RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 TRIM52Q96A61 297 aa20.46■□□□□ 0.87
LIMS2-206ENST00000409754 DHX29Q7Z478 1369 aaKnown RBP20.46■□□□□ 0.87
LIMS2-206ENST00000409754 ZNF316A6NFI3 1004 aaPredicted RBP20.45■□□□□ 0.86
LIMS2-206ENST00000409754 SIN3AQ96ST3 1273 aa20.45■□□□□ 0.86
LIMS2-206ENST00000409754 MROH1Q8NDA8 1641 aa20.44■□□□□ 0.86
LIMS2-206ENST00000409754 KIF15Q9NS87 1388 aa20.44■□□□□ 0.86
LIMS2-206ENST00000409754 DUOX2Q9NRD8 1548 aa20.44■□□□□ 0.86
LIMS2-206ENST00000409754 EIF2AK4Q9P2K8 1649 aaKnown RBP20.43■□□□□ 0.86
LIMS2-206ENST00000409754 FER1L4A9Z1Z3 1794 aa20.43■□□□□ 0.86
LIMS2-206ENST00000409754 RNF17Q9BXT8 1623 aaKnown RBP20.42■□□□□ 0.86
LIMS2-206ENST00000409754 MPHOSPH9Q99550 1183 aa20.42■□□□□ 0.86
LIMS2-206ENST00000409754 NEUROD1Q13562 356 aa20.41■□□□□ 0.86
LIMS2-206ENST00000409754 ARID4BQ4LE39 1312 aaPredicted RBP20.41■□□□□ 0.86
LIMS2-206ENST00000409754 ANKRD50Q9ULJ7 1429 aa20.41■□□□□ 0.86
LIMS2-206ENST00000409754 RIMS1Q86UR5 1692 aaKnown RBP20.4■□□□□ 0.86
LIMS2-206ENST00000409754 DEPDC5O75140 1603 aa20.38■□□□□ 0.85
LIMS2-206ENST00000409754 MLECQ14165 292 aa20.38■□□□□ 0.85
LIMS2-206ENST00000409754 ERBINQ96RT1 1412 aa20.37■□□□□ 0.85
LIMS2-206ENST00000409754 PZPP20742 1482 aa20.34■□□□□ 0.85
LIMS2-206ENST00000409754 CLTCQ00610 1675 aaKnown RBP20.34■□□□□ 0.85
LIMS2-206ENST00000409754 PRDM15P57071 1507 aaPredicted RBP20.34■□□□□ 0.85
LIMS2-206ENST00000409754 PTPRMP28827 1452 aa20.33■□□□□ 0.84
LIMS2-206ENST00000409754 KIF3BO15066 747 aa20.32■□□□□ 0.84
LIMS2-206ENST00000409754 TONSLQ96HA7 1378 aa20.32■□□□□ 0.84
LIMS2-206ENST00000409754 SLC4A1APQ9BWU0 796 aaKnown RBP20.31■□□□□ 0.84
LIMS2-206ENST00000409754 CEP152O94986 1710 aa20.3■□□□□ 0.84
LIMS2-206ENST00000409754 KDM5DQ9BY66 1539 aa20.3■□□□□ 0.84
LIMS2-206ENST00000409754 MROH2AA6NES4 1674 aa20.3■□□□□ 0.84
LIMS2-206ENST00000409754 C3P01024 1663 aa20.3■□□□□ 0.84
LIMS2-206ENST00000409754 UNC13BO14795 1591 aa20.3■□□□□ 0.84
LIMS2-206ENST00000409754 VWDEQ8N2E2 1590 aa20.3■□□□□ 0.84
LIMS2-206ENST00000409754 ANKRD30BQ9BXX2 1392 aa20.29■□□□□ 0.84
LIMS2-206ENST00000409754 PPP1R15AO75807 674 aaPredicted RBP20.29■□□□□ 0.84
LIMS2-206ENST00000409754 ABCC3O15438 1527 aa20.28■□□□□ 0.84
LIMS2-206ENST00000409754 DIEXFQ68CQ4 756 aaKnown RBP20.27■□□□□ 0.84
LIMS2-206ENST00000409754 GGT6Q6P531 493 aa20.27■□□□□ 0.84
LIMS2-206ENST00000409754 ZC3H13Q5T200 1668 aaKnown RBP20.26■□□□□ 0.83
LIMS2-206ENST00000409754 FAM135AQ9P2D6 1515 aa20.26■□□□□ 0.83
LIMS2-206ENST00000409754 NUP155O75694 1391 aa20.25■□□□□ 0.83
LIMS2-206ENST00000409754 FOXD1Q16676 465 aa20.24■□□□□ 0.83
LIMS2-206ENST00000409754 CAMSAP1Q5T5Y3 1602 aa20.23■□□□□ 0.83
LIMS2-206ENST00000409754 CNTLNQ9NXG0 1405 aa20.22■□□□□ 0.83
LIMS2-206ENST00000409754 RPRD2Q5VT52 1461 aaKnown RBP20.22■□□□□ 0.83
LIMS2-206ENST00000409754 CEBPAP49715 358 aaPredicted RBP20.2■□□□□ 0.82
LIMS2-206ENST00000409754 IQGAP3Q86VI3 1631 aa20.2■□□□□ 0.82
LIMS2-206ENST00000409754 LMTK2Q8IWU2 1503 aa20.2■□□□□ 0.82
LIMS2-206ENST00000409754 PKD2Q13563 968 aa20.2■□□□□ 0.82
LIMS2-206ENST00000409754 ZMYM3Q14202 1370 aa20.18■□□□□ 0.82
LIMS2-206ENST00000409754 EFCAB6Q5THR3 1501 aa20.17■□□□□ 0.82
LIMS2-206ENST00000409754 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
LIMS2-206ENST00000409754 TET3O43151 1660 aa20.15■□□□□ 0.82
LIMS2-206ENST00000409754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.14■□□□□ 0.81
LIMS2-206ENST00000409754 WASHC2CQ9Y4E1 1318 aa20.14■□□□□ 0.81
LIMS2-206ENST00000409754 NPATQ14207 1427 aa20.13■□□□□ 0.81
LIMS2-206ENST00000409754 E9PCH4 1651 aa20.12■□□□□ 0.81
LIMS2-206ENST00000409754 PREX1Q8TCU6 1659 aa20.12■□□□□ 0.81
LIMS2-206ENST00000409754 PLPPR3Q6T4P5 718 aa20.12■□□□□ 0.81
LIMS2-206ENST00000409754 CFAP65Q6ZU64 1925 aaKnown RBP20.11■□□□□ 0.81
LIMS2-206ENST00000409754 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
LIMS2-206ENST00000409754 ARHGAP31Q2M1Z3 1444 aa20.11■□□□□ 0.81
LIMS2-206ENST00000409754 SPATA31D1Q6ZQQ2 1576 aa20.1■□□□□ 0.81
LIMS2-206ENST00000409754 MYO3AQ8NEV4 1616 aa20.09■□□□□ 0.81
LIMS2-206ENST00000409754 ERVK-7P63135 1459 aa20.09■□□□□ 0.81
LIMS2-206ENST00000409754 FBXO31Q5XUX0 539 aaPredicted RBP20.09■□□□□ 0.81
LIMS2-206ENST00000409754 LMTK3Q96Q04 1460 aa20.08■□□□□ 0.81
LIMS2-206ENST00000409754 KANK1Q14678 1352 aa20.07■□□□□ 0.8
LIMS2-206ENST00000409754 SYNMO15061 1565 aa20.07■□□□□ 0.8
LIMS2-206ENST00000409754 ESF1Q9H501 851 aaKnown RBP20.07■□□□□ 0.8
LIMS2-206ENST00000409754 SETD1BQ9UPS6 1966 aaKnown RBP20.05■□□□□ 0.8
LIMS2-206ENST00000409754 ZNF142P52746 1687 aaPredicted RBP20.05■□□□□ 0.8
LIMS2-206ENST00000409754 NOS1P29475 1434 aa20.03■□□□□ 0.8
LIMS2-206ENST00000409754 AEBP2Q6ZN18 517 aaPredicted RBP20.02■□□□□ 0.8
LIMS2-206ENST00000409754 CEP170BQ9Y4F5 1589 aaPredicted RBP20■□□□□ 0.79
LIMS2-206ENST00000409754 TNRQ92752 1358 aa20■□□□□ 0.79
LIMS2-206ENST00000409754 UGGT1Q9NYU2 1555 aa20■□□□□ 0.79
LIMS2-206ENST00000409754 SPHKAPQ2M3C7 1700 aa19.98■□□□□ 0.79
LIMS2-206ENST00000409754 PIK3C2BO00750 1634 aa19.98■□□□□ 0.79
LIMS2-206ENST00000409754 PLA2R1Q13018 1463 aa19.97■□□□□ 0.79
LIMS2-206ENST00000409754 UHRF1BP1Q6BDS2 1440 aa19.97■□□□□ 0.79
LIMS2-206ENST00000409754 CCDC144AA2RUR9 1427 aa19.96■□□□□ 0.79
LIMS2-206ENST00000409754 NBPF8Q3BBV2 869 aa19.95■□□□□ 0.78
LIMS2-206ENST00000409754 A2ML1A8K2U0 1454 aa19.95■□□□□ 0.78
LIMS2-206ENST00000409754 UBR1Q8IWV7 1749 aa19.94■□□□□ 0.78
LIMS2-206ENST00000409754 PTPRTO14522 1441 aa19.94■□□□□ 0.78
LIMS2-206ENST00000409754 NLRP1Q9C000 1473 aa19.93■□□□□ 0.78
LIMS2-206ENST00000409754 CLTCL1P53675 1640 aa19.92■□□□□ 0.78
LIMS2-206ENST00000409754 MYO5BQ9ULV0 1848 aa19.91■□□□□ 0.78
LIMS2-206ENST00000409754 HSPA2P54652 639 aa19.91■□□□□ 0.78
LIMS2-206ENST00000409754 MIER1Q8N108 512 aa19.91■□□□□ 0.78
LIMS2-206ENST00000409754 TRPM2O94759 1503 aa19.91■□□□□ 0.78
LIMS2-206ENST00000409754 STRCQ7RTU9 1775 aa19.9■□□□□ 0.78
LIMS2-206ENST00000409754 EIF4G2P78344 907 aaKnown RBP eCLIP19.9■□□□□ 0.78
LIMS2-206ENST00000409754 KDM5AP29375 1690 aaKnown RBP19.88■□□□□ 0.77
LIMS2-206ENST00000409754 HIRIP3Q9BW71 556 aaPredicted RBP19.88■□□□□ 0.77
LIMS2-206ENST00000409754 HSPA5P11021 654 aaKnown RBP19.87■□□□□ 0.77
LIMS2-206ENST00000409754 TMEM131LA2VDJ0 1609 aa19.87■□□□□ 0.77
LIMS2-206ENST00000409754 ADGRB3O60242 1522 aa19.87■□□□□ 0.77
LIMS2-206ENST00000409754 IDI1Q13907 227 aa19.86■□□□□ 0.77
LIMS2-206ENST00000409754 RALGAPBQ86X10 1494 aa19.84■□□□□ 0.77
LIMS2-206ENST00000409754 SPATA31E1Q6ZUB1 1445 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms