RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 PTPRMP28827 1452 aa25.95■■□□□ 1.74
PTCHD3P3-201ENST00000403073 CEBPAP49715 358 aaPredicted RBP25.93■■□□□ 1.74
PTCHD3P3-201ENST00000403073 WASHC2CQ9Y4E1 1318 aa25.92■■□□□ 1.74
PTCHD3P3-201ENST00000403073 EIF2AK4Q9P2K8 1649 aaKnown RBP25.92■■□□□ 1.74
PTCHD3P3-201ENST00000403073 RIMS1Q86UR5 1692 aaKnown RBP25.91■■□□□ 1.74
PTCHD3P3-201ENST00000403073 FER1L4A9Z1Z3 1794 aa25.89■■□□□ 1.73
PTCHD3P3-201ENST00000403073 CNTLNQ9NXG0 1405 aa25.88■■□□□ 1.73
PTCHD3P3-201ENST00000403073 NAIPQ13075 1403 aa25.88■■□□□ 1.73
PTCHD3P3-201ENST00000403073 ZMYM3Q14202 1370 aa25.87■■□□□ 1.73
PTCHD3P3-201ENST00000403073 RNF17Q9BXT8 1623 aaKnown RBP25.86■■□□□ 1.73
PTCHD3P3-201ENST00000403073 MROH1Q8NDA8 1641 aa25.85■■□□□ 1.73
PTCHD3P3-201ENST00000403073 HFM1A2PYH4 1435 aa25.84■■□□□ 1.73
PTCHD3P3-201ENST00000403073 KANK1Q14678 1352 aa25.82■■□□□ 1.72
PTCHD3P3-201ENST00000403073 CLTCQ00610 1675 aaKnown RBP25.82■■□□□ 1.72
PTCHD3P3-201ENST00000403073 KDM5DQ9BY66 1539 aa25.82■■□□□ 1.72
PTCHD3P3-201ENST00000403073 ABCC3O15438 1527 aa25.79■■□□□ 1.72
PTCHD3P3-201ENST00000403073 PRDM15P57071 1507 aaPredicted RBP25.79■■□□□ 1.72
PTCHD3P3-201ENST00000403073 DEPDC5O75140 1603 aa25.78■■□□□ 1.72
PTCHD3P3-201ENST00000403073 FAM135AQ9P2D6 1515 aa25.77■■□□□ 1.72
PTCHD3P3-201ENST00000403073 FBXO31Q5XUX0 539 aaPredicted RBP25.76■■□□□ 1.71
PTCHD3P3-201ENST00000403073 NUP155O75694 1391 aa25.75■■□□□ 1.71
PTCHD3P3-201ENST00000403073 MROH2AA6NES4 1674 aa25.74■■□□□ 1.71
PTCHD3P3-201ENST00000403073 C3P01024 1663 aa25.74■■□□□ 1.71
PTCHD3P3-201ENST00000403073 GCC2Q8IWJ2 1684 aa25.73■■□□□ 1.71
PTCHD3P3-201ENST00000403073 VWDEQ8N2E2 1590 aa25.73■■□□□ 1.71
PTCHD3P3-201ENST00000403073 TRIM52Q96A61 297 aa25.72■■□□□ 1.71
PTCHD3P3-201ENST00000403073 SETD5Q9C0A6 1442 aa25.71■■□□□ 1.71
PTCHD3P3-201ENST00000403073 UNC13BO14795 1591 aa25.7■■□□□ 1.71
PTCHD3P3-201ENST00000403073 TRIM26Q12899 539 aaPredicted RBP25.7■■□□□ 1.7
PTCHD3P3-201ENST00000403073 ZC3H13Q5T200 1668 aaKnown RBP25.69■■□□□ 1.7
PTCHD3P3-201ENST00000403073 PZPP20742 1482 aa25.69■■□□□ 1.7
PTCHD3P3-201ENST00000403073 CEP152O94986 1710 aa25.68■■□□□ 1.7
PTCHD3P3-201ENST00000403073 LMTK2Q8IWU2 1503 aa25.68■■□□□ 1.7
PTCHD3P3-201ENST00000403073 NPATQ14207 1427 aa25.67■■□□□ 1.7
PTCHD3P3-201ENST00000403073 ARHGAP31Q2M1Z3 1444 aa25.65■■□□□ 1.7
PTCHD3P3-201ENST00000403073 CAMSAP1Q5T5Y3 1602 aa25.65■■□□□ 1.7
PTCHD3P3-201ENST00000403073 RAB3GAP2Q9H2M9 1393 aa25.64■■□□□ 1.69
PTCHD3P3-201ENST00000403073 TNRQ92752 1358 aa25.62■■□□□ 1.69
PTCHD3P3-201ENST00000403073 IQGAP3Q86VI3 1631 aa25.6■■□□□ 1.69
PTCHD3P3-201ENST00000403073 EFCAB6Q5THR3 1501 aa25.59■■□□□ 1.69
PTCHD3P3-201ENST00000403073 ERVK-7P63135 1459 aa25.59■■□□□ 1.69
PTCHD3P3-201ENST00000403073 UHRF1BP1Q6BDS2 1440 aa25.57■■□□□ 1.68
PTCHD3P3-201ENST00000403073 SLC4A1APQ9BWU0 796 aaKnown RBP25.57■■□□□ 1.68
PTCHD3P3-201ENST00000403073 TET3O43151 1660 aa25.56■■□□□ 1.68
PTCHD3P3-201ENST00000403073 LMTK3Q96Q04 1460 aa25.56■■□□□ 1.68
PTCHD3P3-201ENST00000403073 HSPA2P54652 639 aa25.56■■□□□ 1.68
PTCHD3P3-201ENST00000403073 SPATA31D1Q6ZQQ2 1576 aa25.55■■□□□ 1.68
PTCHD3P3-201ENST00000403073 PKD2Q13563 968 aa25.54■■□□□ 1.68
PTCHD3P3-201ENST00000403073 MPHOSPH9Q99550 1183 aa25.54■■□□□ 1.68
PTCHD3P3-201ENST00000403073 HRCP23327 699 aa25.53■■□□□ 1.68
PTCHD3P3-201ENST00000403073 ACIN1Q9UKV3 1341 aaKnown RBP25.53■■□□□ 1.68
PTCHD3P3-201ENST00000403073 RPRD2Q5VT52 1461 aaKnown RBP25.53■■□□□ 1.68
PTCHD3P3-201ENST00000403073 NOS1P29475 1434 aa25.51■■□□□ 1.67
PTCHD3P3-201ENST00000403073 PREX1Q8TCU6 1659 aa25.51■■□□□ 1.67
PTCHD3P3-201ENST00000403073 E9PCH4 1651 aa25.48■■□□□ 1.67
PTCHD3P3-201ENST00000403073 IDI1Q13907 227 aa25.48■■□□□ 1.67
PTCHD3P3-201ENST00000403073 FOXD1Q16676 465 aa25.48■■□□□ 1.67
PTCHD3P3-201ENST00000403073 MYO3AQ8NEV4 1616 aa25.48■■□□□ 1.67
PTCHD3P3-201ENST00000403073 SETD1BQ9UPS6 1966 aaKnown RBP25.47■■□□□ 1.67
PTCHD3P3-201ENST00000403073 NLRP1Q9C000 1473 aa25.47■■□□□ 1.67
PTCHD3P3-201ENST00000403073 A2ML1A8K2U0 1454 aa25.46■■□□□ 1.67
PTCHD3P3-201ENST00000403073 CFAP65Q6ZU64 1925 aaKnown RBP25.45■■□□□ 1.66
PTCHD3P3-201ENST00000403073 SYNMO15061 1565 aa25.44■■□□□ 1.66
PTCHD3P3-201ENST00000403073 SLC52A1Q9NWF4 448 aa25.44■■□□□ 1.66
PTCHD3P3-201ENST00000403073 CEP170BQ9Y4F5 1589 aaPredicted RBP25.44■■□□□ 1.66
PTCHD3P3-201ENST00000403073 PTPRTO14522 1441 aa25.41■■□□□ 1.66
PTCHD3P3-201ENST00000403073 PCGF6Q9BYE7 350 aa25.41■■□□□ 1.66
PTCHD3P3-201ENST00000403073 THEMISQ8N1K5 641 aaPredicted RBP25.4■■□□□ 1.66
PTCHD3P3-201ENST00000403073 STAG3Q9UJ98 1225 aa25.4■■□□□ 1.66
PTCHD3P3-201ENST00000403073 PLA2R1Q13018 1463 aa25.38■■□□□ 1.65
PTCHD3P3-201ENST00000403073 UGGT1Q9NYU2 1555 aa25.38■■□□□ 1.65
PTCHD3P3-201ENST00000403073 ZNF142P52746 1687 aaPredicted RBP25.36■■□□□ 1.65
PTCHD3P3-201ENST00000403073 CHGAP10645 457 aaKnown RBP25.36■■□□□ 1.65
PTCHD3P3-201ENST00000403073 NCKAP5LQ9HCH0 1330 aa25.34■■□□□ 1.65
PTCHD3P3-201ENST00000403073 PIK3C2BO00750 1634 aa25.34■■□□□ 1.65
PTCHD3P3-201ENST00000403073 TRPM2O94759 1503 aa25.3■■□□□ 1.64
PTCHD3P3-201ENST00000403073 SPHKAPQ2M3C7 1700 aa25.29■■□□□ 1.64
PTCHD3P3-201ENST00000403073 ANKLE2Q86XL3 938 aa25.28■■□□□ 1.64
PTCHD3P3-201ENST00000403073 UBR1Q8IWV7 1749 aa25.28■■□□□ 1.64
PTCHD3P3-201ENST00000403073 TMEM2Q9UHN6 1383 aa25.26■■□□□ 1.63
PTCHD3P3-201ENST00000403073 ADGRB3O60242 1522 aa25.26■■□□□ 1.63
PTCHD3P3-201ENST00000403073 TXNDC2Q86VQ3 553 aa25.25■■□□□ 1.63
PTCHD3P3-201ENST00000403073 CLTCL1P53675 1640 aa25.24■■□□□ 1.63
PTCHD3P3-201ENST00000403073 LTKP29376 864 aa25.24■■□□□ 1.63
PTCHD3P3-201ENST00000403073 ANKRD30BQ9BXX2 1392 aa25.23■■□□□ 1.63
PTCHD3P3-201ENST00000403073 TMEM131LA2VDJ0 1609 aa25.23■■□□□ 1.63
PTCHD3P3-201ENST00000403073 CCDC144AA2RUR9 1427 aa25.22■■□□□ 1.63
PTCHD3P3-201ENST00000403073 EID1Q9Y6B2 187 aa25.22■■□□□ 1.63
PTCHD3P3-201ENST00000403073 ARHGAP23Q9P227 1491 aa25.21■■□□□ 1.63
PTCHD3P3-201ENST00000403073 ZNF326Q5BKZ1 582 aaKnown RBP25.21■■□□□ 1.63
PTCHD3P3-201ENST00000403073 DMRT2Q9Y5R5 561 aa25.21■■□□□ 1.63
PTCHD3P3-201ENST00000403073 STRCQ7RTU9 1775 aa25.21■■□□□ 1.63
PTCHD3P3-201ENST00000403073 NUTM2DQ5VT03 806 aaPredicted RBP25.2■■□□□ 1.62
PTCHD3P3-201ENST00000403073 SLIT1O75093 1534 aa25.2■■□□□ 1.62
PTCHD3P3-201ENST00000403073 KDM5AP29375 1690 aaKnown RBP25.19■■□□□ 1.62
PTCHD3P3-201ENST00000403073 RIMS2Q9UQ26 1411 aa25.18■■□□□ 1.62
PTCHD3P3-201ENST00000403073 DHX57Q6P158 1386 aaKnown RBP25.18■■□□□ 1.62
PTCHD3P3-201ENST00000403073 HDGFP51858 240 aaKnown RBP25.16■■□□□ 1.62
PTCHD3P3-201ENST00000403073 RGL3Q3MIN7 710 aa25.16■■□□□ 1.62
PTCHD3P3-201ENST00000403073 SCAF11Q99590 1463 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms