RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 RSPH4AQ5TD94 716 aa13.9□□□□□ -0.18
HMGCLL1-205ENST00000398661 DIP2BQ9P265 1576 aa13.89□□□□□ -0.19
HMGCLL1-205ENST00000398661 PPP4R2Q9NY27 417 aa13.89□□□□□ -0.19
HMGCLL1-205ENST00000398661 GCC2Q8IWJ2 1684 aa13.88□□□□□ -0.19
HMGCLL1-205ENST00000398661 MLECQ14165 292 aa13.88□□□□□ -0.19
HMGCLL1-205ENST00000398661 SENP3Q9H4L4 574 aaPredicted RBP13.88□□□□□ -0.19
HMGCLL1-205ENST00000398661 COL17A1Q9UMD9 1497 aaPredicted RBP13.88□□□□□ -0.19
HMGCLL1-205ENST00000398661 ARHGEF5Q12774 1597 aa13.88□□□□□ -0.19
HMGCLL1-205ENST00000398661 ADGRL2O95490 1459 aa13.88□□□□□ -0.19
HMGCLL1-205ENST00000398661 YEATS2Q9ULM3 1422 aa13.87□□□□□ -0.19
HMGCLL1-205ENST00000398661 PZPP20742 1482 aa13.86□□□□□ -0.19
HMGCLL1-205ENST00000398661 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
HMGCLL1-205ENST00000398661 ZNF326Q5BKZ1 582 aaKnown RBP13.85□□□□□ -0.19
HMGCLL1-205ENST00000398661 SHANK2Q9UPX8 1470 aa13.85□□□□□ -0.19
HMGCLL1-205ENST00000398661 ADGBQ8N7X0 1667 aa13.84□□□□□ -0.19
HMGCLL1-205ENST00000398661 ZFYVE16Q7Z3T8 1539 aa13.84□□□□□ -0.19
HMGCLL1-205ENST00000398661 HNRNPUQ00839 825 aaKnown RBP eCLIP13.84□□□□□ -0.19
HMGCLL1-205ENST00000398661 RGL3Q3MIN7 710 aa13.84□□□□□ -0.19
HMGCLL1-205ENST00000398661 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
HMGCLL1-205ENST00000398661 POGZQ7Z3K3 1410 aa13.83□□□□□ -0.19
HMGCLL1-205ENST00000398661 MAP3K4Q9Y6R4 1608 aa13.83□□□□□ -0.2
HMGCLL1-205ENST00000398661 ATP7AQ04656 1500 aa13.82□□□□□ -0.2
HMGCLL1-205ENST00000398661 KIF13AQ9H1H9 1805 aa13.82□□□□□ -0.2
HMGCLL1-205ENST00000398661 ZNF518AQ6AHZ1 1483 aa13.81□□□□□ -0.2
HMGCLL1-205ENST00000398661 L3MBTL2Q969R5 705 aa13.81□□□□□ -0.2
HMGCLL1-205ENST00000398661 CCDC136Q96JN2 1154 aa13.81□□□□□ -0.2
HMGCLL1-205ENST00000398661 KDM2AQ9Y2K7 1162 aa13.81□□□□□ -0.2
HMGCLL1-205ENST00000398661 ARAP3Q8WWN8 1544 aa13.8□□□□□ -0.2
HMGCLL1-205ENST00000398661 TIMELESSQ9UNS1 1208 aa13.8□□□□□ -0.2
HMGCLL1-205ENST00000398661 RTL5Q5HYW3 569 aaPredicted RBP13.8□□□□□ -0.2
HMGCLL1-205ENST00000398661 TONSLQ96HA7 1378 aa13.79□□□□□ -0.2
HMGCLL1-205ENST00000398661 KIDINS220Q9ULH0 1771 aa13.79□□□□□ -0.2
HMGCLL1-205ENST00000398661 PPRC1Q5VV67 1664 aaKnown RBP13.79□□□□□ -0.2
HMGCLL1-205ENST00000398661 IL27Q8NEV9 243 aa13.79□□□□□ -0.2
HMGCLL1-205ENST00000398661 ANKRD30BQ9BXX2 1392 aa13.79□□□□□ -0.2
HMGCLL1-205ENST00000398661 CFAP65Q6ZU64 1925 aaKnown RBP13.79□□□□□ -0.2
HMGCLL1-205ENST00000398661 UBE2Q2Q8WVN8 375 aa13.78□□□□□ -0.2
HMGCLL1-205ENST00000398661 B4GALNT3Q6L9W6 998 aa13.77□□□□□ -0.21
HMGCLL1-205ENST00000398661 NEO1Q92859 1461 aa13.76□□□□□ -0.21
HMGCLL1-205ENST00000398661 DHX29Q7Z478 1369 aaKnown RBP13.76□□□□□ -0.21
HMGCLL1-205ENST00000398661 FAM135AQ9P2D6 1515 aa13.76□□□□□ -0.21
HMGCLL1-205ENST00000398661 DUOX2Q9NRD8 1548 aa13.75□□□□□ -0.21
HMGCLL1-205ENST00000398661 ARID4BQ4LE39 1312 aaPredicted RBP13.75□□□□□ -0.21
HMGCLL1-205ENST00000398661 GLI2P10070 1586 aa13.75□□□□□ -0.21
HMGCLL1-205ENST00000398661 INO80Q9ULG1 1556 aaPredicted RBP13.75□□□□□ -0.21
HMGCLL1-205ENST00000398661 MAST1Q9Y2H9 1570 aa13.74□□□□□ -0.21
HMGCLL1-205ENST00000398661 A2MP01023 1474 aa13.74□□□□□ -0.21
HMGCLL1-205ENST00000398661 RTEL1-TNFRSF6BF6WH68 1400 aa13.74□□□□□ -0.21
HMGCLL1-205ENST00000398661 WASHC2CQ9Y4E1 1318 aa13.74□□□□□ -0.21
HMGCLL1-205ENST00000398661 NBPF8Q3BBV2 869 aa13.73□□□□□ -0.21
HMGCLL1-205ENST00000398661 IPO9Q96P70 1041 aaKnown RBP13.73□□□□□ -0.21
HMGCLL1-205ENST00000398661 RTN4Q9NQC3 1192 aaKnown RBP13.73□□□□□ -0.21
HMGCLL1-205ENST00000398661 ABCA6Q8N139 1617 aa13.73□□□□□ -0.21
HMGCLL1-205ENST00000398661 PLXNC1O60486 1568 aa13.73□□□□□ -0.21
HMGCLL1-205ENST00000398661 FRMPD1Q5SYB0 1578 aa13.73□□□□□ -0.21
HMGCLL1-205ENST00000398661 NUTM2DQ5VT03 806 aaPredicted RBP13.72□□□□□ -0.21
HMGCLL1-205ENST00000398661 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.72□□□□□ -0.21
HMGCLL1-205ENST00000398661 ERBINQ96RT1 1412 aa13.72□□□□□ -0.21
HMGCLL1-205ENST00000398661 CHGAP10645 457 aaKnown RBP13.71□□□□□ -0.21
HMGCLL1-205ENST00000398661 ANP32AP39687 249 aaKnown RBP13.71□□□□□ -0.21
HMGCLL1-205ENST00000398661 DCAF11Q8TEB1 546 aa13.71□□□□□ -0.21
HMGCLL1-205ENST00000398661 RICTORQ6R327 1708 aa13.71□□□□□ -0.21
HMGCLL1-205ENST00000398661 KDM5CP41229 1560 aa13.71□□□□□ -0.21
HMGCLL1-205ENST00000398661 PLA2R1Q13018 1463 aa13.71□□□□□ -0.21
HMGCLL1-205ENST00000398661 FBXO31Q5XUX0 539 aaPredicted RBP13.71□□□□□ -0.21
HMGCLL1-205ENST00000398661 HECW2Q9P2P5 1572 aa13.71□□□□□ -0.22
HMGCLL1-205ENST00000398661 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
HMGCLL1-205ENST00000398661 MLH3Q9UHC1 1453 aa13.7□□□□□ -0.22
HMGCLL1-205ENST00000398661 TEX14Q8IWB6 1497 aa13.68□□□□□ -0.22
HMGCLL1-205ENST00000398661 UGGT1Q9NYU2 1555 aa13.68□□□□□ -0.22
HMGCLL1-205ENST00000398661 WASHC2AQ641Q2 1341 aa13.68□□□□□ -0.22
HMGCLL1-205ENST00000398661 DIP2CQ9Y2E4 1556 aa13.67□□□□□ -0.22
HMGCLL1-205ENST00000398661 CFAP74Q9C0B2 1584 aa13.67□□□□□ -0.22
HMGCLL1-205ENST00000398661 SIGLEC1Q9BZZ2 1709 aa13.67□□□□□ -0.22
HMGCLL1-205ENST00000398661 CEBPAP49715 358 aaPredicted RBP13.65□□□□□ -0.22
HMGCLL1-205ENST00000398661 RPRD2Q5VT52 1461 aaKnown RBP13.65□□□□□ -0.22
HMGCLL1-205ENST00000398661 CCDC144AA2RUR9 1427 aa13.64□□□□□ -0.23
HMGCLL1-205ENST00000398661 KANK1Q14678 1352 aa13.64□□□□□ -0.23
HMGCLL1-205ENST00000398661 MROH1Q8NDA8 1641 aa13.64□□□□□ -0.23
HMGCLL1-205ENST00000398661 UNC13BO14795 1591 aa13.64□□□□□ -0.23
HMGCLL1-205ENST00000398661 NBPF1Q3BBV0 1214 aa13.61□□□□□ -0.23
HMGCLL1-205ENST00000398661 CEP152O94986 1710 aa13.61□□□□□ -0.23
HMGCLL1-205ENST00000398661 KDM5DQ9BY66 1539 aa13.61□□□□□ -0.23
HMGCLL1-205ENST00000398661 E9PCH4 1651 aa13.61□□□□□ -0.23
HMGCLL1-205ENST00000398661 C11orf95C9JLR9 678 aaPredicted RBP13.61□□□□□ -0.23
HMGCLL1-205ENST00000398661 NPATQ14207 1427 aa13.61□□□□□ -0.23
HMGCLL1-205ENST00000398661 IQGAP3Q86VI3 1631 aa13.61□□□□□ -0.23
HMGCLL1-205ENST00000398661 ATP10AO60312 1499 aa13.6□□□□□ -0.23
HMGCLL1-205ENST00000398661 MAGI2Q86UL8 1455 aa13.6□□□□□ -0.23
HMGCLL1-205ENST00000398661 PRDM15P57071 1507 aaPredicted RBP13.6□□□□□ -0.23
HMGCLL1-205ENST00000398661 ZBED9Q6R2W3 1325 aa13.6□□□□□ -0.23
HMGCLL1-205ENST00000398661 CNGB1Q14028 1251 aaPredicted RBP13.59□□□□□ -0.23
HMGCLL1-205ENST00000398661 CCDC184Q52MB2 194 aa13.58□□□□□ -0.23
HMGCLL1-205ENST00000398661 POLR3GLQ9BT43 218 aa13.58□□□□□ -0.23
HMGCLL1-205ENST00000398661 USP35Q9P2H5 1018 aa13.58□□□□□ -0.23
HMGCLL1-205ENST00000398661 IDI1Q13907 227 aa13.57□□□□□ -0.24
HMGCLL1-205ENST00000398661 HSPA5P11021 654 aaKnown RBP13.57□□□□□ -0.24
HMGCLL1-205ENST00000398661 NEFMP07197 916 aa13.56□□□□□ -0.24
HMGCLL1-205ENST00000398661 ESF1Q9H501 851 aaKnown RBP13.56□□□□□ -0.24
HMGCLL1-205ENST00000398661 DEPDC5O75140 1603 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms