RNA–Protein interactions for RNA: ENST00000410704.1

RN7SKP54-201, Transcript of RNA, 7SK small nuclear pseudogene 54, humanhuman

BASIC

Gene RN7SKP54, Length 269 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP54-201ENST00000410704 BCORL1Q5H9F3 1711 aa14.97□□□□□ -0.01
RN7SKP54-201ENST00000410704 KANK1Q14678 1352 aa14.97□□□□□ -0.01
RN7SKP54-201ENST00000410704 GGT6Q6P531 493 aa14.96□□□□□ -0.01
RN7SKP54-201ENST00000410704 RNF17Q9BXT8 1623 aaKnown RBP14.95□□□□□ -0.02
RN7SKP54-201ENST00000410704 UNC13BO14795 1591 aa14.95□□□□□ -0.02
RN7SKP54-201ENST00000410704 NUP155O75694 1391 aa14.95□□□□□ -0.02
RN7SKP54-201ENST00000410704 DEPDC5O75140 1603 aa14.94□□□□□ -0.02
RN7SKP54-201ENST00000410704 MLECQ14165 292 aa14.93□□□□□ -0.02
RN7SKP54-201ENST00000410704 PRDM15P57071 1507 aaPredicted RBP14.92□□□□□ -0.02
RN7SKP54-201ENST00000410704 SIGLEC1Q9BZZ2 1709 aa14.92□□□□□ -0.02
RN7SKP54-201ENST00000410704 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
RN7SKP54-201ENST00000410704 ESF1Q9H501 851 aaKnown RBP14.91□□□□□ -0.02
RN7SKP54-201ENST00000410704 WASHC2CQ9Y4E1 1318 aa14.91□□□□□ -0.02
RN7SKP54-201ENST00000410704 MROH1Q8NDA8 1641 aa14.9□□□□□ -0.02
RN7SKP54-201ENST00000410704 KDM5DQ9BY66 1539 aa14.9□□□□□ -0.02
RN7SKP54-201ENST00000410704 IQGAP3Q86VI3 1631 aa14.89□□□□□ -0.03
RN7SKP54-201ENST00000410704 FAM135AQ9P2D6 1515 aa14.89□□□□□ -0.03
RN7SKP54-201ENST00000410704 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
RN7SKP54-201ENST00000410704 VWDEQ8N2E2 1590 aa14.87□□□□□ -0.03
RN7SKP54-201ENST00000410704 MPHOSPH9Q99550 1183 aa14.87□□□□□ -0.03
RN7SKP54-201ENST00000410704 PZPP20742 1482 aa14.87□□□□□ -0.03
RN7SKP54-201ENST00000410704 ZC3H13Q5T200 1668 aaKnown RBP14.87□□□□□ -0.03
RN7SKP54-201ENST00000410704 ABCC3O15438 1527 aa14.86□□□□□ -0.03
RN7SKP54-201ENST00000410704 LMTK2Q8IWU2 1503 aa14.85□□□□□ -0.03
RN7SKP54-201ENST00000410704 CNTLNQ9NXG0 1405 aa14.84□□□□□ -0.03
RN7SKP54-201ENST00000410704 CEP152O94986 1710 aa14.84□□□□□ -0.03
RN7SKP54-201ENST00000410704 TET3O43151 1660 aa14.84□□□□□ -0.03
RN7SKP54-201ENST00000410704 PKD2Q13563 968 aa14.83□□□□□ -0.04
RN7SKP54-201ENST00000410704 DHX57Q6P158 1386 aaKnown RBP14.83□□□□□ -0.04
RN7SKP54-201ENST00000410704 CLTCQ00610 1675 aaKnown RBP14.82□□□□□ -0.04
RN7SKP54-201ENST00000410704 CCER1Q8TC90 406 aaPredicted RBP14.82□□□□□ -0.04
RN7SKP54-201ENST00000410704 CAMSAP1Q5T5Y3 1602 aa14.81□□□□□ -0.04
RN7SKP54-201ENST00000410704 FER1L4A9Z1Z3 1794 aa14.81□□□□□ -0.04
RN7SKP54-201ENST00000410704 EFCAB6Q5THR3 1501 aa14.81□□□□□ -0.04
RN7SKP54-201ENST00000410704 MROH2AA6NES4 1674 aa14.79□□□□□ -0.04
RN7SKP54-201ENST00000410704 ADAMTSL3P82987 1691 aa14.79□□□□□ -0.04
RN7SKP54-201ENST00000410704 ARHGAP31Q2M1Z3 1444 aa14.79□□□□□ -0.04
RN7SKP54-201ENST00000410704 RPRD2Q5VT52 1461 aaKnown RBP14.79□□□□□ -0.04
RN7SKP54-201ENST00000410704 MADDQ8WXG6 1647 aa14.78□□□□□ -0.04
RN7SKP54-201ENST00000410704 ZMYM3Q14202 1370 aa14.78□□□□□ -0.04
RN7SKP54-201ENST00000410704 E9PCH4 1651 aa14.77□□□□□ -0.04
RN7SKP54-201ENST00000410704 FOXD1Q16676 465 aa14.77□□□□□ -0.05
RN7SKP54-201ENST00000410704 NPATQ14207 1427 aa14.76□□□□□ -0.05
RN7SKP54-201ENST00000410704 RIMS1Q86UR5 1692 aaKnown RBP14.76□□□□□ -0.05
RN7SKP54-201ENST00000410704 CLSPNQ9HAW4 1339 aa14.74□□□□□ -0.05
RN7SKP54-201ENST00000410704 C3P01024 1663 aa14.72□□□□□ -0.05
RN7SKP54-201ENST00000410704 PLPPR3Q6T4P5 718 aa14.72□□□□□ -0.05
RN7SKP54-201ENST00000410704 SPHKAPQ2M3C7 1700 aa14.72□□□□□ -0.05
RN7SKP54-201ENST00000410704 ANKRD30BQ9BXX2 1392 aa14.72□□□□□ -0.05
RN7SKP54-201ENST00000410704 ERVK-7P63135 1459 aa14.71□□□□□ -0.05
RN7SKP54-201ENST00000410704 CEBPAP49715 358 aaPredicted RBP14.71□□□□□ -0.05
RN7SKP54-201ENST00000410704 FBXO31Q5XUX0 539 aaPredicted RBP14.71□□□□□ -0.05
RN7SKP54-201ENST00000410704 PTPRTO14522 1441 aa14.71□□□□□ -0.05
RN7SKP54-201ENST00000410704 PREX1Q8TCU6 1659 aa14.71□□□□□ -0.06
RN7SKP54-201ENST00000410704 CCDC144AA2RUR9 1427 aa14.7□□□□□ -0.06
RN7SKP54-201ENST00000410704 NOS1P29475 1434 aa14.7□□□□□ -0.06
RN7SKP54-201ENST00000410704 TRPM2O94759 1503 aa14.7□□□□□ -0.06
RN7SKP54-201ENST00000410704 PTPRMP28827 1452 aa14.69□□□□□ -0.06
RN7SKP54-201ENST00000410704 SPATA31D1Q6ZQQ2 1576 aa14.69□□□□□ -0.06
RN7SKP54-201ENST00000410704 TNRQ92752 1358 aa14.69□□□□□ -0.06
RN7SKP54-201ENST00000410704 PLA2R1Q13018 1463 aa14.69□□□□□ -0.06
RN7SKP54-201ENST00000410704 KDM4FA0A1W2PPD8 638 aa14.68□□□□□ -0.06
RN7SKP54-201ENST00000410704 SLC52A1Q9NWF4 448 aa14.67□□□□□ -0.06
RN7SKP54-201ENST00000410704 CFAP65Q6ZU64 1925 aaKnown RBP14.66□□□□□ -0.06
RN7SKP54-201ENST00000410704 SYNMO15061 1565 aa14.66□□□□□ -0.06
RN7SKP54-201ENST00000410704 NEUROD1Q13562 356 aa14.66□□□□□ -0.06
RN7SKP54-201ENST00000410704 SIN3AQ96ST3 1273 aa14.65□□□□□ -0.06
RN7SKP54-201ENST00000410704 CLTCL1P53675 1640 aa14.64□□□□□ -0.07
RN7SKP54-201ENST00000410704 CHGAP10645 457 aaKnown RBP14.63□□□□□ -0.07
RN7SKP54-201ENST00000410704 UGGT1Q9NYU2 1555 aa14.63□□□□□ -0.07
RN7SKP54-201ENST00000410704 NLRP1Q9C000 1473 aa14.63□□□□□ -0.07
RN7SKP54-201ENST00000410704 PIK3C2BO00750 1634 aa14.63□□□□□ -0.07
RN7SKP54-201ENST00000410704 IDI1Q13907 227 aa14.62□□□□□ -0.07
RN7SKP54-201ENST00000410704 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
RN7SKP54-201ENST00000410704 TONSLQ96HA7 1378 aa14.6□□□□□ -0.07
RN7SKP54-201ENST00000410704 KIF1BO60333 1816 aa14.59□□□□□ -0.07
RN7SKP54-201ENST00000410704 MYO3AQ8NEV4 1616 aa14.59□□□□□ -0.07
RN7SKP54-201ENST00000410704 UHRF1BP1Q6BDS2 1440 aa14.58□□□□□ -0.08
RN7SKP54-201ENST00000410704 A2ML1A8K2U0 1454 aa14.57□□□□□ -0.08
RN7SKP54-201ENST00000410704 ADGRB3O60242 1522 aa14.57□□□□□ -0.08
RN7SKP54-201ENST00000410704 RGL3Q3MIN7 710 aa14.57□□□□□ -0.08
RN7SKP54-201ENST00000410704 ZNF326Q5BKZ1 582 aaKnown RBP14.57□□□□□ -0.08
RN7SKP54-201ENST00000410704 TIMELESSQ9UNS1 1208 aa14.57□□□□□ -0.08
RN7SKP54-201ENST00000410704 NEURL4Q96JN8 1562 aa14.56□□□□□ -0.08
RN7SKP54-201ENST00000410704 SPATA31E1Q6ZUB1 1445 aa14.56□□□□□ -0.08
RN7SKP54-201ENST00000410704 TMEM131LA2VDJ0 1609 aa14.55□□□□□ -0.08
RN7SKP54-201ENST00000410704 ZEB1P37275 1124 aaPredicted RBP14.55□□□□□ -0.08
RN7SKP54-201ENST00000410704 CEP170BQ9Y4F5 1589 aaPredicted RBP14.55□□□□□ -0.08
RN7SKP54-201ENST00000410704 KDM5AP29375 1690 aaKnown RBP14.55□□□□□ -0.08
RN7SKP54-201ENST00000410704 SETD1BQ9UPS6 1966 aaKnown RBP14.54□□□□□ -0.08
RN7SKP54-201ENST00000410704 THEMISQ8N1K5 641 aaPredicted RBP14.54□□□□□ -0.08
RN7SKP54-201ENST00000410704 RPGRIP1LQ68CZ1 1315 aa14.54□□□□□ -0.08
RN7SKP54-201ENST00000410704 UBR1Q8IWV7 1749 aa14.53□□□□□ -0.08
RN7SKP54-201ENST00000410704 ZNF142P52746 1687 aaPredicted RBP14.53□□□□□ -0.08
RN7SKP54-201ENST00000410704 HDGFP51858 240 aaKnown RBP14.52□□□□□ -0.09
RN7SKP54-201ENST00000410704 L3MBTL2Q969R5 705 aa14.52□□□□□ -0.09
RN7SKP54-201ENST00000410704 DCAF11Q8TEB1 546 aa14.51□□□□□ -0.09
RN7SKP54-201ENST00000410704 STAC3Q96MF2 364 aa14.51□□□□□ -0.09
RN7SKP54-201ENST00000410704 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.5□□□□□ -0.09
RN7SKP54-201ENST00000410704 KDM2AQ9Y2K7 1162 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms