RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 REREQ9P2R6 1566 aa32.74■■■□□ 2.83
EPCAM-202ENST00000405271 MADDQ8WXG6 1647 aa32.73■■■□□ 2.83
EPCAM-202ENST00000405271 ACIN1Q9UKV3 1341 aaKnown RBP32.72■■■□□ 2.83
EPCAM-202ENST00000405271 DEPDC5O75140 1603 aa32.71■■■□□ 2.83
EPCAM-202ENST00000405271 A2MP01023 1474 aa32.71■■■□□ 2.83
EPCAM-202ENST00000405271 DHX29Q7Z478 1369 aaKnown RBP32.66■■■□□ 2.82
EPCAM-202ENST00000405271 RNF17Q9BXT8 1623 aaKnown RBP32.66■■■□□ 2.82
EPCAM-202ENST00000405271 KDM5DQ9BY66 1539 aa32.64■■■□□ 2.82
EPCAM-202ENST00000405271 AGLP35573 1532 aa32.62■■■□□ 2.81
EPCAM-202ENST00000405271 RIMS1Q86UR5 1692 aaKnown RBP32.6■■■□□ 2.81
EPCAM-202ENST00000405271 IQGAP3Q86VI3 1631 aa32.6■■■□□ 2.81
EPCAM-202ENST00000405271 PLPPR3Q6T4P5 718 aa32.58■■■□□ 2.81
EPCAM-202ENST00000405271 PRDM15P57071 1507 aaPredicted RBP32.57■■■□□ 2.81
EPCAM-202ENST00000405271 MROH1Q8NDA8 1641 aa32.56■■■□□ 2.8
EPCAM-202ENST00000405271 DHX57Q6P158 1386 aaKnown RBP32.51■■■□□ 2.8
EPCAM-202ENST00000405271 FER1L4A9Z1Z3 1794 aa32.51■■■□□ 2.79
EPCAM-202ENST00000405271 CEBPAP49715 358 aaPredicted RBP32.5■■■□□ 2.79
EPCAM-202ENST00000405271 ZC3H13Q5T200 1668 aaKnown RBP32.5■■■□□ 2.79
EPCAM-202ENST00000405271 VWDEQ8N2E2 1590 aa32.49■■■□□ 2.79
EPCAM-202ENST00000405271 CEP152O94986 1710 aa32.49■■■□□ 2.79
EPCAM-202ENST00000405271 ESF1Q9H501 851 aaKnown RBP32.48■■■□□ 2.79
EPCAM-202ENST00000405271 PZPP20742 1482 aa32.48■■■□□ 2.79
EPCAM-202ENST00000405271 FAM135AQ9P2D6 1515 aa32.48■■■□□ 2.79
EPCAM-202ENST00000405271 TRIM52Q96A61 297 aa32.47■■■□□ 2.79
EPCAM-202ENST00000405271 TET3O43151 1660 aa32.46■■■□□ 2.79
EPCAM-202ENST00000405271 KIF3BO15066 747 aa32.44■■■□□ 2.78
EPCAM-202ENST00000405271 NUP155O75694 1391 aa32.43■■■□□ 2.78
EPCAM-202ENST00000405271 GGT6Q6P531 493 aa32.41■■■□□ 2.78
EPCAM-202ENST00000405271 KANK1Q14678 1352 aa32.38■■■□□ 2.77
EPCAM-202ENST00000405271 CCER1Q8TC90 406 aaPredicted RBP32.38■■■□□ 2.77
EPCAM-202ENST00000405271 LMTK3Q96Q04 1460 aa32.37■■■□□ 2.77
EPCAM-202ENST00000405271 LMTK2Q8IWU2 1503 aa32.36■■■□□ 2.77
EPCAM-202ENST00000405271 CNTLNQ9NXG0 1405 aa32.36■■■□□ 2.77
EPCAM-202ENST00000405271 E9PCH4 1651 aa32.36■■■□□ 2.77
EPCAM-202ENST00000405271 CAMSAP1Q5T5Y3 1602 aa32.35■■■□□ 2.77
EPCAM-202ENST00000405271 PPP6R1Q9UPN7 881 aa32.34■■■□□ 2.77
EPCAM-202ENST00000405271 MPHOSPH9Q99550 1183 aa32.33■■■□□ 2.77
EPCAM-202ENST00000405271 CLSPNQ9HAW4 1339 aa32.33■■■□□ 2.77
EPCAM-202ENST00000405271 ABCC3O15438 1527 aa32.32■■■□□ 2.76
EPCAM-202ENST00000405271 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.31■■■□□ 2.76
EPCAM-202ENST00000405271 EFCAB6Q5THR3 1501 aa32.31■■■□□ 2.76
EPCAM-202ENST00000405271 SLC4A1APQ9BWU0 796 aaKnown RBP32.31■■■□□ 2.76
EPCAM-202ENST00000405271 ZMYM3Q14202 1370 aa32.31■■■□□ 2.76
EPCAM-202ENST00000405271 CLTCQ00610 1675 aaKnown RBP32.29■■■□□ 2.76
EPCAM-202ENST00000405271 HSPA2P54652 639 aa32.28■■■□□ 2.76
EPCAM-202ENST00000405271 SPHKAPQ2M3C7 1700 aa32.28■■■□□ 2.76
EPCAM-202ENST00000405271 C3P01024 1663 aa32.24■■■□□ 2.75
EPCAM-202ENST00000405271 MROH2AA6NES4 1674 aa32.23■■■□□ 2.75
EPCAM-202ENST00000405271 CFAP65Q6ZU64 1925 aaKnown RBP32.2■■■□□ 2.74
EPCAM-202ENST00000405271 RPRD2Q5VT52 1461 aaKnown RBP32.19■■■□□ 2.74
EPCAM-202ENST00000405271 PKD2Q13563 968 aa32.18■■■□□ 2.74
EPCAM-202ENST00000405271 SETD1BQ9UPS6 1966 aaKnown RBP32.18■■■□□ 2.74
EPCAM-202ENST00000405271 WASHC2CQ9Y4E1 1318 aa32.17■■■□□ 2.74
EPCAM-202ENST00000405271 UHRF1BP1Q6BDS2 1440 aa32.17■■■□□ 2.74
EPCAM-202ENST00000405271 NPATQ14207 1427 aa32.15■■■□□ 2.74
EPCAM-202ENST00000405271 PREX1Q8TCU6 1659 aa32.13■■■□□ 2.73
EPCAM-202ENST00000405271 ARHGAP31Q2M1Z3 1444 aa32.12■■■□□ 2.73
EPCAM-202ENST00000405271 ANKRD30BQ9BXX2 1392 aa32.12■■■□□ 2.73
EPCAM-202ENST00000405271 TRPM2O94759 1503 aa32.11■■■□□ 2.73
EPCAM-202ENST00000405271 FOXD1Q16676 465 aa32.08■■■□□ 2.73
EPCAM-202ENST00000405271 FBXO31Q5XUX0 539 aaPredicted RBP32.05■■■□□ 2.72
EPCAM-202ENST00000405271 PTPRTO14522 1441 aa32.04■■■□□ 2.72
EPCAM-202ENST00000405271 KIF1BO60333 1816 aa32.03■■■□□ 2.72
EPCAM-202ENST00000405271 PLA2R1Q13018 1463 aa32.01■■■□□ 2.71
EPCAM-202ENST00000405271 CLTCL1P53675 1640 aa32.01■■■□□ 2.71
EPCAM-202ENST00000405271 ZEB1P37275 1124 aaPredicted RBP31.99■■■□□ 2.71
EPCAM-202ENST00000405271 PIK3C2BO00750 1634 aa31.99■■■□□ 2.71
EPCAM-202ENST00000405271 SYNMO15061 1565 aa31.97■■■□□ 2.71
EPCAM-202ENST00000405271 SPATA31D1Q6ZQQ2 1576 aa31.97■■■□□ 2.71
EPCAM-202ENST00000405271 CCDC144AA2RUR9 1427 aa31.96■■■□□ 2.71
EPCAM-202ENST00000405271 NOS1P29475 1434 aa31.96■■■□□ 2.71
EPCAM-202ENST00000405271 ERVK-7P63135 1459 aa31.94■■■□□ 2.7
EPCAM-202ENST00000405271 SIN3AQ96ST3 1273 aa31.93■■■□□ 2.7
EPCAM-202ENST00000405271 TNRQ92752 1358 aa31.92■■■□□ 2.7
EPCAM-202ENST00000405271 NEURL4Q96JN8 1562 aa31.91■■■□□ 2.7
EPCAM-202ENST00000405271 DMRT2Q9Y5R5 561 aa31.9■■■□□ 2.7
EPCAM-202ENST00000405271 UGGT1Q9NYU2 1555 aa31.88■■■□□ 2.69
EPCAM-202ENST00000405271 MYO3AQ8NEV4 1616 aa31.87■■■□□ 2.69
EPCAM-202ENST00000405271 NEUROD1Q13562 356 aa31.86■■■□□ 2.69
EPCAM-202ENST00000405271 STRCQ7RTU9 1775 aa31.85■■■□□ 2.69
EPCAM-202ENST00000405271 MYO5BQ9ULV0 1848 aa31.85■■■□□ 2.69
EPCAM-202ENST00000405271 CEP170BQ9Y4F5 1589 aaPredicted RBP31.84■■■□□ 2.69
EPCAM-202ENST00000405271 TIMELESSQ9UNS1 1208 aa31.84■■■□□ 2.69
EPCAM-202ENST00000405271 TONSLQ96HA7 1378 aa31.83■■■□□ 2.69
EPCAM-202ENST00000405271 A2ML1A8K2U0 1454 aa31.83■■■□□ 2.69
EPCAM-202ENST00000405271 KDM5AP29375 1690 aaKnown RBP31.8■■■□□ 2.68
EPCAM-202ENST00000405271 IFT172Q9UG01 1749 aa31.8■■■□□ 2.68
EPCAM-202ENST00000405271 ADGRB3O60242 1522 aa31.8■■■□□ 2.68
EPCAM-202ENST00000405271 ZNF142P52746 1687 aaPredicted RBP31.8■■■□□ 2.68
EPCAM-202ENST00000405271 NCKAP5LQ9HCH0 1330 aa31.79■■■□□ 2.68
EPCAM-202ENST00000405271 NLRP1Q9C000 1473 aa31.76■■■□□ 2.68
EPCAM-202ENST00000405271 SPATA31E1Q6ZUB1 1445 aa31.76■■■□□ 2.67
EPCAM-202ENST00000405271 TMEM131LA2VDJ0 1609 aa31.75■■■□□ 2.67
EPCAM-202ENST00000405271 PPLO60437 1756 aa31.73■■■□□ 2.67
EPCAM-202ENST00000405271 THEMISQ8N1K5 641 aaPredicted RBP31.73■■■□□ 2.67
EPCAM-202ENST00000405271 SLC52A1Q9NWF4 448 aa31.72■■■□□ 2.67
EPCAM-202ENST00000405271 ILDR1Q86SU0 546 aaPredicted RBP31.7■■■□□ 2.66
EPCAM-202ENST00000405271 UBR1Q8IWV7 1749 aa31.7■■■□□ 2.66
EPCAM-202ENST00000405271 ANKLE2Q86XL3 938 aa31.63■■■□□ 2.65
EPCAM-202ENST00000405271 L3MBTL2Q969R5 705 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms