RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 LRRC7Q96NW7 1537 aa11.4□□□□□ -0.58
LSM8-202ENST00000411938 LRRIQ1Q96JM4 1722 aa11.4□□□□□ -0.58
LSM8-202ENST00000411938 CFDP1Q9UEE9 299 aaPredicted RBP11.39□□□□□ -0.59
LSM8-202ENST00000411938 KIAA1107Q9UPP5 1409 aa11.38□□□□□ -0.59
LSM8-202ENST00000411938 FAM135AQ9P2D6 1515 aa11.38□□□□□ -0.59
LSM8-202ENST00000411938 RNF17Q9BXT8 1623 aaKnown RBP11.38□□□□□ -0.59
LSM8-202ENST00000411938 MED14O60244 1454 aa11.38□□□□□ -0.59
LSM8-202ENST00000411938 CCDC18Q5T9S5 1454 aa11.38□□□□□ -0.59
LSM8-202ENST00000411938 PLEKHH2Q8IVE3 1493 aa11.38□□□□□ -0.59
LSM8-202ENST00000411938 INO80Q9ULG1 1556 aaPredicted RBP11.37□□□□□ -0.59
LSM8-202ENST00000411938 GPATCH8Q9UKJ3 1502 aaKnown RBP11.37□□□□□ -0.59
LSM8-202ENST00000411938 WASHC2CQ9Y4E1 1318 aa11.36□□□□□ -0.59
LSM8-202ENST00000411938 MIA2Q96PC5 1412 aa11.36□□□□□ -0.59
LSM8-202ENST00000411938 KIF3BO15066 747 aa11.36□□□□□ -0.59
LSM8-202ENST00000411938 PZPP20742 1482 aa11.36□□□□□ -0.59
LSM8-202ENST00000411938 UGGT1Q9NYU2 1555 aa11.36□□□□□ -0.59
LSM8-202ENST00000411938 DEPDC5O75140 1603 aa11.35□□□□□ -0.59
LSM8-202ENST00000411938 NLRP1Q9C000 1473 aa11.35□□□□□ -0.59
LSM8-202ENST00000411938 CASKIN1Q8WXD9 1431 aa11.35□□□□□ -0.59
LSM8-202ENST00000411938 STRCP1A6NGW2 1772 aa11.34□□□□□ -0.59
LSM8-202ENST00000411938 IQGAP1P46940 1657 aa11.34□□□□□ -0.59
LSM8-202ENST00000411938 ADGBQ8N7X0 1667 aa11.34□□□□□ -0.59
LSM8-202ENST00000411938 SYNMO15061 1565 aa11.33□□□□□ -0.6
LSM8-202ENST00000411938 DHX29Q7Z478 1369 aaKnown RBP11.33□□□□□ -0.6
LSM8-202ENST00000411938 CCNB3Q8WWL7 1395 aa11.33□□□□□ -0.6
LSM8-202ENST00000411938 CHIC1Q5VXU3 224 aa11.32□□□□□ -0.6
LSM8-202ENST00000411938 ZNF644Q9H582 1327 aaPredicted RBP11.32□□□□□ -0.6
LSM8-202ENST00000411938 SETD1AO15047 1707 aaKnown RBP11.32□□□□□ -0.6
LSM8-202ENST00000411938 KDM5DQ9BY66 1539 aa11.31□□□□□ -0.6
LSM8-202ENST00000411938 FAM135BQ49AJ0 1406 aa11.31□□□□□ -0.6
LSM8-202ENST00000411938 UPF1Q92900 1129 aaKnown RBP eCLIP11.3□□□□□ -0.6
LSM8-202ENST00000411938 RTEL1-TNFRSF6BF6WH68 1400 aa11.28□□□□□ -0.6
LSM8-202ENST00000411938 TXNDC2Q86VQ3 553 aa11.27□□□□□ -0.61
LSM8-202ENST00000411938 TRIM52Q96A61 297 aa11.27□□□□□ -0.61
LSM8-202ENST00000411938 MBD5Q9P267 1494 aa11.26□□□□□ -0.61
LSM8-202ENST00000411938 SCAF11Q99590 1463 aaKnown RBP11.25□□□□□ -0.61
LSM8-202ENST00000411938 FYCO1Q9BQS8 1478 aa11.25□□□□□ -0.61
LSM8-202ENST00000411938 LTKP29376 864 aa11.25□□□□□ -0.61
LSM8-202ENST00000411938 TMEM94Q12767 1356 aa11.25□□□□□ -0.61
LSM8-202ENST00000411938 MTUS2Q5JR59 1369 aa11.25□□□□□ -0.61
LSM8-202ENST00000411938 ZC3H13Q5T200 1668 aaKnown RBP11.24□□□□□ -0.61
LSM8-202ENST00000411938 EID1Q9Y6B2 187 aa11.24□□□□□ -0.61
LSM8-202ENST00000411938 MEX3CQ5U5Q3 659 aaKnown RBP11.23□□□□□ -0.61
LSM8-202ENST00000411938 PROSER2Q86WR7 435 aaPredicted RBP11.23□□□□□ -0.61
LSM8-202ENST00000411938 RBM33Q96EV2 1170 aaKnown RBP11.23□□□□□ -0.61
LSM8-202ENST00000411938 JCADQ9P266 1359 aa11.23□□□□□ -0.61
LSM8-202ENST00000411938 XIRP1Q702N8 1843 aaKnown RBP11.23□□□□□ -0.61
LSM8-202ENST00000411938 ZNF772Q68DY9 489 aaPredicted RBP11.22□□□□□ -0.61
LSM8-202ENST00000411938 ROBO1Q9Y6N7 1651 aa11.22□□□□□ -0.61
LSM8-202ENST00000411938 ERVK-7P63135 1459 aa11.21□□□□□ -0.61
LSM8-202ENST00000411938 KCNA6P17658 529 aa11.2□□□□□ -0.62
LSM8-202ENST00000411938 SLAIN2Q9P270 581 aa11.2□□□□□ -0.62
LSM8-202ENST00000411938 CCDC141Q6ZP82 1450 aa11.19□□□□□ -0.62
LSM8-202ENST00000411938 LRRC9Q6ZRR7 1453 aa11.19□□□□□ -0.62
LSM8-202ENST00000411938 RXRBP28702 533 aa11.19□□□□□ -0.62
LSM8-202ENST00000411938 RSPH4AQ5TD94 716 aa11.19□□□□□ -0.62
LSM8-202ENST00000411938 ABCC3O15438 1527 aa11.19□□□□□ -0.62
LSM8-202ENST00000411938 NCOA2Q15596 1464 aa11.19□□□□□ -0.62
LSM8-202ENST00000411938 CFAP65Q6ZU64 1925 aaKnown RBP11.18□□□□□ -0.62
LSM8-202ENST00000411938 TSPY4P0CV99 314 aa11.18□□□□□ -0.62
LSM8-202ENST00000411938 TSPY10P0CW01 314 aa11.18□□□□□ -0.62
LSM8-202ENST00000411938 STAG3Q9UJ98 1225 aa11.18□□□□□ -0.62
LSM8-202ENST00000411938 TIAM1Q13009 1591 aa11.18□□□□□ -0.62
LSM8-202ENST00000411938 ARHGAP23Q9P227 1491 aa11.18□□□□□ -0.62
LSM8-202ENST00000411938 UBR1Q8IWV7 1749 aa11.18□□□□□ -0.62
LSM8-202ENST00000411938 MSH6P52701 1360 aa11.17□□□□□ -0.62
LSM8-202ENST00000411938 SRCAPQ6ZRS2 3230 aa11.17□□□□□ -0.62
LSM8-202ENST00000411938 SLC26A8Q96RN1 970 aa11.17□□□□□ -0.62
LSM8-202ENST00000411938 SLIT1O75093 1534 aa11.17□□□□□ -0.62
LSM8-202ENST00000411938 PHLPP1O60346 1717 aa11.17□□□□□ -0.62
LSM8-202ENST00000411938 SPATA31A6Q5VVP1 1343 aa11.16□□□□□ -0.62
LSM8-202ENST00000411938 MAP3K1Q13233 1512 aa11.15□□□□□ -0.62
LSM8-202ENST00000411938 LRP6O75581 1613 aa11.15□□□□□ -0.62
LSM8-202ENST00000411938 TMEM2Q9UHN6 1383 aa11.15□□□□□ -0.63
LSM8-202ENST00000411938 BCANQ96GW7 911 aa11.14□□□□□ -0.63
LSM8-202ENST00000411938 CAMSAP2Q08AD1 1489 aa11.13□□□□□ -0.63
LSM8-202ENST00000411938 NUTM2BA6NNL0 878 aaPredicted RBP11.13□□□□□ -0.63
LSM8-202ENST00000411938 NUTM2EB1AL46 878 aaPredicted RBP11.13□□□□□ -0.63
LSM8-202ENST00000411938 NUTM2AQ8IVF1 878 aaPredicted RBP11.13□□□□□ -0.63
LSM8-202ENST00000411938 PRDM15P57071 1507 aaPredicted RBP11.13□□□□□ -0.63
LSM8-202ENST00000411938 CEP162Q5TB80 1403 aa11.12□□□□□ -0.63
LSM8-202ENST00000411938 FGD6Q6ZV73 1430 aa11.12□□□□□ -0.63
LSM8-202ENST00000411938 EHBP1L1Q8N3D4 1523 aa11.11□□□□□ -0.63
LSM8-202ENST00000411938 C14orf37Q86TY3 774 aa11.11□□□□□ -0.63
LSM8-202ENST00000411938 NKTRP30414 1462 aaKnown RBP11.11□□□□□ -0.63
LSM8-202ENST00000411938 CDK12Q9NYV4 1490 aaPredicted RBP11.11□□□□□ -0.63
LSM8-202ENST00000411938 COL16A1Q07092 1604 aaPredicted RBP11.1□□□□□ -0.63
LSM8-202ENST00000411938 NUTM2DQ5VT03 806 aaPredicted RBP11.1□□□□□ -0.63
LSM8-202ENST00000411938 AFF2P51816 1311 aa11.09□□□□□ -0.63
LSM8-202ENST00000411938 CEP152O94986 1710 aa11.09□□□□□ -0.63
LSM8-202ENST00000411938 IDI1Q13907 227 aa11.08□□□□□ -0.64
LSM8-202ENST00000411938 FOXD1Q16676 465 aa11.08□□□□□ -0.64
LSM8-202ENST00000411938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.08□□□□□ -0.64
LSM8-202ENST00000411938 ZRANB1Q9UGI0 708 aa11.08□□□□□ -0.64
LSM8-202ENST00000411938 PIK3C2BO00750 1634 aa11.08□□□□□ -0.64
LSM8-202ENST00000411938 ARHGEF5Q12774 1597 aa11.07□□□□□ -0.64
LSM8-202ENST00000411938 MROH1Q8NDA8 1641 aa11.07□□□□□ -0.64
LSM8-202ENST00000411938 EFCAB6Q5THR3 1501 aa11.07□□□□□ -0.64
LSM8-202ENST00000411938 ARHGAP31Q2M1Z3 1444 aa11.07□□□□□ -0.64
LSM8-202ENST00000411938 TET3O43151 1660 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms