.53
LINC00398-201ENST00000414407 TNRQ92752 1358 aa24.62■■□□□ 1.53
LINC00398-201ENST00000414407 ERVK-7P63135 1459 aa24.62■■□□□ 1.53
LINC00398-201ENST00000414407 LMTK3Q96Q04 1460 aa24.61■■□□□ 1.53
LINC00398-201ENST00000414407 HRCP23327 699 aa24.59■■□□□ 1.53
LINC00398-201ENST00000414407 TRIM26Q12899 539 aaPredicted RBP24.59■■□□□ 1.53
LINC00398-201ENST00000414407 TRIM52Q96A61 297 aa24.59■■□□□ 1.53
LINC00398-201ENST00000414407 RAB3GAP2Q9H2M9 1393 aa24.56■■□□□ 1.52
LINC00398-201ENST00000414407 NLRP1Q9C000 1473 aa24.56■■□□□ 1.52
LINC00398-201ENST00000414407 NOS1P29475 1434 aa24.55■■□□□ 1.52
LINC00398-201ENST00000414407 MYO3AQ8NEV4 1616 aa24.54■■□□□ 1.52
LINC00398-201ENST00000414407 A2ML1A8K2U0 1454 aa24.52■■□□□ 1.52
LINC00398-201ENST00000414407 E9PCH4 1651 aa24.52■■□□□ 1.52
LINC00398-201ENST00000414407 ZNF142P52746 1687 aaPredicted RBP24.51■■□□□ 1.51
LINC00398-201ENST00000414407 SLC4A1APQ9BWU0 796 aaKnown RBP24.5■■□□□ 1.51
LINC00398-201ENST00000414407 CEP170BQ9Y4F5 1589 aaPredicted RBP24.5■■□□□ 1.51
LINC00398-201ENST00000414407 CFAP65Q6ZU64 1925 aaKnown RBP24.49■■□□□ 1.51
LINC00398-201ENST00000414407 SLC52A1Q9NWF4 448 aa24.48■■□□□ 1.51
LINC00398-201ENST00000414407 SYNMO15061 1565 aa24.46■■□□□ 1.51
LINC00398-201ENST00000414407 PKD2Q13563 968 aa24.46■■□□□ 1.51
LINC00398-201ENST00000414407 MPHOSPH9Q99550 1183 aa24.46■■□□□ 1.51
LINC00398-201ENST00000414407 PTPRTO14522 1441 aa24.45■■□□□ 1.51
LINC00398-201ENST00000414407 HSPA2P54652 639 aa24.45■■□□□ 1.5
LINC00398-201ENST00000414407 IDI1Q13907 227 aa24.43■■□□□ 1.5
LINC00398-201ENST00000414407 THEMISQ8N1K5 641 aaPredicted RBP24.43■■□□□ 1.5
LINC00398-201ENST00000414407 UGGT1Q9NYU2 1555 aa24.42■■□□□ 1.5
LINC00398-201ENST00000414407 PLA2R1Q13018 1463 aa24.4■■□□□ 1.5
LINC00398-201ENST00000414407 PIK3C2BO00750 1634 aa24.39■■□□□ 1.49
LINC00398-201ENST00000414407 KDM5AP29375 1690 aaKnown RBP24.38■■□□□ 1.49
LINC00398-201ENST00000414407 SPHKAPQ2M3C7 1700 aa24.38■■□□□ 1.49
LINC00398-201ENST00000414407 TRPM2O94759 1503 aa24.36■■□□□ 1.49
LINC00398-201ENST00000414407 UBR1Q8IWV7 1749 aa24.35■■□□□ 1.49
LINC00398-201ENST00000414407 STAG3Q9UJ98 1225 aa24.35■■□□□ 1.49
LINC00398-201ENST00000414407 ADGRB3O60242 1522 aa24.33■■□□□ 1.49
LINC00398-201ENST00000414407 FOXD1Q16676 465 aa24.31■■□□□ 1.48
LINC00398-201ENST00000414407 DMRT2Q9Y5R5 561 aa24.3■■□□□ 1.48
LINC00398-201ENST00000414407 ARHGAP23Q9P227 1491 aa24.3■■□□□ 1.48
LINC00398-201ENST00000414407 SLIT1O75093 1534 aa24.3■■□□□ 1.48
LINC00398-201ENST00000414407 STRCQ7RTU9 1775 aa24.29■■□□□ 1.48
LINC00398-201ENST00000414407 ANKLE2Q86XL3 938 aa24.29■■□□□ 1.48
LINC00398-201ENST00000414407 TMEM2Q9UHN6 1383 aa24.29■■□□□ 1.48
LINC00398-201ENST00000414407 TMEM131LA2VDJ0 1609 aa24.28■■□□□ 1.48
LINC00398-201ENST00000414407 CLTCL1P53675 1640 aa24.26■■□□□ 1.47
LINC00398-201ENST00000414407 NCKAP5LQ9HCH0 1330 aa24.26■■□□□ 1.47
LINC00398-201ENST00000414407 CHGAP10645 457 aaKnown RBP24.24■■□□□ 1.47
LINC00398-201ENST00000414407 CCDC144AA2RUR9 1427 aa24.24■■□□□ 1.47
LINC00398-201ENST00000414407 EID1Q9Y6B2 187 aa24.23■■□□□ 1.47
LINC00398-201ENST00000414407 MED14O60244 1454 aa24.22■■□□□ 1.47
LINC00398-201ENST00000414407 HDGFP51858 240 aaKnown RBP24.22■■□□□ 1.47
LINC00398-201ENST00000414407 SCAF11Q99590 1463 aaKnown RBP24.21■■□□□ 1.47
LINC00398-201ENST00000414407 ANKRD30BQ9BXX2 1392 aa24.21■■□□□ 1.47
LINC00398-201ENST00000414407 TXNDC2Q86VQ3 553 aa24.21■■□□□ 1.47
LINC00398-201ENST00000414407 POLR1AO95602 1720 aaPredicted RBP24.21■■□□□ 1.47
LINC00398-201ENST00000414407 ZFYVE9O95405 1425 aa24.19■■□□□ 1.46
LINC00398-201ENST00000414407 LTKP29376 864 aa24.19■■□□□ 1.46
LINC00398-201ENST00000414407 PCGF6Q9BYE7 350 aa24.19■■□□□ 1.46
LINC00398-201ENST00000414407 NEURL4Q96JN8 1562 aa24.19■■□□□ 1.46
LINC00398-201ENST00000414407 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms