RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 CCER1Q8TC90 406 aaPredicted RBP27.56■■■□□ 2
CIRBP-202ENST00000413636 RNF17Q9BXT8 1623 aaKnown RBP27.56■■■□□ 2
CIRBP-202ENST00000413636 DEPDC5O75140 1603 aa27.54■■■□□ 2
CIRBP-202ENST00000413636 GGT6Q6P531 493 aa27.54■■■□□ 2
CIRBP-202ENST00000413636 UNC13BO14795 1591 aa27.53■■■□□ 2
CIRBP-202ENST00000413636 MROH1Q8NDA8 1641 aa27.52■■■□□ 2
CIRBP-202ENST00000413636 MLECQ14165 292 aa27.52■■■□□ 2
CIRBP-202ENST00000413636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.52■■■□□ 2
CIRBP-202ENST00000413636 TRIM52Q96A61 297 aa27.49■■□□□ 1.99
CIRBP-202ENST00000413636 PRDM15P57071 1507 aaPredicted RBP27.49■■□□□ 1.99
CIRBP-202ENST00000413636 NUP155O75694 1391 aa27.47■■□□□ 1.99
CIRBP-202ENST00000413636 KANK1Q14678 1352 aa27.44■■□□□ 1.98
CIRBP-202ENST00000413636 ACIN1Q9UKV3 1341 aaKnown RBP27.43■■□□□ 1.98
CIRBP-202ENST00000413636 VWDEQ8N2E2 1590 aa27.43■■□□□ 1.98
CIRBP-202ENST00000413636 KDM5DQ9BY66 1539 aa27.42■■□□□ 1.98
CIRBP-202ENST00000413636 IQGAP3Q86VI3 1631 aa27.42■■□□□ 1.98
CIRBP-202ENST00000413636 CEP152O94986 1710 aa27.41■■□□□ 1.98
CIRBP-202ENST00000413636 FAM135AQ9P2D6 1515 aa27.39■■□□□ 1.98
CIRBP-202ENST00000413636 WASHC2CQ9Y4E1 1318 aa27.39■■□□□ 1.98
CIRBP-202ENST00000413636 PPP6R1Q9UPN7 881 aa27.39■■□□□ 1.98
CIRBP-202ENST00000413636 ABCC3O15438 1527 aa27.38■■□□□ 1.97
CIRBP-202ENST00000413636 PZPP20742 1482 aa27.38■■□□□ 1.97
CIRBP-202ENST00000413636 ZC3H13Q5T200 1668 aaKnown RBP27.38■■□□□ 1.97
CIRBP-202ENST00000413636 FER1L4A9Z1Z3 1794 aa27.37■■□□□ 1.97
CIRBP-202ENST00000413636 CLTCQ00610 1675 aaKnown RBP27.37■■□□□ 1.97
CIRBP-202ENST00000413636 ADAMTSL3P82987 1691 aa27.35■■□□□ 1.97
CIRBP-202ENST00000413636 ESF1Q9H501 851 aaKnown RBP27.34■■□□□ 1.97
CIRBP-202ENST00000413636 SLC4A1APQ9BWU0 796 aaKnown RBP27.34■■□□□ 1.97
CIRBP-202ENST00000413636 LMTK2Q8IWU2 1503 aa27.34■■□□□ 1.97
CIRBP-202ENST00000413636 MPHOSPH9Q99550 1183 aa27.33■■□□□ 1.97
CIRBP-202ENST00000413636 MADDQ8WXG6 1647 aa27.33■■□□□ 1.97
CIRBP-202ENST00000413636 TET3O43151 1660 aa27.32■■□□□ 1.96
CIRBP-202ENST00000413636 CAMSAP1Q5T5Y3 1602 aa27.32■■□□□ 1.96
CIRBP-202ENST00000413636 CNTLNQ9NXG0 1405 aa27.29■■□□□ 1.96
CIRBP-202ENST00000413636 EFCAB6Q5THR3 1501 aa27.28■■□□□ 1.96
CIRBP-202ENST00000413636 RIMS1Q86UR5 1692 aaKnown RBP27.28■■□□□ 1.96
CIRBP-202ENST00000413636 MROH2AA6NES4 1674 aa27.26■■□□□ 1.96
CIRBP-202ENST00000413636 E9PCH4 1651 aa27.26■■□□□ 1.95
CIRBP-202ENST00000413636 PKD2Q13563 968 aa27.26■■□□□ 1.95
CIRBP-202ENST00000413636 CLSPNQ9HAW4 1339 aa27.26■■□□□ 1.95
CIRBP-202ENST00000413636 DHX57Q6P158 1386 aaKnown RBP27.25■■□□□ 1.95
CIRBP-202ENST00000413636 ZMYM3Q14202 1370 aa27.23■■□□□ 1.95
CIRBP-202ENST00000413636 CFAP65Q6ZU64 1925 aaKnown RBP27.23■■□□□ 1.95
CIRBP-202ENST00000413636 FOXD1Q16676 465 aa27.22■■□□□ 1.95
CIRBP-202ENST00000413636 NPATQ14207 1427 aa27.22■■□□□ 1.95
CIRBP-202ENST00000413636 ARHGAP31Q2M1Z3 1444 aa27.22■■□□□ 1.95
CIRBP-202ENST00000413636 C3P01024 1663 aa27.2■■□□□ 1.94
CIRBP-202ENST00000413636 RPRD2Q5VT52 1461 aaKnown RBP27.18■■□□□ 1.94
CIRBP-202ENST00000413636 KDM4FA0A1W2PPD8 638 aa27.18■■□□□ 1.94
CIRBP-202ENST00000413636 CEBPAP49715 358 aaPredicted RBP27.16■■□□□ 1.94
CIRBP-202ENST00000413636 PLPPR3Q6T4P5 718 aa27.16■■□□□ 1.94
CIRBP-202ENST00000413636 PREX1Q8TCU6 1659 aa27.14■■□□□ 1.94
CIRBP-202ENST00000413636 FBXO31Q5XUX0 539 aaPredicted RBP27.14■■□□□ 1.94
CIRBP-202ENST00000413636 PTPRMP28827 1452 aa27.13■■□□□ 1.93
CIRBP-202ENST00000413636 SPHKAPQ2M3C7 1700 aa27.12■■□□□ 1.93
CIRBP-202ENST00000413636 ERVK-7P63135 1459 aa27.11■■□□□ 1.93
CIRBP-202ENST00000413636 SPATA31D1Q6ZQQ2 1576 aa27.09■■□□□ 1.93
CIRBP-202ENST00000413636 PTPRTO14522 1441 aa27.08■■□□□ 1.93
CIRBP-202ENST00000413636 NOS1P29475 1434 aa27.08■■□□□ 1.93
CIRBP-202ENST00000413636 PLA2R1Q13018 1463 aa27.08■■□□□ 1.93
CIRBP-202ENST00000413636 ANKRD30BQ9BXX2 1392 aa27.07■■□□□ 1.92
CIRBP-202ENST00000413636 SYNMO15061 1565 aa27.06■■□□□ 1.92
CIRBP-202ENST00000413636 TRPM2O94759 1503 aa27.05■■□□□ 1.92
CIRBP-202ENST00000413636 TNRQ92752 1358 aa27.02■■□□□ 1.92
CIRBP-202ENST00000413636 UGGT1Q9NYU2 1555 aa27.01■■□□□ 1.91
CIRBP-202ENST00000413636 CLTCL1P53675 1640 aa27■■□□□ 1.91
CIRBP-202ENST00000413636 CCDC144AA2RUR9 1427 aa26.99■■□□□ 1.91
CIRBP-202ENST00000413636 PIK3C2BO00750 1634 aa26.98■■□□□ 1.91
CIRBP-202ENST00000413636 SETD1BQ9UPS6 1966 aaKnown RBP26.95■■□□□ 1.91
CIRBP-202ENST00000413636 SIN3AQ96ST3 1273 aa26.95■■□□□ 1.91
CIRBP-202ENST00000413636 IDI1Q13907 227 aa26.94■■□□□ 1.9
CIRBP-202ENST00000413636 SLC52A1Q9NWF4 448 aa26.94■■□□□ 1.9
CIRBP-202ENST00000413636 MYO3AQ8NEV4 1616 aa26.93■■□□□ 1.9
CIRBP-202ENST00000413636 NLRP1Q9C000 1473 aa26.91■■□□□ 1.9
CIRBP-202ENST00000413636 NEUROD1Q13562 356 aa26.9■■□□□ 1.9
CIRBP-202ENST00000413636 KIF1BO60333 1816 aa26.9■■□□□ 1.9
CIRBP-202ENST00000413636 CHGAP10645 457 aaKnown RBP26.87■■□□□ 1.89
CIRBP-202ENST00000413636 MYO5BQ9ULV0 1848 aa26.85■■□□□ 1.89
CIRBP-202ENST00000413636 ADGRB3O60242 1522 aa26.84■■□□□ 1.89
CIRBP-202ENST00000413636 CEP170BQ9Y4F5 1589 aaPredicted RBP26.84■■□□□ 1.89
CIRBP-202ENST00000413636 TMEM131LA2VDJ0 1609 aa26.84■■□□□ 1.89
CIRBP-202ENST00000413636 UHRF1BP1Q6BDS2 1440 aa26.84■■□□□ 1.89
CIRBP-202ENST00000413636 A2ML1A8K2U0 1454 aa26.84■■□□□ 1.89
CIRBP-202ENST00000413636 STAG3Q9UJ98 1225 aa26.83■■□□□ 1.89
CIRBP-202ENST00000413636 ZNF142P52746 1687 aaPredicted RBP26.83■■□□□ 1.89
CIRBP-202ENST00000413636 UBR1Q8IWV7 1749 aa26.83■■□□□ 1.89
CIRBP-202ENST00000413636 SPATA31E1Q6ZUB1 1445 aa26.81■■□□□ 1.88
CIRBP-202ENST00000413636 KDM5AP29375 1690 aaKnown RBP26.8■■□□□ 1.88
CIRBP-202ENST00000413636 RGL3Q3MIN7 710 aa26.79■■□□□ 1.88
CIRBP-202ENST00000413636 NEURL4Q96JN8 1562 aa26.77■■□□□ 1.88
CIRBP-202ENST00000413636 ZNF326Q5BKZ1 582 aaKnown RBP26.76■■□□□ 1.87
CIRBP-202ENST00000413636 TIMELESSQ9UNS1 1208 aa26.75■■□□□ 1.87
CIRBP-202ENST00000413636 TONSLQ96HA7 1378 aa26.73■■□□□ 1.87
CIRBP-202ENST00000413636 THEMISQ8N1K5 641 aaPredicted RBP26.72■■□□□ 1.87
CIRBP-202ENST00000413636 LMTK3Q96Q04 1460 aa26.7■■□□□ 1.87
CIRBP-202ENST00000413636 L3MBTL2Q969R5 705 aa26.69■■□□□ 1.86
CIRBP-202ENST00000413636 IFT172Q9UG01 1749 aa26.68■■□□□ 1.86
CIRBP-202ENST00000413636 PPLO60437 1756 aa26.68■■□□□ 1.86
CIRBP-202ENST00000413636 TMEM2Q9UHN6 1383 aa26.68■■□□□ 1.86
CIRBP-202ENST00000413636 NEXMIFQ5QGS0 1516 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms