RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 ADGRL2O95490 1459 aa25.05■■□□□ 1.6
NOD1-202ENST00000411552 ILDR1Q86SU0 546 aaPredicted RBP25.05■■□□□ 1.6
NOD1-202ENST00000411552 RNF17Q9BXT8 1623 aaKnown RBP25.04■■□□□ 1.6
NOD1-202ENST00000411552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.03■■□□□ 1.6
NOD1-202ENST00000411552 PTPRKQ15262 1439 aa25.03■■□□□ 1.6
NOD1-202ENST00000411552 ZMYM3Q14202 1370 aa25.02■■□□□ 1.6
NOD1-202ENST00000411552 ERBINQ96RT1 1412 aa25.02■■□□□ 1.6
NOD1-202ENST00000411552 RRBP1Q9P2E9 1410 aaKnown RBP25.01■■□□□ 1.59
NOD1-202ENST00000411552 LMTK3Q96Q04 1460 aa25.01■■□□□ 1.59
NOD1-202ENST00000411552 KDM5DQ9BY66 1539 aa25■■□□□ 1.59
NOD1-202ENST00000411552 FAM135AQ9P2D6 1515 aa25■■□□□ 1.59
NOD1-202ENST00000411552 SETD1BQ9UPS6 1966 aaKnown RBP24.99■■□□□ 1.59
NOD1-202ENST00000411552 MROH1Q8NDA8 1641 aa24.98■■□□□ 1.59
NOD1-202ENST00000411552 PREX1Q8TCU6 1659 aa24.97■■□□□ 1.59
NOD1-202ENST00000411552 WASHC2CQ9Y4E1 1318 aa24.96■■□□□ 1.59
NOD1-202ENST00000411552 ITGAEP38570 1179 aa24.96■■□□□ 1.59
NOD1-202ENST00000411552 NPATQ14207 1427 aa24.94■■□□□ 1.58
NOD1-202ENST00000411552 ROCK1Q13464 1354 aa24.93■■□□□ 1.58
NOD1-202ENST00000411552 ABCC3O15438 1527 aa24.92■■□□□ 1.58
NOD1-202ENST00000411552 DEPDC5O75140 1603 aa24.92■■□□□ 1.58
NOD1-202ENST00000411552 PRDM15P57071 1507 aaPredicted RBP24.91■■□□□ 1.58
NOD1-202ENST00000411552 ZC3H13Q5T200 1668 aaKnown RBP24.91■■□□□ 1.58
NOD1-202ENST00000411552 UHRF1BP1Q6BDS2 1440 aa24.9■■□□□ 1.58
NOD1-202ENST00000411552 CEP152O94986 1710 aa24.89■■□□□ 1.58
NOD1-202ENST00000411552 ANKRD50Q9ULJ7 1429 aa24.89■■□□□ 1.58
NOD1-202ENST00000411552 HSPA2P54652 639 aa24.88■■□□□ 1.57
NOD1-202ENST00000411552 PZPP20742 1482 aa24.88■■□□□ 1.57
NOD1-202ENST00000411552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.86■■□□□ 1.57
NOD1-202ENST00000411552 CAMSAP1Q5T5Y3 1602 aa24.84■■□□□ 1.57
NOD1-202ENST00000411552 FBXO31Q5XUX0 539 aaPredicted RBP24.84■■□□□ 1.57
NOD1-202ENST00000411552 MYO3AQ8NEV4 1616 aa24.83■■□□□ 1.56
NOD1-202ENST00000411552 KANK1Q14678 1352 aa24.82■■□□□ 1.56
NOD1-202ENST00000411552 VWDEQ8N2E2 1590 aa24.81■■□□□ 1.56
NOD1-202ENST00000411552 TNRQ92752 1358 aa24.79■■□□□ 1.56
NOD1-202ENST00000411552 ZNF142P52746 1687 aaPredicted RBP24.78■■□□□ 1.56
NOD1-202ENST00000411552 LMTK2Q8IWU2 1503 aa24.77■■□□□ 1.56
NOD1-202ENST00000411552 CFAP65Q6ZU64 1925 aaKnown RBP24.77■■□□□ 1.56
NOD1-202ENST00000411552 UNC13BO14795 1591 aa24.76■■□□□ 1.55
NOD1-202ENST00000411552 CEP170BQ9Y4F5 1589 aaPredicted RBP24.76■■□□□ 1.55
NOD1-202ENST00000411552 ARHGAP31Q2M1Z3 1444 aa24.76■■□□□ 1.55
NOD1-202ENST00000411552 SPATA31D1Q6ZQQ2 1576 aa24.75■■□□□ 1.55
NOD1-202ENST00000411552 ERVK-7P63135 1459 aa24.74■■□□□ 1.55
NOD1-202ENST00000411552 A2ML1A8K2U0 1454 aa24.71■■□□□ 1.55
NOD1-202ENST00000411552 EFCAB6Q5THR3 1501 aa24.71■■□□□ 1.55
NOD1-202ENST00000411552 NAIPQ13075 1403 aa24.7■■□□□ 1.55
NOD1-202ENST00000411552 STRCQ7RTU9 1775 aa24.7■■□□□ 1.55
NOD1-202ENST00000411552 GCC2Q8IWJ2 1684 aa24.7■■□□□ 1.54
NOD1-202ENST00000411552 NLRP1Q9C000 1473 aa24.68■■□□□ 1.54
NOD1-202ENST00000411552 HFM1A2PYH4 1435 aa24.68■■□□□ 1.54
NOD1-202ENST00000411552 TET3O43151 1660 aa24.67■■□□□ 1.54
NOD1-202ENST00000411552 IQGAP3Q86VI3 1631 aa24.66■■□□□ 1.54
NOD1-202ENST00000411552 NUP155O75694 1391 aa24.64■■□□□ 1.53
NOD1-202ENST00000411552 PLA2R1Q13018 1463 aa24.61■■□□□ 1.53
NOD1-202ENST00000411552 RPRD2Q5VT52 1461 aaKnown RBP24.61■■□□□ 1.53
NOD1-202ENST00000411552 UGGT1Q9NYU2 1555 aa24.61■■□□□ 1.53
NOD1-202ENST00000411552 NOS1P29475 1434 aa24.6■■□□□ 1.53
NOD1-202ENST00000411552 SYNMO15061 1565 aa24.59■■□□□ 1.53
NOD1-202ENST00000411552 E9PCH4 1651 aa24.58■■□□□ 1.53
NOD1-202ENST00000411552 DMRT2Q9Y5R5 561 aa24.56■■□□□ 1.52
NOD1-202ENST00000411552 NCKAP5LQ9HCH0 1330 aa24.56■■□□□ 1.52
NOD1-202ENST00000411552 UBR1Q8IWV7 1749 aa24.55■■□□□ 1.52
NOD1-202ENST00000411552 THEMISQ8N1K5 641 aaPredicted RBP24.55■■□□□ 1.52
NOD1-202ENST00000411552 FBXO41Q8TF61 875 aa24.54■■□□□ 1.52
NOD1-202ENST00000411552 PIK3C2BO00750 1634 aa24.53■■□□□ 1.52
NOD1-202ENST00000411552 PTPRTO14522 1441 aa24.53■■□□□ 1.52
NOD1-202ENST00000411552 PKD2Q13563 968 aa24.53■■□□□ 1.52
NOD1-202ENST00000411552 IDI1Q13907 227 aa24.51■■□□□ 1.51
NOD1-202ENST00000411552 POLR1AO95602 1720 aaPredicted RBP24.51■■□□□ 1.51
NOD1-202ENST00000411552 TRIM52Q96A61 297 aa24.49■■□□□ 1.51
NOD1-202ENST00000411552 SLC52A1Q9NWF4 448 aa24.48■■□□□ 1.51
NOD1-202ENST00000411552 KDM5AP29375 1690 aaKnown RBP24.47■■□□□ 1.51
NOD1-202ENST00000411552 NEURL4Q96JN8 1562 aa24.47■■□□□ 1.51
NOD1-202ENST00000411552 ANKLE2Q86XL3 938 aa24.46■■□□□ 1.51
NOD1-202ENST00000411552 ADGRB3O60242 1522 aa24.45■■□□□ 1.5
NOD1-202ENST00000411552 STAG3Q9UJ98 1225 aa24.44■■□□□ 1.5
NOD1-202ENST00000411552 SETD5Q9C0A6 1442 aa24.44■■□□□ 1.5
NOD1-202ENST00000411552 SLIT1O75093 1534 aa24.43■■□□□ 1.5
NOD1-202ENST00000411552 SPHKAPQ2M3C7 1700 aa24.43■■□□□ 1.5
NOD1-202ENST00000411552 ARHGAP23Q9P227 1491 aa24.43■■□□□ 1.5
NOD1-202ENST00000411552 MED14O60244 1454 aa24.4■■□□□ 1.5
NOD1-202ENST00000411552 TMEM2Q9UHN6 1383 aa24.4■■□□□ 1.5
NOD1-202ENST00000411552 MYO5BQ9ULV0 1848 aa24.4■■□□□ 1.5
NOD1-202ENST00000411552 SLC4A1APQ9BWU0 796 aaKnown RBP24.39■■□□□ 1.49
NOD1-202ENST00000411552 SCAF11Q99590 1463 aaKnown RBP24.38■■□□□ 1.49
NOD1-202ENST00000411552 NPHP4O75161 1426 aaPredicted RBP24.38■■□□□ 1.49
NOD1-202ENST00000411552 TMEM131LA2VDJ0 1609 aa24.38■■□□□ 1.49
NOD1-202ENST00000411552 LTKP29376 864 aa24.37■■□□□ 1.49
NOD1-202ENST00000411552 IQGAP1P46940 1657 aa24.37■■□□□ 1.49
NOD1-202ENST00000411552 TXNDC2Q86VQ3 553 aa24.36■■□□□ 1.49
NOD1-202ENST00000411552 RAB3GAP2Q9H2M9 1393 aa24.36■■□□□ 1.49
NOD1-202ENST00000411552 EID1Q9Y6B2 187 aa24.34■■□□□ 1.49
NOD1-202ENST00000411552 TRPM2O94759 1503 aa24.34■■□□□ 1.49
NOD1-202ENST00000411552 LTBP4Q8N2S1 1624 aa24.32■■□□□ 1.48
NOD1-202ENST00000411552 CHGAP10645 457 aaKnown RBP24.32■■□□□ 1.48
NOD1-202ENST00000411552 ZNF335Q9H4Z2 1342 aaPredicted RBP24.32■■□□□ 1.48
NOD1-202ENST00000411552 ACIN1Q9UKV3 1341 aaKnown RBP24.32■■□□□ 1.48
NOD1-202ENST00000411552 CLTCL1P53675 1640 aa24.32■■□□□ 1.48
NOD1-202ENST00000411552 MPHOSPH9Q99550 1183 aa24.31■■□□□ 1.48
NOD1-202ENST00000411552 ZFYVE9O95405 1425 aa24.29■■□□□ 1.48
NOD1-202ENST00000411552 FOXD1Q16676 465 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms