RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 ATP10AO60312 1499 aa13.24□□□□□ -0.29
BRCC3-206ENST00000399042 DHX29Q7Z478 1369 aaKnown RBP13.24□□□□□ -0.29
BRCC3-206ENST00000399042 GGT6Q6P531 493 aa13.24□□□□□ -0.29
BRCC3-206ENST00000399042 RICTORQ6R327 1708 aa13.24□□□□□ -0.29
BRCC3-206ENST00000399042 SETD5Q9C0A6 1442 aa13.23□□□□□ -0.29
BRCC3-206ENST00000399042 ANKRD50Q9ULJ7 1429 aa13.23□□□□□ -0.29
BRCC3-206ENST00000399042 FRMPD1Q5SYB0 1578 aa13.23□□□□□ -0.29
BRCC3-206ENST00000399042 MAST1Q9Y2H9 1570 aa13.23□□□□□ -0.29
BRCC3-206ENST00000399042 ZMYM4Q5VZL5 1548 aa13.23□□□□□ -0.29
BRCC3-206ENST00000399042 ADGRL2O95490 1459 aa13.23□□□□□ -0.29
BRCC3-206ENST00000399042 A2MP01023 1474 aa13.23□□□□□ -0.29
BRCC3-206ENST00000399042 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
BRCC3-206ENST00000399042 CROCC2H7BZ55 1655 aa13.21□□□□□ -0.29
BRCC3-206ENST00000399042 DUOX2Q9NRD8 1548 aa13.21□□□□□ -0.29
BRCC3-206ENST00000399042 NAIPQ13075 1403 aa13.21□□□□□ -0.3
BRCC3-206ENST00000399042 INO80Q9ULG1 1556 aaPredicted RBP13.2□□□□□ -0.3
BRCC3-206ENST00000399042 KANK1Q14678 1352 aa13.2□□□□□ -0.3
BRCC3-206ENST00000399042 ACIN1Q9UKV3 1341 aaKnown RBP13.19□□□□□ -0.3
BRCC3-206ENST00000399042 ADGBQ8N7X0 1667 aa13.19□□□□□ -0.3
BRCC3-206ENST00000399042 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
BRCC3-206ENST00000399042 ERBINQ96RT1 1412 aa13.19□□□□□ -0.3
BRCC3-206ENST00000399042 KIDINS220Q9ULH0 1771 aa13.19□□□□□ -0.3
BRCC3-206ENST00000399042 RAB3GAP2Q9H2M9 1393 aa13.19□□□□□ -0.3
BRCC3-206ENST00000399042 PLXNC1O60486 1568 aa13.18□□□□□ -0.3
BRCC3-206ENST00000399042 ARHGEF40Q8TER5 1519 aa13.18□□□□□ -0.3
BRCC3-206ENST00000399042 WASHC2CQ9Y4E1 1318 aa13.17□□□□□ -0.3
BRCC3-206ENST00000399042 DIP2CQ9Y2E4 1556 aa13.17□□□□□ -0.3
BRCC3-206ENST00000399042 NUP155O75694 1391 aa13.17□□□□□ -0.3
BRCC3-206ENST00000399042 ABCA6Q8N139 1617 aa13.17□□□□□ -0.3
BRCC3-206ENST00000399042 HRCP23327 699 aa13.14□□□□□ -0.31
BRCC3-206ENST00000399042 MYCNP04198 464 aaPredicted RBP13.13□□□□□ -0.31
BRCC3-206ENST00000399042 GCC2Q8IWJ2 1684 aa13.09□□□□□ -0.31
BRCC3-206ENST00000399042 CCER1Q8TC90 406 aaPredicted RBP13.09□□□□□ -0.31
BRCC3-206ENST00000399042 MPHOSPH9Q99550 1183 aa13.09□□□□□ -0.31
BRCC3-206ENST00000399042 REREQ9P2R6 1566 aa13.09□□□□□ -0.31
BRCC3-206ENST00000399042 AGLP35573 1532 aa13.08□□□□□ -0.31
BRCC3-206ENST00000399042 PKD2Q13563 968 aa13.08□□□□□ -0.32
BRCC3-206ENST00000399042 EIF2AK4Q9P2K8 1649 aaKnown RBP13.06□□□□□ -0.32
BRCC3-206ENST00000399042 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
BRCC3-206ENST00000399042 CNTLNQ9NXG0 1405 aa13.03□□□□□ -0.32
BRCC3-206ENST00000399042 FAM135AQ9P2D6 1515 aa13.02□□□□□ -0.33
BRCC3-206ENST00000399042 CEBPAP49715 358 aaPredicted RBP13.01□□□□□ -0.33
BRCC3-206ENST00000399042 ZMYM3Q14202 1370 aa13.01□□□□□ -0.33
BRCC3-206ENST00000399042 KDM5DQ9BY66 1539 aa13.01□□□□□ -0.33
BRCC3-206ENST00000399042 RNF17Q9BXT8 1623 aaKnown RBP13.01□□□□□ -0.33
BRCC3-206ENST00000399042 UNC13BO14795 1591 aa13□□□□□ -0.33
BRCC3-206ENST00000399042 PRDM15P57071 1507 aaPredicted RBP13□□□□□ -0.33
BRCC3-206ENST00000399042 ABCC3O15438 1527 aa12.99□□□□□ -0.33
BRCC3-206ENST00000399042 SAMD1Q6SPF0 538 aaPredicted RBP12.99□□□□□ -0.33
BRCC3-206ENST00000399042 STAG3Q9UJ98 1225 aa12.99□□□□□ -0.33
BRCC3-206ENST00000399042 PZPP20742 1482 aa12.98□□□□□ -0.33
BRCC3-206ENST00000399042 DHX57Q6P158 1386 aaKnown RBP12.98□□□□□ -0.33
BRCC3-206ENST00000399042 CHGAP10645 457 aaKnown RBP12.98□□□□□ -0.33
BRCC3-206ENST00000399042 NEUROD1Q13562 356 aa12.98□□□□□ -0.33
BRCC3-206ENST00000399042 FBXO31Q5XUX0 539 aaPredicted RBP12.98□□□□□ -0.33
BRCC3-206ENST00000399042 SIGLEC1Q9BZZ2 1709 aa12.98□□□□□ -0.33
BRCC3-206ENST00000399042 BCORL1Q5H9F3 1711 aa12.97□□□□□ -0.33
BRCC3-206ENST00000399042 DEPDC5O75140 1603 aa12.97□□□□□ -0.33
BRCC3-206ENST00000399042 IQGAP3Q86VI3 1631 aa12.96□□□□□ -0.33
BRCC3-206ENST00000399042 MROH1Q8NDA8 1641 aa12.95□□□□□ -0.34
BRCC3-206ENST00000399042 KDM4FA0A1W2PPD8 638 aa12.95□□□□□ -0.34
BRCC3-206ENST00000399042 CLTCQ00610 1675 aaKnown RBP12.95□□□□□ -0.34
BRCC3-206ENST00000399042 LMTK2Q8IWU2 1503 aa12.94□□□□□ -0.34
BRCC3-206ENST00000399042 NPATQ14207 1427 aa12.94□□□□□ -0.34
BRCC3-206ENST00000399042 VWDEQ8N2E2 1590 aa12.94□□□□□ -0.34
BRCC3-206ENST00000399042 ZC3H13Q5T200 1668 aaKnown RBP12.93□□□□□ -0.34
BRCC3-206ENST00000399042 MADDQ8WXG6 1647 aa12.93□□□□□ -0.34
BRCC3-206ENST00000399042 FER1L4A9Z1Z3 1794 aa12.93□□□□□ -0.34
BRCC3-206ENST00000399042 ARHGAP31Q2M1Z3 1444 aa12.93□□□□□ -0.34
BRCC3-206ENST00000399042 CEP152O94986 1710 aa12.93□□□□□ -0.34
BRCC3-206ENST00000399042 EFCAB6Q5THR3 1501 aa12.93□□□□□ -0.34
BRCC3-206ENST00000399042 TET3O43151 1660 aa12.93□□□□□ -0.34
BRCC3-206ENST00000399042 RPRD2Q5VT52 1461 aaKnown RBP12.92□□□□□ -0.34
BRCC3-206ENST00000399042 CCDC144AA2RUR9 1427 aa12.92□□□□□ -0.34
BRCC3-206ENST00000399042 ZNF326Q5BKZ1 582 aaKnown RBP12.92□□□□□ -0.34
BRCC3-206ENST00000399042 SPINK5Q9NQ38 1064 aaPredicted RBP12.92□□□□□ -0.34
BRCC3-206ENST00000399042 SLC52A1Q9NWF4 448 aa12.92□□□□□ -0.34
BRCC3-206ENST00000399042 RIMS1Q86UR5 1692 aaKnown RBP12.92□□□□□ -0.34
BRCC3-206ENST00000399042 TNRQ92752 1358 aa12.92□□□□□ -0.34
BRCC3-206ENST00000399042 CAMSAP1Q5T5Y3 1602 aa12.91□□□□□ -0.34
BRCC3-206ENST00000399042 SIN3AQ96ST3 1273 aa12.91□□□□□ -0.34
BRCC3-206ENST00000399042 PTPRMP28827 1452 aa12.91□□□□□ -0.34
BRCC3-206ENST00000399042 RGL3Q3MIN7 710 aa12.9□□□□□ -0.34
BRCC3-206ENST00000399042 ADAMTSL3P82987 1691 aa12.89□□□□□ -0.35
BRCC3-206ENST00000399042 CLSPNQ9HAW4 1339 aa12.89□□□□□ -0.35
BRCC3-206ENST00000399042 ANKRD30BQ9BXX2 1392 aa12.89□□□□□ -0.35
BRCC3-206ENST00000399042 ERVK-7P63135 1459 aa12.89□□□□□ -0.35
BRCC3-206ENST00000399042 IDI1Q13907 227 aa12.88□□□□□ -0.35
BRCC3-206ENST00000399042 E9PCH4 1651 aa12.86□□□□□ -0.35
BRCC3-206ENST00000399042 TONSLQ96HA7 1378 aa12.86□□□□□ -0.35
BRCC3-206ENST00000399042 PTPRTO14522 1441 aa12.86□□□□□ -0.35
BRCC3-206ENST00000399042 NOS1P29475 1434 aa12.86□□□□□ -0.35
BRCC3-206ENST00000399042 MROH2AA6NES4 1674 aa12.86□□□□□ -0.35
BRCC3-206ENST00000399042 CFAP65Q6ZU64 1925 aaKnown RBP12.86□□□□□ -0.35
BRCC3-206ENST00000399042 HDGFP51858 240 aaKnown RBP12.85□□□□□ -0.35
BRCC3-206ENST00000399042 THEMISQ8N1K5 641 aaPredicted RBP12.85□□□□□ -0.35
BRCC3-206ENST00000399042 BCANQ96GW7 911 aa12.85□□□□□ -0.35
BRCC3-206ENST00000399042 PPP1R15AO75807 674 aaPredicted RBP12.84□□□□□ -0.35
BRCC3-206ENST00000399042 C3P01024 1663 aa12.83□□□□□ -0.35
BRCC3-206ENST00000399042 UHRF1BP1Q6BDS2 1440 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms