RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 GGT6Q6P531 493 aa16.06■□□□□ 0.16
LDHC-202ENST00000396215 GPATCH8Q9UKJ3 1502 aaKnown RBP16.05■□□□□ 0.16
LDHC-202ENST00000396215 MED14O60244 1454 aa16.05■□□□□ 0.16
LDHC-202ENST00000396215 CASKIN1Q8WXD9 1431 aa16.05■□□□□ 0.16
LDHC-202ENST00000396215 HNRNPMP52272 730 aaKnown RBP eCLIP16.05■□□□□ 0.16
LDHC-202ENST00000396215 PLEKHH2Q8IVE3 1493 aa16.04■□□□□ 0.16
LDHC-202ENST00000396215 UBTFP17480 764 aaKnown RBP16.04■□□□□ 0.16
LDHC-202ENST00000396215 RGS17Q9UGC6 210 aaPredicted RBP16.04■□□□□ 0.16
LDHC-202ENST00000396215 ANKLE2Q86XL3 938 aa16.03■□□□□ 0.16
LDHC-202ENST00000396215 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.16
LDHC-202ENST00000396215 ZNF777Q9ULD5 760 aaPredicted RBP16.02■□□□□ 0.16
LDHC-202ENST00000396215 DEPDC5O75140 1603 aa16.01■□□□□ 0.15
LDHC-202ENST00000396215 TNRQ92752 1358 aa16.01■□□□□ 0.15
LDHC-202ENST00000396215 FAM135AQ9P2D6 1515 aa16■□□□□ 0.15
LDHC-202ENST00000396215 PZPP20742 1482 aa15.99■□□□□ 0.15
LDHC-202ENST00000396215 THEMISQ8N1K5 641 aaPredicted RBP15.99■□□□□ 0.15
LDHC-202ENST00000396215 NPHP4O75161 1426 aaPredicted RBP15.98■□□□□ 0.15
LDHC-202ENST00000396215 LRRC7Q96NW7 1537 aa15.98■□□□□ 0.15
LDHC-202ENST00000396215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.98■□□□□ 0.15
LDHC-202ENST00000396215 FBXO31Q5XUX0 539 aaPredicted RBP15.97■□□□□ 0.15
LDHC-202ENST00000396215 NLRP1Q9C000 1473 aa15.97■□□□□ 0.15
LDHC-202ENST00000396215 RTEL1-TNFRSF6BF6WH68 1400 aa15.96■□□□□ 0.15
LDHC-202ENST00000396215 CFDP1Q9UEE9 299 aaPredicted RBP15.96■□□□□ 0.15
LDHC-202ENST00000396215 RNF17Q9BXT8 1623 aaKnown RBP15.96■□□□□ 0.15
LDHC-202ENST00000396215 DHX29Q7Z478 1369 aaKnown RBP15.96■□□□□ 0.15
LDHC-202ENST00000396215 STRCP1A6NGW2 1772 aa15.95■□□□□ 0.14
LDHC-202ENST00000396215 MIA2Q96PC5 1412 aa15.95■□□□□ 0.14
LDHC-202ENST00000396215 SYNMO15061 1565 aa15.95■□□□□ 0.14
LDHC-202ENST00000396215 HOXD11P31277 338 aaPredicted RBP15.94■□□□□ 0.14
LDHC-202ENST00000396215 FYCO1Q9BQS8 1478 aa15.94■□□□□ 0.14
LDHC-202ENST00000396215 IQGAP1P46940 1657 aa15.94■□□□□ 0.14
LDHC-202ENST00000396215 UGGT1Q9NYU2 1555 aa15.93■□□□□ 0.14
LDHC-202ENST00000396215 KDM5DQ9BY66 1539 aa15.93■□□□□ 0.14
LDHC-202ENST00000396215 MBD5Q9P267 1494 aa15.92■□□□□ 0.14
LDHC-202ENST00000396215 CCNB3Q8WWL7 1395 aa15.9■□□□□ 0.14
LDHC-202ENST00000396215 NCBP3Q53F19 620 aaKnown RBP15.88■□□□□ 0.13
LDHC-202ENST00000396215 POTEAQ6S8J7 498 aa15.88■□□□□ 0.13
LDHC-202ENST00000396215 RNF216Q9NWF9 866 aaPredicted RBP15.88■□□□□ 0.13
LDHC-202ENST00000396215 WASHC2CQ9Y4E1 1318 aa15.88■□□□□ 0.13
LDHC-202ENST00000396215 KIF3BO15066 747 aa15.87■□□□□ 0.13
LDHC-202ENST00000396215 EHMT2Q96KQ7 1210 aa15.87■□□□□ 0.13
LDHC-202ENST00000396215 FAM135BQ49AJ0 1406 aa15.86■□□□□ 0.13
LDHC-202ENST00000396215 ZC3H13Q5T200 1668 aaKnown RBP15.86■□□□□ 0.13
LDHC-202ENST00000396215 ZNF644Q9H582 1327 aaPredicted RBP15.85■□□□□ 0.13
LDHC-202ENST00000396215 XIRP1Q702N8 1843 aaKnown RBP15.83■□□□□ 0.12
LDHC-202ENST00000396215 TIAM1Q13009 1591 aa15.81■□□□□ 0.12
LDHC-202ENST00000396215 RSPH4AQ5TD94 716 aa15.81■□□□□ 0.12
LDHC-202ENST00000396215 DCAF8L1A6NGE4 600 aa15.79■□□□□ 0.12
LDHC-202ENST00000396215 CCDC141Q6ZP82 1450 aa15.78■□□□□ 0.12
LDHC-202ENST00000396215 SCAF11Q99590 1463 aaKnown RBP15.78■□□□□ 0.12
LDHC-202ENST00000396215 MTUS2Q5JR59 1369 aa15.78■□□□□ 0.12
LDHC-202ENST00000396215 ARHGAP23Q9P227 1491 aa15.78■□□□□ 0.12
LDHC-202ENST00000396215 SLIT1O75093 1534 aa15.77■□□□□ 0.11
LDHC-202ENST00000396215 ERVK-7P63135 1459 aa15.77■□□□□ 0.11
LDHC-202ENST00000396215 UBR1Q8IWV7 1749 aa15.77■□□□□ 0.11
LDHC-202ENST00000396215 SRCAPQ6ZRS2 3230 aa15.76■□□□□ 0.11
LDHC-202ENST00000396215 NCOA2Q15596 1464 aa15.76■□□□□ 0.11
LDHC-202ENST00000396215 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
LDHC-202ENST00000396215 ABCC3O15438 1527 aa15.75■□□□□ 0.11
LDHC-202ENST00000396215 LTKP29376 864 aa15.75■□□□□ 0.11
LDHC-202ENST00000396215 SETD1AO15047 1707 aaKnown RBP15.73■□□□□ 0.11
LDHC-202ENST00000396215 EHBP1L1Q8N3D4 1523 aa15.73■□□□□ 0.11
LDHC-202ENST00000396215 TXNDC2Q86VQ3 553 aa15.72■□□□□ 0.11
LDHC-202ENST00000396215 ROBO1Q9Y6N7 1651 aa15.72■□□□□ 0.11
LDHC-202ENST00000396215 UPF1Q92900 1129 aaKnown RBP eCLIP15.71■□□□□ 0.11
LDHC-202ENST00000396215 LRRC9Q6ZRR7 1453 aa15.71■□□□□ 0.1
LDHC-202ENST00000396215 ARHGEF5Q12774 1597 aa15.7■□□□□ 0.1
LDHC-202ENST00000396215 TMEM94Q12767 1356 aa15.7■□□□□ 0.1
LDHC-202ENST00000396215 CAMSAP2Q08AD1 1489 aa15.7■□□□□ 0.1
LDHC-202ENST00000396215 MAP3K1Q13233 1512 aa15.68■□□□□ 0.1
LDHC-202ENST00000396215 TSPY4P0CV99 314 aa15.68■□□□□ 0.1
LDHC-202ENST00000396215 TSPY10P0CW01 314 aa15.68■□□□□ 0.1
LDHC-202ENST00000396215 KCNA6P17658 529 aa15.68■□□□□ 0.1
LDHC-202ENST00000396215 EID1Q9Y6B2 187 aa15.68■□□□□ 0.1
LDHC-202ENST00000396215 EIF2AK4Q9P2K8 1649 aaKnown RBP15.68■□□□□ 0.1
LDHC-202ENST00000396215 JCADQ9P266 1359 aa15.67■□□□□ 0.1
LDHC-202ENST00000396215 MROH1Q8NDA8 1641 aa15.67■□□□□ 0.1
LDHC-202ENST00000396215 ARHGAP31Q2M1Z3 1444 aa15.67■□□□□ 0.1
LDHC-202ENST00000396215 NPM3O75607 178 aaKnown RBP15.66■□□□□ 0.1
LDHC-202ENST00000396215 CFAP65Q6ZU64 1925 aaKnown RBP15.65■□□□□ 0.1
LDHC-202ENST00000396215 MAST1Q9Y2H9 1570 aa15.65■□□□□ 0.1
LDHC-202ENST00000396215 TMEM2Q9UHN6 1383 aa15.64■□□□□ 0.09
LDHC-202ENST00000396215 TET3O43151 1660 aa15.63■□□□□ 0.09
LDHC-202ENST00000396215 PRDM15P57071 1507 aaPredicted RBP15.63■□□□□ 0.09
LDHC-202ENST00000396215 KDM5AP29375 1690 aaKnown RBP15.63■□□□□ 0.09
LDHC-202ENST00000396215 PHLPP1O60346 1717 aa15.63■□□□□ 0.09
LDHC-202ENST00000396215 ZNF772Q68DY9 489 aaPredicted RBP15.62■□□□□ 0.09
LDHC-202ENST00000396215 PROSER2Q86WR7 435 aaPredicted RBP15.62■□□□□ 0.09
LDHC-202ENST00000396215 NKTRP30414 1462 aaKnown RBP15.62■□□□□ 0.09
LDHC-202ENST00000396215 CEP152O94986 1710 aa15.62■□□□□ 0.09
LDHC-202ENST00000396215 SLAIN2Q9P270 581 aa15.61■□□□□ 0.09
LDHC-202ENST00000396215 SPATA31A6Q5VVP1 1343 aa15.61■□□□□ 0.09
LDHC-202ENST00000396215 NWD1Q149M9 1564 aa15.61■□□□□ 0.09
LDHC-202ENST00000396215 FGD6Q6ZV73 1430 aa15.6■□□□□ 0.09
LDHC-202ENST00000396215 PIK3C2BO00750 1634 aa15.59■□□□□ 0.09
LDHC-202ENST00000396215 COL16A1Q07092 1604 aaPredicted RBP15.59■□□□□ 0.09
LDHC-202ENST00000396215 MSH6P52701 1360 aa15.59■□□□□ 0.09
LDHC-202ENST00000396215 LRP6O75581 1613 aa15.58■□□□□ 0.09
LDHC-202ENST00000396215 CDK12Q9NYV4 1490 aaPredicted RBP15.58■□□□□ 0.08
LDHC-202ENST00000396215 EFCAB6Q5THR3 1501 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms