RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 HFM1A2PYH4 1435 aa26.21■■□□□ 1.79
CSNK1D-204ENST00000398519 NAIPQ13075 1403 aa26.21■■□□□ 1.79
CSNK1D-204ENST00000398519 DEPDC5O75140 1603 aa26.2■■□□□ 1.78
CSNK1D-204ENST00000398519 RIMS1Q86UR5 1692 aaKnown RBP26.18■■□□□ 1.78
CSNK1D-204ENST00000398519 PRDM15P57071 1507 aaPredicted RBP26.17■■□□□ 1.78
CSNK1D-204ENST00000398519 CLTCQ00610 1675 aaKnown RBP26.13■■□□□ 1.77
CSNK1D-204ENST00000398519 KDM5DQ9BY66 1539 aa26.13■■□□□ 1.77
CSNK1D-204ENST00000398519 PPP6R1Q9UPN7 881 aa26.13■■□□□ 1.77
CSNK1D-204ENST00000398519 FAM135AQ9P2D6 1515 aa26.13■■□□□ 1.77
CSNK1D-204ENST00000398519 PTPRMP28827 1452 aa26.12■■□□□ 1.77
CSNK1D-204ENST00000398519 UNC13BO14795 1591 aa26.11■■□□□ 1.77
CSNK1D-204ENST00000398519 CNTLNQ9NXG0 1405 aa26.11■■□□□ 1.77
CSNK1D-204ENST00000398519 ESF1Q9H501 851 aaKnown RBP26.1■■□□□ 1.77
CSNK1D-204ENST00000398519 ABCC3O15438 1527 aa26.09■■□□□ 1.77
CSNK1D-204ENST00000398519 MROH2AA6NES4 1674 aa26.09■■□□□ 1.77
CSNK1D-204ENST00000398519 ZC3H13Q5T200 1668 aaKnown RBP26.09■■□□□ 1.77
CSNK1D-204ENST00000398519 VWDEQ8N2E2 1590 aa26.09■■□□□ 1.77
CSNK1D-204ENST00000398519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.08■■□□□ 1.775e-7■□□□□ 9.7
CSNK1D-204ENST00000398519 WASHC2CQ9Y4E1 1318 aa26.08■■□□□ 1.77
CSNK1D-204ENST00000398519 CEP152O94986 1710 aa26.07■■□□□ 1.76
CSNK1D-204ENST00000398519 TRIM26Q12899 539 aaPredicted RBP26.07■■□□□ 1.76
CSNK1D-204ENST00000398519 KANK1Q14678 1352 aa26.05■■□□□ 1.76
CSNK1D-204ENST00000398519 C3P01024 1663 aa26.05■■□□□ 1.76
CSNK1D-204ENST00000398519 SETD5Q9C0A6 1442 aa26.04■■□□□ 1.76
CSNK1D-204ENST00000398519 ZMYM3Q14202 1370 aa26.03■■□□□ 1.76
CSNK1D-204ENST00000398519 LMTK2Q8IWU2 1503 aa26.02■■□□□ 1.76
CSNK1D-204ENST00000398519 CAMSAP1Q5T5Y3 1602 aa26.02■■□□□ 1.76
CSNK1D-204ENST00000398519 IQGAP3Q86VI3 1631 aa26■■□□□ 1.75
CSNK1D-204ENST00000398519 CEBPAP49715 358 aaPredicted RBP26■■□□□ 1.75
CSNK1D-204ENST00000398519 NUP155O75694 1391 aa25.99■■□□□ 1.75
CSNK1D-204ENST00000398519 PLPPR3Q6T4P5 718 aa25.99■■□□□ 1.75
CSNK1D-204ENST00000398519 RAB3GAP2Q9H2M9 1393 aa25.97■■□□□ 1.75
CSNK1D-204ENST00000398519 PZPP20742 1482 aa25.95■■□□□ 1.75
CSNK1D-204ENST00000398519 EFCAB6Q5THR3 1501 aa25.95■■□□□ 1.74
CSNK1D-204ENST00000398519 TET3O43151 1660 aa25.95■■□□□ 1.74
CSNK1D-204ENST00000398519 ARHGAP31Q2M1Z3 1444 aa25.92■■□□□ 1.74
CSNK1D-204ENST00000398519 NPATQ14207 1427 aa25.92■■□□□ 1.74
CSNK1D-204ENST00000398519 TRIM52Q96A61 297 aa25.9■■□□□ 1.74
CSNK1D-204ENST00000398519 FBXO31Q5XUX0 539 aaPredicted RBP25.88■■□□□ 1.73
CSNK1D-204ENST00000398519 AEBP2Q6ZN18 517 aaPredicted RBP25.88■■□□□ 1.73
CSNK1D-204ENST00000398519 E9PCH4 1651 aa25.87■■□□□ 1.73
CSNK1D-204ENST00000398519 PREX1Q8TCU6 1659 aa25.86■■□□□ 1.73
CSNK1D-204ENST00000398519 SPATA31D1Q6ZQQ2 1576 aa25.86■■□□□ 1.73
CSNK1D-204ENST00000398519 ERVK-7P63135 1459 aa25.86■■□□□ 1.73
CSNK1D-204ENST00000398519 RPRD2Q5VT52 1461 aaKnown RBP25.85■■□□□ 1.73
CSNK1D-204ENST00000398519 HRCP23327 699 aa25.84■■□□□ 1.73
CSNK1D-204ENST00000398519 ACIN1Q9UKV3 1341 aaKnown RBP25.84■■□□□ 1.73
CSNK1D-204ENST00000398519 CFAP65Q6ZU64 1925 aaKnown RBP25.82■■□□□ 1.72
CSNK1D-204ENST00000398519 MYO3AQ8NEV4 1616 aa25.8■■□□□ 1.72
CSNK1D-204ENST00000398519 TNRQ92752 1358 aa25.8■■□□□ 1.72
CSNK1D-204ENST00000398519 SLC4A1APQ9BWU0 796 aaKnown RBP25.8■■□□□ 1.72
CSNK1D-204ENST00000398519 NOS1P29475 1434 aa25.79■■□□□ 1.72
CSNK1D-204ENST00000398519 SETD1BQ9UPS6 1966 aaKnown RBP25.79■■□□□ 1.72
CSNK1D-204ENST00000398519 SYNMO15061 1565 aa25.77■■□□□ 1.72
CSNK1D-204ENST00000398519 MPHOSPH9Q99550 1183 aa25.77■■□□□ 1.72
CSNK1D-204ENST00000398519 PKD2Q13563 968 aa25.76■■□□□ 1.71
CSNK1D-204ENST00000398519 PCGF6Q9BYE7 350 aa25.76■■□□□ 1.71
CSNK1D-204ENST00000398519 UHRF1BP1Q6BDS2 1440 aa25.75■■□□□ 1.71
CSNK1D-204ENST00000398519 LMTK3Q96Q04 1460 aa25.74■■□□□ 1.71
CSNK1D-204ENST00000398519 SPHKAPQ2M3C7 1700 aa25.72■■□□□ 1.71
CSNK1D-204ENST00000398519 ZNF142P52746 1687 aaPredicted RBP25.72■■□□□ 1.71
CSNK1D-204ENST00000398519 NLRP1Q9C000 1473 aa25.72■■□□□ 1.71
CSNK1D-204ENST00000398519 CEP170BQ9Y4F5 1589 aaPredicted RBP25.71■■□□□ 1.71
CSNK1D-204ENST00000398519 PTPRTO14522 1441 aa25.71■■□□□ 1.71
CSNK1D-204ENST00000398519 FOXD1Q16676 465 aa25.69■■□□□ 1.7
CSNK1D-204ENST00000398519 A2ML1A8K2U0 1454 aa25.68■■□□□ 1.7
CSNK1D-204ENST00000398519 UGGT1Q9NYU2 1555 aa25.68■■□□□ 1.7
CSNK1D-204ENST00000398519 PIK3C2BO00750 1634 aa25.67■■□□□ 1.7
CSNK1D-204ENST00000398519 PLA2R1Q13018 1463 aa25.67■■□□□ 1.7
CSNK1D-204ENST00000398519 TRPM2O94759 1503 aa25.66■■□□□ 1.7
CSNK1D-204ENST00000398519 IDI1Q13907 227 aa25.64■■□□□ 1.69
CSNK1D-204ENST00000398519 SLC52A1Q9NWF4 448 aa25.63■■□□□ 1.69
CSNK1D-204ENST00000398519 UBR1Q8IWV7 1749 aa25.61■■□□□ 1.69
CSNK1D-204ENST00000398519 CLTCL1P53675 1640 aa25.6■■□□□ 1.69
CSNK1D-204ENST00000398519 HSPA2P54652 639 aa25.6■■□□□ 1.69
CSNK1D-204ENST00000398519 ADGRB3O60242 1522 aa25.58■■□□□ 1.69
CSNK1D-204ENST00000398519 KDM5AP29375 1690 aaKnown RBP25.58■■□□□ 1.69
CSNK1D-204ENST00000398519 TMEM131LA2VDJ0 1609 aa25.55■■□□□ 1.68
CSNK1D-204ENST00000398519 DHX57Q6P158 1386 aaKnown RBP25.54■■□□□ 1.68
CSNK1D-204ENST00000398519 ANKRD30BQ9BXX2 1392 aa25.53■■□□□ 1.68
CSNK1D-204ENST00000398519 THEMISQ8N1K5 641 aaPredicted RBP25.52■■□□□ 1.68
CSNK1D-204ENST00000398519 MYO5BQ9ULV0 1848 aa25.52■■□□□ 1.68
CSNK1D-204ENST00000398519 CCDC144AA2RUR9 1427 aa25.52■■□□□ 1.68
CSNK1D-204ENST00000398519 STAG3Q9UJ98 1225 aa25.52■■□□□ 1.68
CSNK1D-204ENST00000398519 KIF1BO60333 1816 aa25.48■■□□□ 1.67
CSNK1D-204ENST00000398519 CHGAP10645 457 aaKnown RBP25.48■■□□□ 1.67
CSNK1D-204ENST00000398519 SLIT1O75093 1534 aa25.48■■□□□ 1.67
CSNK1D-204ENST00000398519 ARHGAP23Q9P227 1491 aa25.47■■□□□ 1.67
CSNK1D-204ENST00000398519 STRCQ7RTU9 1775 aa25.46■■□□□ 1.67
CSNK1D-204ENST00000398519 TMEM2Q9UHN6 1383 aa25.45■■□□□ 1.67
CSNK1D-204ENST00000398519 POLR1AO95602 1720 aaPredicted RBP25.42■■□□□ 1.66
CSNK1D-204ENST00000398519 ZFYVE9O95405 1425 aa25.41■■□□□ 1.66
CSNK1D-204ENST00000398519 SPATA31E1Q6ZUB1 1445 aa25.41■■□□□ 1.66
CSNK1D-204ENST00000398519 NCKAP5LQ9HCH0 1330 aa25.4■■□□□ 1.66
CSNK1D-204ENST00000398519 NEURL4Q96JN8 1562 aa25.4■■□□□ 1.66
CSNK1D-204ENST00000398519 SCAF11Q99590 1463 aaKnown RBP25.39■■□□□ 1.65
CSNK1D-204ENST00000398519 RIMS2Q9UQ26 1411 aa25.39■■□□□ 1.65
CSNK1D-204ENST00000398519 ANKLE2Q86XL3 938 aa25.39■■□□□ 1.65
CSNK1D-204ENST00000398519 LTKP29376 864 aa25.38■■□□□ 1.65
CSNK1D-204ENST00000398519 ZNF326Q5BKZ1 582 aaKnown RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms