RNA–Protein interactions for RNA: ENST00000405384.6

ATL2-203, Transcript of atlastin GTPase 2, humanhuman

TSL 1 (best)

Gene ATL2, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-203ENST00000405384 RAB3GAP2Q9H2M9 1393 aa20.18■□□□□ 0.82
ATL2-203ENST00000405384 RNF17Q9BXT8 1623 aaKnown RBP20.17■□□□□ 0.82
ATL2-203ENST00000405384 MROH1Q8NDA8 1641 aa20.17■□□□□ 0.82
ATL2-203ENST00000405384 DEPDC5O75140 1603 aa20.14■□□□□ 0.82
ATL2-203ENST00000405384 PRDM15P57071 1507 aaPredicted RBP20.12■□□□□ 0.81
ATL2-203ENST00000405384 UNC13BO14795 1591 aa20.12■□□□□ 0.81
ATL2-203ENST00000405384 TRIM52Q96A61 297 aa20.12■□□□□ 0.81
ATL2-203ENST00000405384 ADAMTSL3P82987 1691 aa20.12■□□□□ 0.81
ATL2-203ENST00000405384 KDM4FA0A1W2PPD8 638 aa20.12■□□□□ 0.81
ATL2-203ENST00000405384 WASHC2CQ9Y4E1 1318 aa20.11■□□□□ 0.81
ATL2-203ENST00000405384 NUP155O75694 1391 aa20.11■□□□□ 0.81
ATL2-203ENST00000405384 MADDQ8WXG6 1647 aa20.11■□□□□ 0.81
ATL2-203ENST00000405384 ESF1Q9H501 851 aaKnown RBP20.1■□□□□ 0.81
ATL2-203ENST00000405384 KANK1Q14678 1352 aa20.1■□□□□ 0.81
ATL2-203ENST00000405384 PPP6R1Q9UPN7 881 aa20.09■□□□□ 0.81
ATL2-203ENST00000405384 FER1L4A9Z1Z3 1794 aa20.09■□□□□ 0.81
ATL2-203ENST00000405384 VWDEQ8N2E2 1590 aa20.08■□□□□ 0.81
ATL2-203ENST00000405384 ABCC3O15438 1527 aa20.08■□□□□ 0.8
ATL2-203ENST00000405384 KDM5DQ9BY66 1539 aa20.07■□□□□ 0.8
ATL2-203ENST00000405384 CLTCQ00610 1675 aaKnown RBP20.07■□□□□ 0.8
ATL2-203ENST00000405384 CEP152O94986 1710 aa20.07■□□□□ 0.8
ATL2-203ENST00000405384 RIMS1Q86UR5 1692 aaKnown RBP20.06■□□□□ 0.8
ATL2-203ENST00000405384 HRCP23327 699 aa20.05■□□□□ 0.8
ATL2-203ENST00000405384 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
ATL2-203ENST00000405384 FAM135AQ9P2D6 1515 aa20.04■□□□□ 0.8
ATL2-203ENST00000405384 IQGAP3Q86VI3 1631 aa20.04■□□□□ 0.8
ATL2-203ENST00000405384 CNTLNQ9NXG0 1405 aa20.04■□□□□ 0.8
ATL2-203ENST00000405384 CEBPAP49715 358 aaPredicted RBP20.03■□□□□ 0.8
ATL2-203ENST00000405384 ZMYM3Q14202 1370 aa20.03■□□□□ 0.8
ATL2-203ENST00000405384 PZPP20742 1482 aa20.03■□□□□ 0.8
ATL2-203ENST00000405384 LMTK2Q8IWU2 1503 aa20.02■□□□□ 0.8
ATL2-203ENST00000405384 ZC3H13Q5T200 1668 aaKnown RBP20.02■□□□□ 0.79
ATL2-203ENST00000405384 SLC4A1APQ9BWU0 796 aaKnown RBP20■□□□□ 0.79
ATL2-203ENST00000405384 CAMSAP1Q5T5Y3 1602 aa20■□□□□ 0.79
ATL2-203ENST00000405384 PTPRMP28827 1452 aa19.99■□□□□ 0.79
ATL2-203ENST00000405384 MPHOSPH9Q99550 1183 aa19.98■□□□□ 0.79
ATL2-203ENST00000405384 FBXO31Q5XUX0 539 aaPredicted RBP19.98■□□□□ 0.79
ATL2-203ENST00000405384 MROH2AA6NES4 1674 aa19.98■□□□□ 0.79
ATL2-203ENST00000405384 TET3O43151 1660 aa19.98■□□□□ 0.79
ATL2-203ENST00000405384 ACIN1Q9UKV3 1341 aaKnown RBP19.97■□□□□ 0.79
ATL2-203ENST00000405384 EFCAB6Q5THR3 1501 aa19.97■□□□□ 0.79
ATL2-203ENST00000405384 NPATQ14207 1427 aa19.97■□□□□ 0.79
ATL2-203ENST00000405384 PKD2Q13563 968 aa19.97■□□□□ 0.79
ATL2-203ENST00000405384 C3P01024 1663 aa19.97■□□□□ 0.79
ATL2-203ENST00000405384 FOXD1Q16676 465 aa19.96■□□□□ 0.79
ATL2-203ENST00000405384 ARHGAP31Q2M1Z3 1444 aa19.95■□□□□ 0.78
ATL2-203ENST00000405384 E9PCH4 1651 aa19.94■□□□□ 0.78
ATL2-203ENST00000405384 CFAP65Q6ZU64 1925 aaKnown RBP19.94■□□□□ 0.78
ATL2-203ENST00000405384 ERVK-7P63135 1459 aa19.9■□□□□ 0.78
ATL2-203ENST00000405384 RPRD2Q5VT52 1461 aaKnown RBP19.89■□□□□ 0.77
ATL2-203ENST00000405384 PREX1Q8TCU6 1659 aa19.87■□□□□ 0.77
ATL2-203ENST00000405384 DHX57Q6P158 1386 aaKnown RBP19.87■□□□□ 0.77
ATL2-203ENST00000405384 SPATA31D1Q6ZQQ2 1576 aa19.86■□□□□ 0.77
ATL2-203ENST00000405384 NOS1P29475 1434 aa19.86■□□□□ 0.77
ATL2-203ENST00000405384 TNRQ92752 1358 aa19.86■□□□□ 0.77
ATL2-203ENST00000405384 PLA2R1Q13018 1463 aa19.84■□□□□ 0.77
ATL2-203ENST00000405384 SYNMO15061 1565 aa19.84■□□□□ 0.77
ATL2-203ENST00000405384 PTPRTO14522 1441 aa19.83■□□□□ 0.77
ATL2-203ENST00000405384 UGGT1Q9NYU2 1555 aa19.82■□□□□ 0.76
ATL2-203ENST00000405384 SPHKAPQ2M3C7 1700 aa19.81■□□□□ 0.76
ATL2-203ENST00000405384 ANKRD30BQ9BXX2 1392 aa19.79■□□□□ 0.76
ATL2-203ENST00000405384 IDI1Q13907 227 aa19.79■□□□□ 0.76
ATL2-203ENST00000405384 TRPM2O94759 1503 aa19.78■□□□□ 0.76
ATL2-203ENST00000405384 SETD1BQ9UPS6 1966 aaKnown RBP19.78■□□□□ 0.76
ATL2-203ENST00000405384 MYO3AQ8NEV4 1616 aa19.76■□□□□ 0.75
ATL2-203ENST00000405384 SLC52A1Q9NWF4 448 aa19.76■□□□□ 0.75
ATL2-203ENST00000405384 CLTCL1P53675 1640 aa19.75■□□□□ 0.75
ATL2-203ENST00000405384 AEBP2Q6ZN18 517 aaPredicted RBP19.74■□□□□ 0.75
ATL2-203ENST00000405384 NLRP1Q9C000 1473 aa19.74■□□□□ 0.75
ATL2-203ENST00000405384 UHRF1BP1Q6BDS2 1440 aa19.74■□□□□ 0.75
ATL2-203ENST00000405384 PIK3C2BO00750 1634 aa19.74■□□□□ 0.75
ATL2-203ENST00000405384 CCDC144AA2RUR9 1427 aa19.73■□□□□ 0.75
ATL2-203ENST00000405384 CHGAP10645 457 aaKnown RBP19.72■□□□□ 0.75
ATL2-203ENST00000405384 A2ML1A8K2U0 1454 aa19.72■□□□□ 0.75
ATL2-203ENST00000405384 CEP170BQ9Y4F5 1589 aaPredicted RBP19.72■□□□□ 0.75
ATL2-203ENST00000405384 CCER1Q8TC90 406 aaPredicted RBP19.71■□□□□ 0.75
ATL2-203ENST00000405384 SIN3AQ96ST3 1273 aa19.71■□□□□ 0.75
ATL2-203ENST00000405384 STAG3Q9UJ98 1225 aa19.7■□□□□ 0.74
ATL2-203ENST00000405384 LMTK3Q96Q04 1460 aa19.68■□□□□ 0.74
ATL2-203ENST00000405384 ZNF142P52746 1687 aaPredicted RBP19.68■□□□□ 0.74
ATL2-203ENST00000405384 HSPA2P54652 639 aa19.67■□□□□ 0.74
ATL2-203ENST00000405384 ADGRB3O60242 1522 aa19.67■□□□□ 0.74
ATL2-203ENST00000405384 NEUROD1Q13562 356 aa19.66■□□□□ 0.74
ATL2-203ENST00000405384 UBR1Q8IWV7 1749 aa19.66■□□□□ 0.74
ATL2-203ENST00000405384 TMEM131LA2VDJ0 1609 aa19.66■□□□□ 0.74
ATL2-203ENST00000405384 MYO5BQ9ULV0 1848 aa19.65■□□□□ 0.74
ATL2-203ENST00000405384 RGL3Q3MIN7 710 aa19.64■□□□□ 0.74
ATL2-203ENST00000405384 THEMISQ8N1K5 641 aaPredicted RBP19.64■□□□□ 0.73
ATL2-203ENST00000405384 KIF1BO60333 1816 aa19.64■□□□□ 0.73
ATL2-203ENST00000405384 SPATA31E1Q6ZUB1 1445 aa19.63■□□□□ 0.73
ATL2-203ENST00000405384 ZNF326Q5BKZ1 582 aaKnown RBP19.63■□□□□ 0.73
ATL2-203ENST00000405384 KDM5AP29375 1690 aaKnown RBP19.6■□□□□ 0.73
ATL2-203ENST00000405384 NUTM2DQ5VT03 806 aaPredicted RBP19.6■□□□□ 0.73
ATL2-203ENST00000405384 TMEM2Q9UHN6 1383 aa19.59■□□□□ 0.73
ATL2-203ENST00000405384 CLSPNQ9HAW4 1339 aa19.59■□□□□ 0.73
ATL2-203ENST00000405384 RIMS2Q9UQ26 1411 aa19.57■□□□□ 0.72
ATL2-203ENST00000405384 LTKP29376 864 aa19.57■□□□□ 0.72
ATL2-203ENST00000405384 ARHGAP23Q9P227 1491 aa19.56■□□□□ 0.72
ATL2-203ENST00000405384 SLIT1O75093 1534 aa19.56■□□□□ 0.72
ATL2-203ENST00000405384 ZFYVE9O95405 1425 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms