RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.38■■□□□ 1.33
CDPF1-204ENST00000404744 AGLP35573 1532 aa23.38■■□□□ 1.33
CDPF1-204ENST00000404744 MLECQ14165 292 aa23.36■■□□□ 1.33
CDPF1-204ENST00000404744 KDM4FA0A1W2PPD8 638 aa23.35■■□□□ 1.33
CDPF1-204ENST00000404744 KANK1Q14678 1352 aa23.34■■□□□ 1.33
CDPF1-204ENST00000404744 BCORL1Q5H9F3 1711 aa23.32■■□□□ 1.32
CDPF1-204ENST00000404744 NUP155O75694 1391 aa23.31■■□□□ 1.32
CDPF1-204ENST00000404744 ESF1Q9H501 851 aaKnown RBP23.31■■□□□ 1.32
CDPF1-204ENST00000404744 SIGLEC1Q9BZZ2 1709 aa23.3■■□□□ 1.32
CDPF1-204ENST00000404744 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
CDPF1-204ENST00000404744 RNF17Q9BXT8 1623 aaKnown RBP23.28■■□□□ 1.32
CDPF1-204ENST00000404744 UNC13BO14795 1591 aa23.28■■□□□ 1.32
CDPF1-204ENST00000404744 WASHC2CQ9Y4E1 1318 aa23.27■■□□□ 1.32
CDPF1-204ENST00000404744 DEPDC5O75140 1603 aa23.26■■□□□ 1.31
CDPF1-204ENST00000404744 PRDM15P57071 1507 aaPredicted RBP23.24■■□□□ 1.31
CDPF1-204ENST00000404744 SLC4A1APQ9BWU0 796 aaKnown RBP23.23■■□□□ 1.31
CDPF1-204ENST00000404744 MROH1Q8NDA8 1641 aa23.22■■□□□ 1.31
CDPF1-204ENST00000404744 MPHOSPH9Q99550 1183 aa23.2■■□□□ 1.3
CDPF1-204ENST00000404744 KDM5DQ9BY66 1539 aa23.2■■□□□ 1.3
CDPF1-204ENST00000404744 FAM135AQ9P2D6 1515 aa23.19■■□□□ 1.3
CDPF1-204ENST00000404744 IQGAP3Q86VI3 1631 aa23.18■■□□□ 1.3
CDPF1-204ENST00000404744 VWDEQ8N2E2 1590 aa23.17■■□□□ 1.3
CDPF1-204ENST00000404744 CNTLNQ9NXG0 1405 aa23.16■■□□□ 1.3
CDPF1-204ENST00000404744 ZC3H13Q5T200 1668 aaKnown RBP23.16■■□□□ 1.3
CDPF1-204ENST00000404744 ABCC3O15438 1527 aa23.16■■□□□ 1.3
CDPF1-204ENST00000404744 PZPP20742 1482 aa23.16■■□□□ 1.3
CDPF1-204ENST00000404744 PKD2Q13563 968 aa23.15■■□□□ 1.3
CDPF1-204ENST00000404744 LMTK2Q8IWU2 1503 aa23.14■■□□□ 1.3
CDPF1-204ENST00000404744 CEP152O94986 1710 aa23.14■■□□□ 1.29
CDPF1-204ENST00000404744 CLTCQ00610 1675 aaKnown RBP23.13■■□□□ 1.29
CDPF1-204ENST00000404744 FER1L4A9Z1Z3 1794 aa23.11■■□□□ 1.29
CDPF1-204ENST00000404744 TET3O43151 1660 aa23.11■■□□□ 1.29
CDPF1-204ENST00000404744 ADAMTSL3P82987 1691 aa23.1■■□□□ 1.29
CDPF1-204ENST00000404744 ZMYM3Q14202 1370 aa23.1■■□□□ 1.29
CDPF1-204ENST00000404744 DHX57Q6P158 1386 aaKnown RBP23.1■■□□□ 1.29
CDPF1-204ENST00000404744 CAMSAP1Q5T5Y3 1602 aa23.08■■□□□ 1.29
CDPF1-204ENST00000404744 MADDQ8WXG6 1647 aa23.08■■□□□ 1.28
CDPF1-204ENST00000404744 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.28
CDPF1-204ENST00000404744 EFCAB6Q5THR3 1501 aa23.07■■□□□ 1.28
CDPF1-204ENST00000404744 FOXD1Q16676 465 aa23.07■■□□□ 1.28
CDPF1-204ENST00000404744 PLPPR3Q6T4P5 718 aa23.06■■□□□ 1.28
CDPF1-204ENST00000404744 ARHGAP31Q2M1Z3 1444 aa23.06■■□□□ 1.28
CDPF1-204ENST00000404744 MROH2AA6NES4 1674 aa23.04■■□□□ 1.28
CDPF1-204ENST00000404744 RIMS1Q86UR5 1692 aaKnown RBP23.04■■□□□ 1.28
CDPF1-204ENST00000404744 NPATQ14207 1427 aa23.04■■□□□ 1.28
CDPF1-204ENST00000404744 RPRD2Q5VT52 1461 aaKnown RBP23.04■■□□□ 1.28
CDPF1-204ENST00000404744 E9PCH4 1651 aa23.03■■□□□ 1.28
CDPF1-204ENST00000404744 CEBPAP49715 358 aaPredicted RBP23.02■■□□□ 1.28
CDPF1-204ENST00000404744 FBXO31Q5XUX0 539 aaPredicted RBP22.99■■□□□ 1.27
CDPF1-204ENST00000404744 C3P01024 1663 aa22.96■■□□□ 1.27
CDPF1-204ENST00000404744 CFAP65Q6ZU64 1925 aaKnown RBP22.95■■□□□ 1.26
CDPF1-204ENST00000404744 PTPRMP28827 1452 aa22.95■■□□□ 1.26
CDPF1-204ENST00000404744 ERVK-7P63135 1459 aa22.95■■□□□ 1.26
CDPF1-204ENST00000404744 ANKRD30BQ9BXX2 1392 aa22.94■■□□□ 1.26
CDPF1-204ENST00000404744 PTPRTO14522 1441 aa22.94■■□□□ 1.26
CDPF1-204ENST00000404744 PREX1Q8TCU6 1659 aa22.93■■□□□ 1.26
CDPF1-204ENST00000404744 CLSPNQ9HAW4 1339 aa22.93■■□□□ 1.26
CDPF1-204ENST00000404744 NOS1P29475 1434 aa22.93■■□□□ 1.26
CDPF1-204ENST00000404744 SPHKAPQ2M3C7 1700 aa22.92■■□□□ 1.26
CDPF1-204ENST00000404744 TNRQ92752 1358 aa22.92■■□□□ 1.26
CDPF1-204ENST00000404744 CCDC144AA2RUR9 1427 aa22.91■■□□□ 1.26
CDPF1-204ENST00000404744 SPATA31D1Q6ZQQ2 1576 aa22.91■■□□□ 1.26
CDPF1-204ENST00000404744 SLC52A1Q9NWF4 448 aa22.91■■□□□ 1.26
CDPF1-204ENST00000404744 PLA2R1Q13018 1463 aa22.9■■□□□ 1.26
CDPF1-204ENST00000404744 TRPM2O94759 1503 aa22.89■■□□□ 1.26
CDPF1-204ENST00000404744 NEUROD1Q13562 356 aa22.87■■□□□ 1.25
CDPF1-204ENST00000404744 CHGAP10645 457 aaKnown RBP22.86■■□□□ 1.25
CDPF1-204ENST00000404744 SIN3AQ96ST3 1273 aa22.86■■□□□ 1.25
CDPF1-204ENST00000404744 SYNMO15061 1565 aa22.86■■□□□ 1.25
CDPF1-204ENST00000404744 IDI1Q13907 227 aa22.85■■□□□ 1.25
CDPF1-204ENST00000404744 STAG3Q9UJ98 1225 aa22.85■■□□□ 1.25
CDPF1-204ENST00000404744 UGGT1Q9NYU2 1555 aa22.82■■□□□ 1.24
CDPF1-204ENST00000404744 CLTCL1P53675 1640 aa22.81■■□□□ 1.24
CDPF1-204ENST00000404744 NLRP1Q9C000 1473 aa22.8■■□□□ 1.24
CDPF1-204ENST00000404744 PIK3C2BO00750 1634 aa22.78■■□□□ 1.24
CDPF1-204ENST00000404744 SETD1BQ9UPS6 1966 aaKnown RBP22.77■■□□□ 1.24
CDPF1-204ENST00000404744 RGL3Q3MIN7 710 aa22.77■■□□□ 1.24
CDPF1-204ENST00000404744 ZNF326Q5BKZ1 582 aaKnown RBP22.77■■□□□ 1.24
CDPF1-204ENST00000404744 UHRF1BP1Q6BDS2 1440 aa22.76■■□□□ 1.23
CDPF1-204ENST00000404744 KIF1BO60333 1816 aa22.76■■□□□ 1.23
CDPF1-204ENST00000404744 MYO3AQ8NEV4 1616 aa22.75■■□□□ 1.23
CDPF1-204ENST00000404744 TONSLQ96HA7 1378 aa22.73■■□□□ 1.23
CDPF1-204ENST00000404744 A2ML1A8K2U0 1454 aa22.73■■□□□ 1.23
CDPF1-204ENST00000404744 THEMISQ8N1K5 641 aaPredicted RBP22.72■■□□□ 1.23
CDPF1-204ENST00000404744 ADGRB3O60242 1522 aa22.71■■□□□ 1.23
CDPF1-204ENST00000404744 CEP170BQ9Y4F5 1589 aaPredicted RBP22.69■■□□□ 1.22
CDPF1-204ENST00000404744 TIMELESSQ9UNS1 1208 aa22.69■■□□□ 1.22
CDPF1-204ENST00000404744 SPATA31E1Q6ZUB1 1445 aa22.69■■□□□ 1.22
CDPF1-204ENST00000404744 TMEM131LA2VDJ0 1609 aa22.68■■□□□ 1.22
CDPF1-204ENST00000404744 HDGFP51858 240 aaKnown RBP22.67■■□□□ 1.22
CDPF1-204ENST00000404744 RPGRIP1LQ68CZ1 1315 aa22.67■■□□□ 1.22
CDPF1-204ENST00000404744 NEURL4Q96JN8 1562 aa22.67■■□□□ 1.22
CDPF1-204ENST00000404744 DCAF11Q8TEB1 546 aa22.66■■□□□ 1.22
CDPF1-204ENST00000404744 L3MBTL2Q969R5 705 aa22.66■■□□□ 1.22
CDPF1-204ENST00000404744 KDM5AP29375 1690 aaKnown RBP22.66■■□□□ 1.22
CDPF1-204ENST00000404744 UBR1Q8IWV7 1749 aa22.65■■□□□ 1.22
CDPF1-204ENST00000404744 ZNF142P52746 1687 aaPredicted RBP22.65■■□□□ 1.22
CDPF1-204ENST00000404744 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.63■■□□□ 1.21
CDPF1-204ENST00000404744 KDM2AQ9Y2K7 1162 aa22.63■■□□□ 1.21
CDPF1-204ENST00000404744 STAC3Q96MF2 364 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms