RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 SRCAPQ6ZRS2 3230 aa15.46■□□□□ 0.07
SOX9-AS1-201ENST00000412640 IQGAP1P46940 1657 aa15.45■□□□□ 0.06
SOX9-AS1-201ENST00000412640 ATP7AQ04656 1500 aa15.45■□□□□ 0.06
SOX9-AS1-201ENST00000412640 DEPDC5O75140 1603 aa15.45■□□□□ 0.06
SOX9-AS1-201ENST00000412640 SYNMO15061 1565 aa15.45■□□□□ 0.06
SOX9-AS1-201ENST00000412640 FMN1Q68DA7 1419 aa15.44■□□□□ 0.06
SOX9-AS1-201ENST00000412640 SYCP2Q9BX26 1530 aa15.44■□□□□ 0.06
SOX9-AS1-201ENST00000412640 FAM135BQ49AJ0 1406 aa15.43■□□□□ 0.06
SOX9-AS1-201ENST00000412640 UGGT1Q9NYU2 1555 aa15.42■□□□□ 0.06
SOX9-AS1-201ENST00000412640 FAM135AQ9P2D6 1515 aa15.42■□□□□ 0.06
SOX9-AS1-201ENST00000412640 CDC42BPAQ5VT25 1732 aa15.41■□□□□ 0.06
SOX9-AS1-201ENST00000412640 LRRIQ1Q96JM4 1722 aa15.41■□□□□ 0.06
SOX9-AS1-201ENST00000412640 MIA2Q96PC5 1412 aa15.39■□□□□ 0.05
SOX9-AS1-201ENST00000412640 INO80Q9ULG1 1556 aaPredicted RBP15.39■□□□□ 0.05
SOX9-AS1-201ENST00000412640 PZPP20742 1482 aa15.38■□□□□ 0.05
SOX9-AS1-201ENST00000412640 XIRP1Q702N8 1843 aaKnown RBP15.38■□□□□ 0.05
SOX9-AS1-201ENST00000412640 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
SOX9-AS1-201ENST00000412640 NLRP1Q9C000 1473 aa15.36■□□□□ 0.05
SOX9-AS1-201ENST00000412640 ROBO1Q9Y6N7 1651 aa15.35■□□□□ 0.05
SOX9-AS1-201ENST00000412640 ARHGAP35Q9NRY4 1499 aa15.34■□□□□ 0.05
SOX9-AS1-201ENST00000412640 KIF3BO15066 747 aa15.34■□□□□ 0.05
SOX9-AS1-201ENST00000412640 WASHC2CQ9Y4E1 1318 aa15.34■□□□□ 0.05
SOX9-AS1-201ENST00000412640 ZC3H13Q5T200 1668 aaKnown RBP15.33■□□□□ 0.04
SOX9-AS1-201ENST00000412640 ADGBQ8N7X0 1667 aa15.33■□□□□ 0.04
SOX9-AS1-201ENST00000412640 GPATCH8Q9UKJ3 1502 aaKnown RBP15.32■□□□□ 0.04
SOX9-AS1-201ENST00000412640 MEX3CQ5U5Q3 659 aaKnown RBP15.31■□□□□ 0.04
SOX9-AS1-201ENST00000412640 ZNF772Q68DY9 489 aaPredicted RBP15.31■□□□□ 0.04
SOX9-AS1-201ENST00000412640 RBM33Q96EV2 1170 aaKnown RBP15.31■□□□□ 0.04
SOX9-AS1-201ENST00000412640 JCADQ9P266 1359 aa15.31■□□□□ 0.04
SOX9-AS1-201ENST00000412640 KIAA1107Q9UPP5 1409 aa15.31■□□□□ 0.04
SOX9-AS1-201ENST00000412640 RXRBP28702 533 aa15.3■□□□□ 0.04
SOX9-AS1-201ENST00000412640 KDM5DQ9BY66 1539 aa15.3■□□□□ 0.04
SOX9-AS1-201ENST00000412640 CFDP1Q9UEE9 299 aaPredicted RBP15.3■□□□□ 0.04
SOX9-AS1-201ENST00000412640 TMEM94Q12767 1356 aa15.29■□□□□ 0.04
SOX9-AS1-201ENST00000412640 DHX29Q7Z478 1369 aaKnown RBP15.29■□□□□ 0.04
SOX9-AS1-201ENST00000412640 LTKP29376 864 aa15.29■□□□□ 0.04
SOX9-AS1-201ENST00000412640 EEA1Q15075 1411 aa15.28■□□□□ 0.04
SOX9-AS1-201ENST00000412640 UBTFP17480 764 aaKnown RBP15.28■□□□□ 0.04
SOX9-AS1-201ENST00000412640 LRP6O75581 1613 aa15.28■□□□□ 0.04
SOX9-AS1-201ENST00000412640 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.04
SOX9-AS1-201ENST00000412640 PHLPP1O60346 1717 aa15.27■□□□□ 0.04
SOX9-AS1-201ENST00000412640 TXNDC2Q86VQ3 553 aa15.27■□□□□ 0.04
SOX9-AS1-201ENST00000412640 SCAF11Q99590 1463 aaKnown RBP15.27■□□□□ 0.03
SOX9-AS1-201ENST00000412640 ZNF644Q9H582 1327 aaPredicted RBP15.25■□□□□ 0.03
SOX9-AS1-201ENST00000412640 PROSER2Q86WR7 435 aaPredicted RBP15.24■□□□□ 0.03
SOX9-AS1-201ENST00000412640 CCDC18Q5T9S5 1454 aa15.24■□□□□ 0.03
SOX9-AS1-201ENST00000412640 SLAIN2Q9P270 581 aa15.22■□□□□ 0.03
SOX9-AS1-201ENST00000412640 LRRC9Q6ZRR7 1453 aa15.21■□□□□ 0.03
SOX9-AS1-201ENST00000412640 SPATA31A6Q5VVP1 1343 aa15.21■□□□□ 0.03
SOX9-AS1-201ENST00000412640 MAP3K1Q13233 1512 aa15.21■□□□□ 0.03
SOX9-AS1-201ENST00000412640 CDK12Q9NYV4 1490 aaPredicted RBP15.2■□□□□ 0.02
SOX9-AS1-201ENST00000412640 LOC105371045A0A1W2PR82 267 aa15.2■□□□□ 0.02
SOX9-AS1-201ENST00000412640 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
SOX9-AS1-201ENST00000412640 CCNB3Q8WWL7 1395 aa15.2■□□□□ 0.02
SOX9-AS1-201ENST00000412640 RTEL1-TNFRSF6BF6WH68 1400 aa15.19■□□□□ 0.02
SOX9-AS1-201ENST00000412640 CASKIN1Q8WXD9 1431 aa15.19■□□□□ 0.02
SOX9-AS1-201ENST00000412640 UBR1Q8IWV7 1749 aa15.19■□□□□ 0.02
SOX9-AS1-201ENST00000412640 NCOA2Q15596 1464 aa15.19■□□□□ 0.02
SOX9-AS1-201ENST00000412640 COL16A1Q07092 1604 aaPredicted RBP15.18■□□□□ 0.02
SOX9-AS1-201ENST00000412640 NUTM2BA6NNL0 878 aaPredicted RBP15.18■□□□□ 0.02
SOX9-AS1-201ENST00000412640 NUTM2EB1AL46 878 aaPredicted RBP15.18■□□□□ 0.02
SOX9-AS1-201ENST00000412640 KCNA6P17658 529 aa15.18■□□□□ 0.02
SOX9-AS1-201ENST00000412640 NUTM2DQ5VT03 806 aaPredicted RBP15.18■□□□□ 0.02
SOX9-AS1-201ENST00000412640 NUTM2AQ8IVF1 878 aaPredicted RBP15.18■□□□□ 0.02
SOX9-AS1-201ENST00000412640 EID1Q9Y6B2 187 aa15.18■□□□□ 0.02
SOX9-AS1-201ENST00000412640 MBD5Q9P267 1494 aa15.18■□□□□ 0.02
SOX9-AS1-201ENST00000412640 SETBP1Q9Y6X0 1596 aa15.18■□□□□ 0.02
SOX9-AS1-201ENST00000412640 ERVK-7P63135 1459 aa15.17■□□□□ 0.02
SOX9-AS1-201ENST00000412640 ARHGAP23Q9P227 1491 aa15.17■□□□□ 0.02
SOX9-AS1-201ENST00000412640 MSH6P52701 1360 aa15.16■□□□□ 0.02
SOX9-AS1-201ENST00000412640 SLC26A8Q96RN1 970 aa15.16■□□□□ 0.02
SOX9-AS1-201ENST00000412640 SLIT1O75093 1534 aa15.15■□□□□ 0.02
SOX9-AS1-201ENST00000412640 RGS12O14924 1447 aa15.15■□□□□ 0.02
SOX9-AS1-201ENST00000412640 AFF2P51816 1311 aa15.15■□□□□ 0.02
SOX9-AS1-201ENST00000412640 FGD6Q6ZV73 1430 aa15.14■□□□□ 0.01
SOX9-AS1-201ENST00000412640 PRDM15P57071 1507 aaPredicted RBP15.12■□□□□ 0.01
SOX9-AS1-201ENST00000412640 CFAP65Q6ZU64 1925 aaKnown RBP15.12■□□□□ 0.01
SOX9-AS1-201ENST00000412640 ABCC3O15438 1527 aa15.12■□□□□ 0.01
SOX9-AS1-201ENST00000412640 QTRT2Q9H974 415 aaKnown RBP15.11■□□□□ 0.01
SOX9-AS1-201ENST00000412640 TIAM1Q13009 1591 aa15.11■□□□□ 0.01
SOX9-AS1-201ENST00000412640 FOXD1Q16676 465 aa15.1■□□□□ 0.01
SOX9-AS1-201ENST00000412640 RBM6P78332 1123 aaKnown RBP15.09■□□□□ 0.01
SOX9-AS1-201ENST00000412640 SHPRHQ149N8 1683 aa15.09■□□□□ 0.01
SOX9-AS1-201ENST00000412640 TMEM2Q9UHN6 1383 aa15.09■□□□□ 0.01
SOX9-AS1-201ENST00000412640 STAG3Q9UJ98 1225 aa15.06■□□□□ 0
SOX9-AS1-201ENST00000412640 ATAD2Q6PL18 1390 aa15.06■□□□□ 0
SOX9-AS1-201ENST00000412640 NKTRP30414 1462 aaKnown RBP15.06■□□□□ 0
SOX9-AS1-201ENST00000412640 FYCO1Q9BQS8 1478 aa15.06■□□□□ 0
SOX9-AS1-201ENST00000412640 C8orf37Q96NL8 207 aa15.05■□□□□ -0
SOX9-AS1-201ENST00000412640 CCDC141Q6ZP82 1450 aa15.05■□□□□ -0
SOX9-AS1-201ENST00000412640 TET3O43151 1660 aa15.04■□□□□ -0
SOX9-AS1-201ENST00000412640 MTUS2Q5JR59 1369 aa15.04■□□□□ -0
SOX9-AS1-201ENST00000412640 BCANQ96GW7 911 aa15.04■□□□□ -0
SOX9-AS1-201ENST00000412640 KDM5AP29375 1690 aaKnown RBP15.03■□□□□ -0
SOX9-AS1-201ENST00000412640 PIK3C2BO00750 1634 aa15.03■□□□□ -0
SOX9-AS1-201ENST00000412640 AHDC1Q5TGY3 1603 aaPredicted RBP15.03■□□□□ -0
SOX9-AS1-201ENST00000412640 NWD1Q149M9 1564 aa15.02■□□□□ -0
SOX9-AS1-201ENST00000412640 C14orf37Q86TY3 774 aa15.02■□□□□ -0
SOX9-AS1-201ENST00000412640 CEP152O94986 1710 aa15.02□□□□□ -0.01
SOX9-AS1-201ENST00000412640 DIP2AQ14689 1571 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms