RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 CHIC2Q9UKJ5 165 aa17.47■□□□□ 0.39
HDAC9-206ENST00000413380 YEATS2Q9ULM3 1422 aa17.47■□□□□ 0.39
HDAC9-206ENST00000413380 SETD5Q9C0A6 1442 aa17.46■□□□□ 0.39
HDAC9-206ENST00000413380 DEPDC5O75140 1603 aa17.44■□□□□ 0.38
HDAC9-206ENST00000413380 HRCP23327 699 aa17.44■□□□□ 0.38
HDAC9-206ENST00000413380 ANKRD50Q9ULJ7 1429 aa17.44■□□□□ 0.38
HDAC9-206ENST00000413380 ATP10AO60312 1499 aa17.44■□□□□ 0.38
HDAC9-206ENST00000413380 A2MP01023 1474 aa17.44■□□□□ 0.38
HDAC9-206ENST00000413380 DHX29Q7Z478 1369 aaKnown RBP17.43■□□□□ 0.38
HDAC9-206ENST00000413380 AGLP35573 1532 aa17.42■□□□□ 0.38
HDAC9-206ENST00000413380 RRP7BPQ9NSQ0 103 aa17.42■□□□□ 0.38
HDAC9-206ENST00000413380 RNF17Q9BXT8 1623 aaKnown RBP17.42■□□□□ 0.38
HDAC9-206ENST00000413380 UNC13BO14795 1591 aa17.41■□□□□ 0.38
HDAC9-206ENST00000413380 SIGLEC1Q9BZZ2 1709 aa17.41■□□□□ 0.38
HDAC9-206ENST00000413380 RAB3GAP2Q9H2M9 1393 aa17.4■□□□□ 0.38
HDAC9-206ENST00000413380 ACIN1Q9UKV3 1341 aaKnown RBP17.4■□□□□ 0.38
HDAC9-206ENST00000413380 KDM5DQ9BY66 1539 aa17.38■□□□□ 0.37
HDAC9-206ENST00000413380 MROH1Q8NDA8 1641 aa17.37■□□□□ 0.37
HDAC9-206ENST00000413380 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
HDAC9-206ENST00000413380 PRDM15P57071 1507 aaPredicted RBP17.37■□□□□ 0.37
HDAC9-206ENST00000413380 VWDEQ8N2E2 1590 aa17.36■□□□□ 0.37
HDAC9-206ENST00000413380 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
HDAC9-206ENST00000413380 IQGAP3Q86VI3 1631 aa17.34■□□□□ 0.37
HDAC9-206ENST00000413380 RNF216Q9NWF9 866 aaPredicted RBP17.34■□□□□ 0.37
HDAC9-206ENST00000413380 FAM135AQ9P2D6 1515 aa17.34■□□□□ 0.37
HDAC9-206ENST00000413380 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
HDAC9-206ENST00000413380 ZC3H13Q5T200 1668 aaKnown RBP17.3■□□□□ 0.36
HDAC9-206ENST00000413380 HOXD11P31277 338 aaPredicted RBP17.29■□□□□ 0.36
HDAC9-206ENST00000413380 LMTK2Q8IWU2 1503 aa17.28■□□□□ 0.36
HDAC9-206ENST00000413380 PZPP20742 1482 aa17.28■□□□□ 0.36
HDAC9-206ENST00000413380 TET3O43151 1660 aa17.26■□□□□ 0.35
HDAC9-206ENST00000413380 KIF3BO15066 747 aa17.26■□□□□ 0.35
HDAC9-206ENST00000413380 CEP152O94986 1710 aa17.25■□□□□ 0.35
HDAC9-206ENST00000413380 ABCC3O15438 1527 aa17.24■□□□□ 0.35
HDAC9-206ENST00000413380 NUP155O75694 1391 aa17.22■□□□□ 0.35
HDAC9-206ENST00000413380 EFCAB6Q5THR3 1501 aa17.21■□□□□ 0.35
HDAC9-206ENST00000413380 MROH2AA6NES4 1674 aa17.21■□□□□ 0.35
HDAC9-206ENST00000413380 KANK1Q14678 1352 aa17.21■□□□□ 0.35
HDAC9-206ENST00000413380 DHX57Q6P158 1386 aaKnown RBP17.21■□□□□ 0.35
HDAC9-206ENST00000413380 CAMSAP1Q5T5Y3 1602 aa17.21■□□□□ 0.35
HDAC9-206ENST00000413380 E9PCH4 1651 aa17.2■□□□□ 0.34
HDAC9-206ENST00000413380 ADAMTSL3P82987 1691 aa17.2■□□□□ 0.34
HDAC9-206ENST00000413380 FER1L4A9Z1Z3 1794 aa17.19■□□□□ 0.34
HDAC9-206ENST00000413380 CLTCQ00610 1675 aaKnown RBP17.18■□□□□ 0.34
HDAC9-206ENST00000413380 RPRD2Q5VT52 1461 aaKnown RBP17.18■□□□□ 0.34
HDAC9-206ENST00000413380 ARHGAP31Q2M1Z3 1444 aa17.17■□□□□ 0.34
HDAC9-206ENST00000413380 CNTLNQ9NXG0 1405 aa17.16■□□□□ 0.34
HDAC9-206ENST00000413380 TRIM52Q96A61 297 aa17.16■□□□□ 0.34
HDAC9-206ENST00000413380 MPHOSPH9Q99550 1183 aa17.16■□□□□ 0.34
HDAC9-206ENST00000413380 GGT6Q6P531 493 aa17.15■□□□□ 0.34
HDAC9-206ENST00000413380 SPHKAPQ2M3C7 1700 aa17.13■□□□□ 0.33
HDAC9-206ENST00000413380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
HDAC9-206ENST00000413380 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
HDAC9-206ENST00000413380 CLSPNQ9HAW4 1339 aa17.13■□□□□ 0.33
HDAC9-206ENST00000413380 MADDQ8WXG6 1647 aa17.13■□□□□ 0.33
HDAC9-206ENST00000413380 ARID4BQ4LE39 1312 aaPredicted RBP17.12■□□□□ 0.33
HDAC9-206ENST00000413380 WASHC2CQ9Y4E1 1318 aa17.12■□□□□ 0.33
HDAC9-206ENST00000413380 NPATQ14207 1427 aa17.12■□□□□ 0.33
HDAC9-206ENST00000413380 PREX1Q8TCU6 1659 aa17.1■□□□□ 0.33
HDAC9-206ENST00000413380 PTPRTO14522 1441 aa17.1■□□□□ 0.33
HDAC9-206ENST00000413380 PKD2Q13563 968 aa17.09■□□□□ 0.33
HDAC9-206ENST00000413380 TRPM2O94759 1503 aa17.09■□□□□ 0.33
HDAC9-206ENST00000413380 C3P01024 1663 aa17.09■□□□□ 0.33
HDAC9-206ENST00000413380 ANKRD30BQ9BXX2 1392 aa17.08■□□□□ 0.32
HDAC9-206ENST00000413380 CFAP65Q6ZU64 1925 aaKnown RBP17.08■□□□□ 0.32
HDAC9-206ENST00000413380 RIMS1Q86UR5 1692 aaKnown RBP17.07■□□□□ 0.32
HDAC9-206ENST00000413380 SPATA31D1Q6ZQQ2 1576 aa17.07■□□□□ 0.32
HDAC9-206ENST00000413380 PLA2R1Q13018 1463 aa17.07■□□□□ 0.32
HDAC9-206ENST00000413380 NOS1P29475 1434 aa17.07■□□□□ 0.32
HDAC9-206ENST00000413380 MLECQ14165 292 aa17.06■□□□□ 0.32
HDAC9-206ENST00000413380 PIK3C2BO00750 1634 aa17.06■□□□□ 0.32
HDAC9-206ENST00000413380 ERVK-7P63135 1459 aa17.05■□□□□ 0.32
HDAC9-206ENST00000413380 ZMYM3Q14202 1370 aa17.04■□□□□ 0.32
HDAC9-206ENST00000413380 SYNMO15061 1565 aa17.04■□□□□ 0.32
HDAC9-206ENST00000413380 NEURL4Q96JN8 1562 aa17.02■□□□□ 0.32
HDAC9-206ENST00000413380 CLTCL1P53675 1640 aa17.02■□□□□ 0.31
HDAC9-206ENST00000413380 CCER1Q8TC90 406 aaPredicted RBP17.01■□□□□ 0.31
HDAC9-206ENST00000413380 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
HDAC9-206ENST00000413380 SETD1BQ9UPS6 1966 aaKnown RBP17■□□□□ 0.31
HDAC9-206ENST00000413380 KIF1BO60333 1816 aa16.98■□□□□ 0.31
HDAC9-206ENST00000413380 KDM5AP29375 1690 aaKnown RBP16.98■□□□□ 0.31
HDAC9-206ENST00000413380 PTPRMP28827 1452 aa16.97■□□□□ 0.31
HDAC9-206ENST00000413380 CCDC144AA2RUR9 1427 aa16.96■□□□□ 0.31
HDAC9-206ENST00000413380 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
HDAC9-206ENST00000413380 ADGRB3O60242 1522 aa16.93■□□□□ 0.3
HDAC9-206ENST00000413380 FBXO31Q5XUX0 539 aaPredicted RBP16.93■□□□□ 0.3
HDAC9-206ENST00000413380 ZNF142P52746 1687 aaPredicted RBP16.93■□□□□ 0.3
HDAC9-206ENST00000413380 NLRP1Q9C000 1473 aa16.93■□□□□ 0.3
HDAC9-206ENST00000413380 MYO3AQ8NEV4 1616 aa16.92■□□□□ 0.3
HDAC9-206ENST00000413380 SLC52A1Q9NWF4 448 aa16.92■□□□□ 0.3
HDAC9-206ENST00000413380 SPATA31E1Q6ZUB1 1445 aa16.92■□□□□ 0.3
HDAC9-206ENST00000413380 TMEM131LA2VDJ0 1609 aa16.92■□□□□ 0.3
HDAC9-206ENST00000413380 MYO5BQ9ULV0 1848 aa16.91■□□□□ 0.3
HDAC9-206ENST00000413380 TNRQ92752 1358 aa16.91■□□□□ 0.3
HDAC9-206ENST00000413380 KDM4FA0A1W2PPD8 638 aa16.91■□□□□ 0.3
HDAC9-206ENST00000413380 UBR1Q8IWV7 1749 aa16.9■□□□□ 0.3
HDAC9-206ENST00000413380 IFT172Q9UG01 1749 aa16.9■□□□□ 0.3
HDAC9-206ENST00000413380 SIN3AQ96ST3 1273 aa16.89■□□□□ 0.29
HDAC9-206ENST00000413380 TIMELESSQ9UNS1 1208 aa16.89■□□□□ 0.29
HDAC9-206ENST00000413380 CEBPAP49715 358 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms