RNA–Protein interactions for RNA: ENST00000402550.5

CGREF1-204, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 2 BASIC

Gene CGREF1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-204ENST00000402550 PPP6R1Q9UPN7 881 aa40.15■■■■■ 4.02
CGREF1-204ENST00000402550 RNF17Q9BXT8 1623 aaKnown RBP40.12■■■■■ 4.01
CGREF1-204ENST00000402550 MADDQ8WXG6 1647 aa40.1■■■■■ 4.01
CGREF1-204ENST00000402550 ESF1Q9H501 851 aaKnown RBP40.09■■■■■ 4.01
CGREF1-204ENST00000402550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.08■■■■■ 4.01
CGREF1-204ENST00000402550 SETD5Q9C0A6 1442 aa40.08■■■■■ 4.01
CGREF1-204ENST00000402550 MROH1Q8NDA8 1641 aa40.06■■■■■ 4
CGREF1-204ENST00000402550 FER1L4A9Z1Z3 1794 aa40.06■■■■■ 4
CGREF1-204ENST00000402550 DEPDC5O75140 1603 aa40.05■■■■■ 4
CGREF1-204ENST00000402550 WASHC2CQ9Y4E1 1318 aa40.04■■■■■ 4
CGREF1-204ENST00000402550 PRDM15P57071 1507 aaPredicted RBP40■■■■□ 3.99
CGREF1-204ENST00000402550 RIMS1Q86UR5 1692 aaKnown RBP39.99■■■■□ 3.99
CGREF1-204ENST00000402550 CNTLNQ9NXG0 1405 aa39.98■■■■□ 3.99
CGREF1-204ENST00000402550 KANK1Q14678 1352 aa39.96■■■■□ 3.99
CGREF1-204ENST00000402550 CLTCQ00610 1675 aaKnown RBP39.95■■■■□ 3.99
CGREF1-204ENST00000402550 RAB3GAP2Q9H2M9 1393 aa39.95■■■■□ 3.99
CGREF1-204ENST00000402550 KDM5DQ9BY66 1539 aa39.95■■■■□ 3.99
CGREF1-204ENST00000402550 FAM135AQ9P2D6 1515 aa39.95■■■■□ 3.99
CGREF1-204ENST00000402550 PTPRMP28827 1452 aa39.94■■■■□ 3.98
CGREF1-204ENST00000402550 UNC13BO14795 1591 aa39.94■■■■□ 3.98
CGREF1-204ENST00000402550 ZMYM3Q14202 1370 aa39.92■■■■□ 3.98
CGREF1-204ENST00000402550 VWDEQ8N2E2 1590 aa39.91■■■■□ 3.98
CGREF1-204ENST00000402550 ABCC3O15438 1527 aa39.91■■■■□ 3.98
CGREF1-204ENST00000402550 NUP155O75694 1391 aa39.9■■■■□ 3.98
CGREF1-204ENST00000402550 CEBPAP49715 358 aaPredicted RBP39.89■■■■□ 3.98
CGREF1-204ENST00000402550 ACIN1Q9UKV3 1341 aaKnown RBP39.88■■■■□ 3.98
CGREF1-204ENST00000402550 MROH2AA6NES4 1674 aa39.87■■■■□ 3.97
CGREF1-204ENST00000402550 ZC3H13Q5T200 1668 aaKnown RBP39.87■■■■□ 3.97
CGREF1-204ENST00000402550 CEP152O94986 1710 aa39.86■■■■□ 3.97
CGREF1-204ENST00000402550 HRCP23327 699 aa39.86■■■■□ 3.97
CGREF1-204ENST00000402550 PLPPR3Q6T4P5 718 aa39.84■■■■□ 3.97
CGREF1-204ENST00000402550 TRIM52Q96A61 297 aa39.84■■■■□ 3.97
CGREF1-204ENST00000402550 LMTK2Q8IWU2 1503 aa39.82■■■■□ 3.96
CGREF1-204ENST00000402550 C3P01024 1663 aa39.81■■■■□ 3.96
CGREF1-204ENST00000402550 IQGAP3Q86VI3 1631 aa39.79■■■■□ 3.96
CGREF1-204ENST00000402550 CAMSAP1Q5T5Y3 1602 aa39.76■■■■□ 3.96
CGREF1-204ENST00000402550 ARHGAP31Q2M1Z3 1444 aa39.73■■■■□ 3.95
CGREF1-204ENST00000402550 FBXO31Q5XUX0 539 aaPredicted RBP39.72■■■■□ 3.95
CGREF1-204ENST00000402550 PZPP20742 1482 aa39.72■■■■□ 3.95
CGREF1-204ENST00000402550 TET3O43151 1660 aa39.7■■■■□ 3.95
CGREF1-204ENST00000402550 NPATQ14207 1427 aa39.69■■■■□ 3.94
CGREF1-204ENST00000402550 EFCAB6Q5THR3 1501 aa39.68■■■■□ 3.94
CGREF1-204ENST00000402550 AEBP2Q6ZN18 517 aaPredicted RBP39.67■■■■□ 3.94
CGREF1-204ENST00000402550 CFAP65Q6ZU64 1925 aaKnown RBP39.66■■■■□ 3.94
CGREF1-204ENST00000402550 SLC4A1APQ9BWU0 796 aaKnown RBP39.66■■■■□ 3.94
CGREF1-204ENST00000402550 SETD1BQ9UPS6 1966 aaKnown RBP39.62■■■■□ 3.93
CGREF1-204ENST00000402550 MPHOSPH9Q99550 1183 aa39.62■■■■□ 3.93
CGREF1-204ENST00000402550 RPRD2Q5VT52 1461 aaKnown RBP39.6■■■■□ 3.93
CGREF1-204ENST00000402550 E9PCH4 1651 aa39.59■■■■□ 3.93
CGREF1-204ENST00000402550 PKD2Q13563 968 aa39.58■■■■□ 3.93
CGREF1-204ENST00000402550 ERVK-7P63135 1459 aa39.56■■■■□ 3.92
CGREF1-204ENST00000402550 SPATA31D1Q6ZQQ2 1576 aa39.54■■■■□ 3.92
CGREF1-204ENST00000402550 PREX1Q8TCU6 1659 aa39.54■■■■□ 3.92
CGREF1-204ENST00000402550 TNRQ92752 1358 aa39.52■■■■□ 3.92
CGREF1-204ENST00000402550 NOS1P29475 1434 aa39.5■■■■□ 3.91
CGREF1-204ENST00000402550 FOXD1Q16676 465 aa39.46■■■■□ 3.91
CGREF1-204ENST00000402550 DHX57Q6P158 1386 aaKnown RBP39.42■■■■□ 3.9
CGREF1-204ENST00000402550 UHRF1BP1Q6BDS2 1440 aa39.41■■■■□ 3.9
CGREF1-204ENST00000402550 SYNMO15061 1565 aa39.4■■■■□ 3.9
CGREF1-204ENST00000402550 PTPRTO14522 1441 aa39.4■■■■□ 3.9
CGREF1-204ENST00000402550 IDI1Q13907 227 aa39.38■■■■□ 3.89
CGREF1-204ENST00000402550 SLC52A1Q9NWF4 448 aa39.38■■■■□ 3.89
CGREF1-204ENST00000402550 MYO3AQ8NEV4 1616 aa39.37■■■■□ 3.89
CGREF1-204ENST00000402550 NLRP1Q9C000 1473 aa39.37■■■■□ 3.89
CGREF1-204ENST00000402550 SPHKAPQ2M3C7 1700 aa39.35■■■■□ 3.89
CGREF1-204ENST00000402550 PLA2R1Q13018 1463 aa39.35■■■■□ 3.89
CGREF1-204ENST00000402550 LMTK3Q96Q04 1460 aa39.33■■■■□ 3.89
CGREF1-204ENST00000402550 CCER1Q8TC90 406 aaPredicted RBP39.33■■■■□ 3.89
CGREF1-204ENST00000402550 A2ML1A8K2U0 1454 aa39.31■■■■□ 3.88
CGREF1-204ENST00000402550 CEP170BQ9Y4F5 1589 aaPredicted RBP39.29■■■■□ 3.88
CGREF1-204ENST00000402550 UGGT1Q9NYU2 1555 aa39.28■■■■□ 3.88
CGREF1-204ENST00000402550 TRPM2O94759 1503 aa39.27■■■■□ 3.88
CGREF1-204ENST00000402550 ZNF142P52746 1687 aaPredicted RBP39.26■■■■□ 3.88
CGREF1-204ENST00000402550 PIK3C2BO00750 1634 aa39.26■■■■□ 3.88
CGREF1-204ENST00000402550 HSPA2P54652 639 aa39.24■■■■□ 3.87
CGREF1-204ENST00000402550 ANKRD30BQ9BXX2 1392 aa39.21■■■■□ 3.87
CGREF1-204ENST00000402550 STAG3Q9UJ98 1225 aa39.21■■■■□ 3.87
CGREF1-204ENST00000402550 THEMISQ8N1K5 641 aaPredicted RBP39.2■■■■□ 3.87
CGREF1-204ENST00000402550 CLTCL1P53675 1640 aa39.17■■■■□ 3.86
CGREF1-204ENST00000402550 CLSPNQ9HAW4 1339 aa39.17■■■■□ 3.86
CGREF1-204ENST00000402550 UBR1Q8IWV7 1749 aa39.16■■■■□ 3.86
CGREF1-204ENST00000402550 CCDC144AA2RUR9 1427 aa39.15■■■■□ 3.86
CGREF1-204ENST00000402550 CHGAP10645 457 aaKnown RBP39.14■■■■□ 3.86
CGREF1-204ENST00000402550 KDM5AP29375 1690 aaKnown RBP39.12■■■■□ 3.85
CGREF1-204ENST00000402550 TMEM131LA2VDJ0 1609 aa39.11■■■■□ 3.85
CGREF1-204ENST00000402550 ADGRB3O60242 1522 aa39.1■■■■□ 3.85
CGREF1-204ENST00000402550 MYO5BQ9ULV0 1848 aa39.05■■■■□ 3.84
CGREF1-204ENST00000402550 KIF1BO60333 1816 aa39.05■■■■□ 3.84
CGREF1-204ENST00000402550 TMEM2Q9UHN6 1383 aa39.02■■■■□ 3.84
CGREF1-204ENST00000402550 SLIT1O75093 1534 aa38.98■■■■□ 3.83
CGREF1-204ENST00000402550 ANKLE2Q86XL3 938 aa38.98■■■■□ 3.83
CGREF1-204ENST00000402550 ARHGAP23Q9P227 1491 aa38.98■■■■□ 3.83
CGREF1-204ENST00000402550 ZNF326Q5BKZ1 582 aaKnown RBP38.96■■■■□ 3.83
CGREF1-204ENST00000402550 SPATA31E1Q6ZUB1 1445 aa38.95■■■■□ 3.83
CGREF1-204ENST00000402550 NCKAP5LQ9HCH0 1330 aa38.95■■■■□ 3.83
CGREF1-204ENST00000402550 LTKP29376 864 aa38.95■■■■□ 3.83
CGREF1-204ENST00000402550 TXNDC2Q86VQ3 553 aa38.95■■■■□ 3.83
CGREF1-204ENST00000402550 STRCQ7RTU9 1775 aa38.93■■■■□ 3.82
CGREF1-204ENST00000402550 RGL3Q3MIN7 710 aa38.93■■■■□ 3.82
CGREF1-204ENST00000402550 SIN3AQ96ST3 1273 aa38.93■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms