RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 FOXD4L1Q9NU39 408 aa14.75□□□□□ -0.05
NIF3L1-204ENST00000409357 INO80Q9ULG1 1556 aaPredicted RBP14.75□□□□□ -0.05
NIF3L1-204ENST00000409357 TIMELESSQ9UNS1 1208 aa14.74□□□□□ -0.05
NIF3L1-204ENST00000409357 REREQ9P2R6 1566 aa14.74□□□□□ -0.05
NIF3L1-204ENST00000409357 KIAA1107Q9UPP5 1409 aa14.74□□□□□ -0.05
NIF3L1-204ENST00000409357 RRBP1Q9P2E9 1410 aaKnown RBP14.73□□□□□ -0.05
NIF3L1-204ENST00000409357 ANO8Q9HCE9 1232 aaPredicted RBP14.73□□□□□ -0.05
NIF3L1-204ENST00000409357 ATP7AQ04656 1500 aa14.73□□□□□ -0.05
NIF3L1-204ENST00000409357 MAP3K1Q13233 1512 aa14.73□□□□□ -0.05
NIF3L1-204ENST00000409357 MBD5Q9P267 1494 aa14.73□□□□□ -0.05
NIF3L1-204ENST00000409357 CAMSAP2Q08AD1 1489 aa14.72□□□□□ -0.05
NIF3L1-204ENST00000409357 PLEKHH2Q8IVE3 1493 aa14.72□□□□□ -0.05
NIF3L1-204ENST00000409357 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
NIF3L1-204ENST00000409357 SPAG9O60271 1321 aaKnown RBP14.69□□□□□ -0.06
NIF3L1-204ENST00000409357 SLC24A1O60721 1099 aa14.69□□□□□ -0.06
NIF3L1-204ENST00000409357 PPP1R15AO75807 674 aaPredicted RBP14.69□□□□□ -0.06
NIF3L1-204ENST00000409357 PLXNC1O60486 1568 aa14.68□□□□□ -0.06
NIF3L1-204ENST00000409357 AGLP35573 1532 aa14.68□□□□□ -0.06
NIF3L1-204ENST00000409357 ADGBQ8N7X0 1667 aa14.67□□□□□ -0.06
NIF3L1-204ENST00000409357 LMTK3Q96Q04 1460 aa14.66□□□□□ -0.06
NIF3L1-204ENST00000409357 CCDC141Q6ZP82 1450 aa14.65□□□□□ -0.06
NIF3L1-204ENST00000409357 NOP58Q9Y2X3 529 aaKnown RBP14.65□□□□□ -0.06
NIF3L1-204ENST00000409357 MYOM3Q5VTT5 1437 aa14.64□□□□□ -0.07
NIF3L1-204ENST00000409357 CEBPAP49715 358 aaPredicted RBP14.64□□□□□ -0.07
NIF3L1-204ENST00000409357 PPP4R2Q9NY27 417 aa14.64□□□□□ -0.07
NIF3L1-204ENST00000409357 A2MP01023 1474 aa14.63□□□□□ -0.07
NIF3L1-204ENST00000409357 C3P01024 1663 aa14.63□□□□□ -0.07
NIF3L1-204ENST00000409357 ARHGEF5Q12774 1597 aa14.63□□□□□ -0.07
NIF3L1-204ENST00000409357 ITGAEP38570 1179 aa14.61□□□□□ -0.07
NIF3L1-204ENST00000409357 C11orf95C9JLR9 678 aaPredicted RBP14.6□□□□□ -0.07
NIF3L1-204ENST00000409357 RTEL1-TNFRSF6BF6WH68 1400 aa14.6□□□□□ -0.07
NIF3L1-204ENST00000409357 CLTCQ00610 1675 aaKnown RBP14.59□□□□□ -0.07
NIF3L1-204ENST00000409357 ANP32CO43423 234 aa14.58□□□□□ -0.07
NIF3L1-204ENST00000409357 SALL2Q9Y467 1007 aaPredicted RBP14.58□□□□□ -0.07
NIF3L1-204ENST00000409357 MIA2Q96PC5 1412 aa14.58□□□□□ -0.08
NIF3L1-204ENST00000409357 PTPN23Q9H3S7 1636 aa14.58□□□□□ -0.08
NIF3L1-204ENST00000409357 PREX1Q8TCU6 1659 aa14.58□□□□□ -0.08
NIF3L1-204ENST00000409357 HSPA2P54652 639 aa14.57□□□□□ -0.08
NIF3L1-204ENST00000409357 WASHC2AQ641Q2 1341 aa14.56□□□□□ -0.08
NIF3L1-204ENST00000409357 MROH2AA6NES4 1674 aa14.56□□□□□ -0.08
NIF3L1-204ENST00000409357 CROCC2H7BZ55 1655 aa14.56□□□□□ -0.08
NIF3L1-204ENST00000409357 MAST1Q9Y2H9 1570 aa14.55□□□□□ -0.08
NIF3L1-204ENST00000409357 USP35Q9P2H5 1018 aa14.55□□□□□ -0.08
NIF3L1-204ENST00000409357 FGD6Q6ZV73 1430 aa14.55□□□□□ -0.08
NIF3L1-204ENST00000409357 DHX29Q7Z478 1369 aaKnown RBP14.54□□□□□ -0.08
NIF3L1-204ENST00000409357 GGT6Q6P531 493 aa14.53□□□□□ -0.08
NIF3L1-204ENST00000409357 DDX10Q13206 875 aaKnown RBP14.52□□□□□ -0.08
NIF3L1-204ENST00000409357 SETD1BQ9UPS6 1966 aaKnown RBP14.52□□□□□ -0.08
NIF3L1-204ENST00000409357 CNTLNQ9NXG0 1405 aa14.52□□□□□ -0.08
NIF3L1-204ENST00000409357 DNMT1P26358 1616 aaKnown RBP14.52□□□□□ -0.09
NIF3L1-204ENST00000409357 RTL5Q5HYW3 569 aaPredicted RBP14.52□□□□□ -0.09
NIF3L1-204ENST00000409357 RSPH4AQ5TD94 716 aa14.52□□□□□ -0.09
NIF3L1-204ENST00000409357 TCOF1Q13428 1488 aaKnown RBP14.52□□□□□ -0.09
NIF3L1-204ENST00000409357 ABCC5O15440 1437 aa14.51□□□□□ -0.09
NIF3L1-204ENST00000409357 ESF1Q9H501 851 aaKnown RBP14.51□□□□□ -0.09
NIF3L1-204ENST00000409357 ZMYM3Q14202 1370 aa14.5□□□□□ -0.09
NIF3L1-204ENST00000409357 TSPY4P0CV99 314 aa14.5□□□□□ -0.09
NIF3L1-204ENST00000409357 TSPY10P0CW01 314 aa14.5□□□□□ -0.09
NIF3L1-204ENST00000409357 WASHC2CQ9Y4E1 1318 aa14.5□□□□□ -0.09
NIF3L1-204ENST00000409357 KIF3BO15066 747 aa14.49□□□□□ -0.09
NIF3L1-204ENST00000409357 HOXD11P31277 338 aaPredicted RBP14.49□□□□□ -0.09
NIF3L1-204ENST00000409357 DAPK1P53355 1430 aa14.49□□□□□ -0.09
NIF3L1-204ENST00000409357 DMRT2Q9Y5R5 561 aa14.49□□□□□ -0.09
NIF3L1-204ENST00000409357 RNF17Q9BXT8 1623 aaKnown RBP14.48□□□□□ -0.09
NIF3L1-204ENST00000409357 SHANK2Q9UPX8 1470 aa14.48□□□□□ -0.09
NIF3L1-204ENST00000409357 UHRF1BP1Q6BDS2 1440 aa14.48□□□□□ -0.09
NIF3L1-204ENST00000409357 STRCQ7RTU9 1775 aa14.48□□□□□ -0.09
NIF3L1-204ENST00000409357 IPO9Q96P70 1041 aaKnown RBP14.48□□□□□ -0.09
NIF3L1-204ENST00000409357 MROH1Q8NDA8 1641 aa14.48□□□□□ -0.09
NIF3L1-204ENST00000409357 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
NIF3L1-204ENST00000409357 TRIM52Q96A61 297 aa14.47□□□□□ -0.09
NIF3L1-204ENST00000409357 KDM5DQ9BY66 1539 aa14.47□□□□□ -0.09
NIF3L1-204ENST00000409357 MYO3AQ8NEV4 1616 aa14.47□□□□□ -0.09
NIF3L1-204ENST00000409357 EIF2AK4Q9P2K8 1649 aaKnown RBP14.46□□□□□ -0.09
NIF3L1-204ENST00000409357 PTPRKQ15262 1439 aa14.46□□□□□ -0.09
NIF3L1-204ENST00000409357 NPATQ14207 1427 aa14.45□□□□□ -0.1
NIF3L1-204ENST00000409357 KIF15Q9NS87 1388 aa14.44□□□□□ -0.1
NIF3L1-204ENST00000409357 DUOX2Q9NRD8 1548 aa14.44□□□□□ -0.1
NIF3L1-204ENST00000409357 CEP152O94986 1710 aa14.43□□□□□ -0.1
NIF3L1-204ENST00000409357 ZNF142P52746 1687 aaPredicted RBP14.43□□□□□ -0.1
NIF3L1-204ENST00000409357 RAB3GAP2Q9H2M9 1393 aa14.43□□□□□ -0.1
NIF3L1-204ENST00000409357 SETD5Q9C0A6 1442 aa14.43□□□□□ -0.1
NIF3L1-204ENST00000409357 CCDC136Q96JN2 1154 aa14.42□□□□□ -0.1
NIF3L1-204ENST00000409357 RRP7BPQ9NSQ0 103 aa14.42□□□□□ -0.1
NIF3L1-204ENST00000409357 CHIC2Q9UKJ5 165 aa14.42□□□□□ -0.1
NIF3L1-204ENST00000409357 ABCC3O15438 1527 aa14.42□□□□□ -0.1
NIF3L1-204ENST00000409357 PAK3O75914 559 aaPredicted RBP14.42□□□□□ -0.1
NIF3L1-204ENST00000409357 ANP32AP39687 249 aaKnown RBP14.42□□□□□ -0.1
NIF3L1-204ENST00000409357 FAM50AQ14320 339 aaKnown RBP14.41□□□□□ -0.1
NIF3L1-204ENST00000409357 FBXO31Q5XUX0 539 aaPredicted RBP14.41□□□□□ -0.1
NIF3L1-204ENST00000409357 FAM135AQ9P2D6 1515 aa14.41□□□□□ -0.1
NIF3L1-204ENST00000409357 CEP170BQ9Y4F5 1589 aaPredicted RBP14.41□□□□□ -0.1
NIF3L1-204ENST00000409357 ZC3H13Q5T200 1668 aaKnown RBP14.4□□□□□ -0.1
NIF3L1-204ENST00000409357 PZPP20742 1482 aa14.4□□□□□ -0.1
NIF3L1-204ENST00000409357 PRDM15P57071 1507 aaPredicted RBP14.4□□□□□ -0.1
NIF3L1-204ENST00000409357 ZBTB47Q9UFB7 747 aaPredicted RBP14.39□□□□□ -0.11
NIF3L1-204ENST00000409357 DEPDC5O75140 1603 aa14.39□□□□□ -0.11
NIF3L1-204ENST00000409357 ERBINQ96RT1 1412 aa14.39□□□□□ -0.11
NIF3L1-204ENST00000409357 CFAP65Q6ZU64 1925 aaKnown RBP14.39□□□□□ -0.11
NIF3L1-204ENST00000409357 CAMSAP1Q5T5Y3 1602 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms