RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 PPP6R1Q9UPN7 881 aa21.56■■□□□ 1.04
GYPC-203ENST00000409836 CLTCQ00610 1675 aaKnown RBP21.56■■□□□ 1.04
GYPC-203ENST00000409836 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
GYPC-203ENST00000409836 FAM50AQ14320 339 aaKnown RBP21.52■■□□□ 1.04
GYPC-203ENST00000409836 VWDEQ8N2E2 1590 aa21.52■■□□□ 1.04
GYPC-203ENST00000409836 PREX1Q8TCU6 1659 aa21.5■■□□□ 1.03
GYPC-203ENST00000409836 ABCC3O15438 1527 aa21.5■■□□□ 1.03
GYPC-203ENST00000409836 SETD1BQ9UPS6 1966 aaKnown RBP21.49■■□□□ 1.03
GYPC-203ENST00000409836 PPARGC1BQ86YN6 1023 aaKnown RBP21.49■■□□□ 1.03
GYPC-203ENST00000409836 GCC2Q8IWJ2 1684 aa21.49■■□□□ 1.03
GYPC-203ENST00000409836 UNC13BO14795 1591 aa21.48■■□□□ 1.03
GYPC-203ENST00000409836 NPATQ14207 1427 aa21.48■■□□□ 1.03
GYPC-203ENST00000409836 MLECQ14165 292 aa21.48■■□□□ 1.03
GYPC-203ENST00000409836 LMTK2Q8IWU2 1503 aa21.45■■□□□ 1.02
GYPC-203ENST00000409836 CAMSAP1Q5T5Y3 1602 aa21.45■■□□□ 1.02
GYPC-203ENST00000409836 KIF3BO15066 747 aa21.45■■□□□ 1.02
GYPC-203ENST00000409836 CEP152O94986 1710 aa21.45■■□□□ 1.02
GYPC-203ENST00000409836 ANKRD50Q9ULJ7 1429 aa21.45■■□□□ 1.02
GYPC-203ENST00000409836 PZPP20742 1482 aa21.45■■□□□ 1.02
GYPC-203ENST00000409836 LMTK3Q96Q04 1460 aa21.45■■□□□ 1.02
GYPC-203ENST00000409836 ZNF142P52746 1687 aaPredicted RBP21.44■■□□□ 1.02
GYPC-203ENST00000409836 RRP7BPQ9NSQ0 103 aa21.42■■□□□ 1.02
GYPC-203ENST00000409836 ZMYM3Q14202 1370 aa21.41■■□□□ 1.02
GYPC-203ENST00000409836 CHIC2Q9UKJ5 165 aa21.4■■□□□ 1.02
GYPC-203ENST00000409836 MYO3AQ8NEV4 1616 aa21.4■■□□□ 1.02
GYPC-203ENST00000409836 ARHGAP31Q2M1Z3 1444 aa21.39■■□□□ 1.02
GYPC-203ENST00000409836 GGT6Q6P531 493 aa21.39■■□□□ 1.01
GYPC-203ENST00000409836 HFM1A2PYH4 1435 aa21.38■■□□□ 1.01
GYPC-203ENST00000409836 SPATA31D1Q6ZQQ2 1576 aa21.38■■□□□ 1.01
GYPC-203ENST00000409836 IQGAP3Q86VI3 1631 aa21.37■■□□□ 1.01
GYPC-203ENST00000409836 ESF1Q9H501 851 aaKnown RBP21.37■■□□□ 1.01
GYPC-203ENST00000409836 EFCAB6Q5THR3 1501 aa21.37■■□□□ 1.01
GYPC-203ENST00000409836 TET3O43151 1660 aa21.36■■□□□ 1.01
GYPC-203ENST00000409836 NAIPQ13075 1403 aa21.36■■□□□ 1.01
GYPC-203ENST00000409836 UHRF1BP1Q6BDS2 1440 aa21.32■■□□□ 1
GYPC-203ENST00000409836 WASHC2CQ9Y4E1 1318 aa21.31■■□□□ 1
GYPC-203ENST00000409836 CEBPAP49715 358 aaPredicted RBP21.31■■□□□ 1
GYPC-203ENST00000409836 ERVK-7P63135 1459 aa21.31■■□□□ 1
GYPC-203ENST00000409836 RPRD2Q5VT52 1461 aaKnown RBP21.31■■□□□ 1
GYPC-203ENST00000409836 CEP170BQ9Y4F5 1589 aaPredicted RBP21.31■■□□□ 1
GYPC-203ENST00000409836 KANK1Q14678 1352 aa21.3■■□□□ 1
GYPC-203ENST00000409836 NLRP1Q9C000 1473 aa21.27■■□□□ 1
GYPC-203ENST00000409836 KDM5AP29375 1690 aaKnown RBP21.25■□□□□ 0.99
GYPC-203ENST00000409836 A2ML1A8K2U0 1454 aa21.25■□□□□ 0.99
GYPC-203ENST00000409836 E9PCH4 1651 aa21.24■□□□□ 0.99
GYPC-203ENST00000409836 TNRQ92752 1358 aa21.23■□□□□ 0.99
GYPC-203ENST00000409836 ITGAEP38570 1179 aa21.23■□□□□ 0.99
GYPC-203ENST00000409836 NOS1P29475 1434 aa21.22■□□□□ 0.99
GYPC-203ENST00000409836 SYNMO15061 1565 aa21.22■□□□□ 0.99
GYPC-203ENST00000409836 PLA2R1Q13018 1463 aa21.21■□□□□ 0.99
GYPC-203ENST00000409836 STRCQ7RTU9 1775 aa21.2■□□□□ 0.98
GYPC-203ENST00000409836 PIK3C2BO00750 1634 aa21.19■□□□□ 0.98
GYPC-203ENST00000409836 UBR1Q8IWV7 1749 aa21.18■□□□□ 0.98
GYPC-203ENST00000409836 CFAP65Q6ZU64 1925 aaKnown RBP21.17■□□□□ 0.98
GYPC-203ENST00000409836 FBXO31Q5XUX0 539 aaPredicted RBP21.16■□□□□ 0.98
GYPC-203ENST00000409836 NUP155O75694 1391 aa21.14■□□□□ 0.98
GYPC-203ENST00000409836 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
GYPC-203ENST00000409836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.14■□□□□ 0.97
GYPC-203ENST00000409836 POLR1AO95602 1720 aaPredicted RBP21.14■□□□□ 0.97
GYPC-203ENST00000409836 SPHKAPQ2M3C7 1700 aa21.14■□□□□ 0.97
GYPC-203ENST00000409836 UGGT1Q9NYU2 1555 aa21.14■□□□□ 0.97
GYPC-203ENST00000409836 ACIN1Q9UKV3 1341 aaKnown RBP21.1■□□□□ 0.97
GYPC-203ENST00000409836 ADGRB3O60242 1522 aa21.1■□□□□ 0.97
GYPC-203ENST00000409836 PTPRTO14522 1441 aa21.09■□□□□ 0.97
GYPC-203ENST00000409836 SETD5Q9C0A6 1442 aa21.09■□□□□ 0.97
GYPC-203ENST00000409836 SLIT1O75093 1534 aa21.09■□□□□ 0.97
GYPC-203ENST00000409836 HSPA2P54652 639 aa21.08■□□□□ 0.97
GYPC-203ENST00000409836 NEURL4Q96JN8 1562 aa21.08■□□□□ 0.97
GYPC-203ENST00000409836 TRPM2O94759 1503 aa21.08■□□□□ 0.96
GYPC-203ENST00000409836 ARHGAP23Q9P227 1491 aa21.07■□□□□ 0.96
GYPC-203ENST00000409836 TMEM131LA2VDJ0 1609 aa21.04■□□□□ 0.96
GYPC-203ENST00000409836 MED14O60244 1454 aa21.03■□□□□ 0.96
GYPC-203ENST00000409836 MYO5BQ9ULV0 1848 aa21.01■□□□□ 0.95
GYPC-203ENST00000409836 RAB3GAP2Q9H2M9 1393 aa21.01■□□□□ 0.95
GYPC-203ENST00000409836 SLC52A1Q9NWF4 448 aa21.01■□□□□ 0.95
GYPC-203ENST00000409836 CLTCL1P53675 1640 aa21■□□□□ 0.95
GYPC-203ENST00000409836 HRCP23327 699 aa20.98■□□□□ 0.95
GYPC-203ENST00000409836 PKD2Q13563 968 aa20.98■□□□□ 0.95
GYPC-203ENST00000409836 IQGAP1P46940 1657 aa20.97■□□□□ 0.95
GYPC-203ENST00000409836 THEMISQ8N1K5 641 aaPredicted RBP20.97■□□□□ 0.95
GYPC-203ENST00000409836 SCAF11Q99590 1463 aaKnown RBP20.95■□□□□ 0.94
GYPC-203ENST00000409836 IDI1Q13907 227 aa20.95■□□□□ 0.94
GYPC-203ENST00000409836 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
GYPC-203ENST00000409836 DMRT2Q9Y5R5 561 aa20.94■□□□□ 0.94
GYPC-203ENST00000409836 TMEM2Q9UHN6 1383 aa20.94■□□□□ 0.94
GYPC-203ENST00000409836 KIF1BO60333 1816 aa20.92■□□□□ 0.94
GYPC-203ENST00000409836 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
GYPC-203ENST00000409836 TRIM52Q96A61 297 aa20.89■□□□□ 0.93
GYPC-203ENST00000409836 NPHP4O75161 1426 aaPredicted RBP20.88■□□□□ 0.93
GYPC-203ENST00000409836 LTBP4Q8N2S1 1624 aa20.88■□□□□ 0.93
GYPC-203ENST00000409836 ANKLE2Q86XL3 938 aa20.87■□□□□ 0.93
GYPC-203ENST00000409836 MPHOSPH9Q99550 1183 aa20.86■□□□□ 0.93
GYPC-203ENST00000409836 NCKAP5LQ9HCH0 1330 aa20.85■□□□□ 0.93
GYPC-203ENST00000409836 NEXMIFQ5QGS0 1516 aa20.84■□□□□ 0.93
GYPC-203ENST00000409836 IFT172Q9UG01 1749 aa20.82■□□□□ 0.92
GYPC-203ENST00000409836 DIP2AQ14689 1571 aa20.82■□□□□ 0.92
GYPC-203ENST00000409836 RIMS2Q9UQ26 1411 aa20.82■□□□□ 0.92
GYPC-203ENST00000409836 PPLO60437 1756 aa20.81■□□□□ 0.92
GYPC-203ENST00000409836 SETBP1Q9Y6X0 1596 aa20.8■□□□□ 0.92
GYPC-203ENST00000409836 CCDC144AA2RUR9 1427 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms