RNA–Protein interactions for RNA: ENST00000394738.7

RFT1-202, Transcript of RFT1 homolog, humanhuman

TSL 5 BASIC

Gene RFT1, Length 1,800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-202ENST00000394738 DEPDC5O75140 1603 aa30.43■■■□□ 2.46
RFT1-202ENST00000394738 RNF17Q9BXT8 1623 aaKnown RBP30.43■■■□□ 2.46
RFT1-202ENST00000394738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.42■■■□□ 2.46
RFT1-202ENST00000394738 MROH1Q8NDA8 1641 aa30.41■■■□□ 2.46
RFT1-202ENST00000394738 UNC13BO14795 1591 aa30.4■■■□□ 2.46
RFT1-202ENST00000394738 TRIM52Q96A61 297 aa30.38■■■□□ 2.45
RFT1-202ENST00000394738 HRCP23327 699 aa30.35■■■□□ 2.45
RFT1-202ENST00000394738 PRDM15P57071 1507 aaPredicted RBP30.34■■■□□ 2.45
RFT1-202ENST00000394738 NUP155O75694 1391 aa30.34■■■□□ 2.45
RFT1-202ENST00000394738 CEP152O94986 1710 aa30.32■■■□□ 2.44
RFT1-202ENST00000394738 KANK1Q14678 1352 aa30.29■■■□□ 2.44
RFT1-202ENST00000394738 IQGAP3Q86VI3 1631 aa30.29■■■□□ 2.44
RFT1-202ENST00000394738 VWDEQ8N2E2 1590 aa30.28■■■□□ 2.44
RFT1-202ENST00000394738 KDM5DQ9BY66 1539 aa30.27■■■□□ 2.44
RFT1-202ENST00000394738 CLTCQ00610 1675 aaKnown RBP30.26■■■□□ 2.43
RFT1-202ENST00000394738 WASHC2CQ9Y4E1 1318 aa30.26■■■□□ 2.43
RFT1-202ENST00000394738 FAM135AQ9P2D6 1515 aa30.25■■■□□ 2.43
RFT1-202ENST00000394738 FER1L4A9Z1Z3 1794 aa30.25■■■□□ 2.43
RFT1-202ENST00000394738 PZPP20742 1482 aa30.24■■■□□ 2.43
RFT1-202ENST00000394738 ACIN1Q9UKV3 1341 aaKnown RBP30.24■■■□□ 2.43
RFT1-202ENST00000394738 ABCC3O15438 1527 aa30.23■■■□□ 2.43
RFT1-202ENST00000394738 ZC3H13Q5T200 1668 aaKnown RBP30.23■■■□□ 2.43
RFT1-202ENST00000394738 ADAMTSL3P82987 1691 aa30.22■■■□□ 2.43
RFT1-202ENST00000394738 PPP6R1Q9UPN7 881 aa30.21■■■□□ 2.43
RFT1-202ENST00000394738 MADDQ8WXG6 1647 aa30.2■■■□□ 2.43
RFT1-202ENST00000394738 MPHOSPH9Q99550 1183 aa30.19■■■□□ 2.42
RFT1-202ENST00000394738 SLC4A1APQ9BWU0 796 aaKnown RBP30.19■■■□□ 2.42
RFT1-202ENST00000394738 ESF1Q9H501 851 aaKnown RBP30.19■■■□□ 2.42
RFT1-202ENST00000394738 TET3O43151 1660 aa30.18■■■□□ 2.42
RFT1-202ENST00000394738 CAMSAP1Q5T5Y3 1602 aa30.18■■■□□ 2.42
RFT1-202ENST00000394738 LMTK2Q8IWU2 1503 aa30.17■■■□□ 2.42
RFT1-202ENST00000394738 CFAP65Q6ZU64 1925 aaKnown RBP30.17■■■□□ 2.42
RFT1-202ENST00000394738 RIMS1Q86UR5 1692 aaKnown RBP30.15■■■□□ 2.42
RFT1-202ENST00000394738 E9PCH4 1651 aa30.14■■■□□ 2.41
RFT1-202ENST00000394738 EFCAB6Q5THR3 1501 aa30.12■■■□□ 2.41
RFT1-202ENST00000394738 PKD2Q13563 968 aa30.12■■■□□ 2.41
RFT1-202ENST00000394738 MROH2AA6NES4 1674 aa30.11■■■□□ 2.41
RFT1-202ENST00000394738 CNTLNQ9NXG0 1405 aa30.1■■■□□ 2.41
RFT1-202ENST00000394738 DHX57Q6P158 1386 aaKnown RBP30.1■■■□□ 2.41
RFT1-202ENST00000394738 FOXD1Q16676 465 aa30.1■■■□□ 2.41
RFT1-202ENST00000394738 ZMYM3Q14202 1370 aa30.08■■■□□ 2.41
RFT1-202ENST00000394738 C3P01024 1663 aa30.07■■■□□ 2.4
RFT1-202ENST00000394738 NPATQ14207 1427 aa30.06■■■□□ 2.4
RFT1-202ENST00000394738 PLPPR3Q6T4P5 718 aa30.05■■■□□ 2.4
RFT1-202ENST00000394738 KDM4FA0A1W2PPD8 638 aa30.04■■■□□ 2.4
RFT1-202ENST00000394738 CEBPAP49715 358 aaPredicted RBP30.03■■■□□ 2.4
RFT1-202ENST00000394738 ARHGAP31Q2M1Z3 1444 aa30.03■■■□□ 2.4
RFT1-202ENST00000394738 PREX1Q8TCU6 1659 aa30■■■□□ 2.39
RFT1-202ENST00000394738 FBXO31Q5XUX0 539 aaPredicted RBP30■■■□□ 2.39
RFT1-202ENST00000394738 RPRD2Q5VT52 1461 aaKnown RBP29.99■■■□□ 2.39
RFT1-202ENST00000394738 SPHKAPQ2M3C7 1700 aa29.99■■■□□ 2.39
RFT1-202ENST00000394738 PTPRMP28827 1452 aa29.96■■■□□ 2.39
RFT1-202ENST00000394738 CCER1Q8TC90 406 aaPredicted RBP29.94■■■□□ 2.38
RFT1-202ENST00000394738 ERVK-7P63135 1459 aa29.93■■■□□ 2.38
RFT1-202ENST00000394738 PLA2R1Q13018 1463 aa29.92■■■□□ 2.38
RFT1-202ENST00000394738 SPATA31D1Q6ZQQ2 1576 aa29.91■■■□□ 2.38
RFT1-202ENST00000394738 PTPRTO14522 1441 aa29.9■■■□□ 2.38
RFT1-202ENST00000394738 ANKRD30BQ9BXX2 1392 aa29.9■■■□□ 2.38
RFT1-202ENST00000394738 NOS1P29475 1434 aa29.9■■■□□ 2.38
RFT1-202ENST00000394738 SYNMO15061 1565 aa29.9■■■□□ 2.38
RFT1-202ENST00000394738 TRPM2O94759 1503 aa29.87■■■□□ 2.37
RFT1-202ENST00000394738 UGGT1Q9NYU2 1555 aa29.86■■■□□ 2.37
RFT1-202ENST00000394738 CLTCL1P53675 1640 aa29.83■■■□□ 2.37
RFT1-202ENST00000394738 TNRQ92752 1358 aa29.83■■■□□ 2.37
RFT1-202ENST00000394738 SIN3AQ96ST3 1273 aa29.81■■■□□ 2.36
RFT1-202ENST00000394738 SETD1BQ9UPS6 1966 aaKnown RBP29.8■■■□□ 2.36
RFT1-202ENST00000394738 PIK3C2BO00750 1634 aa29.8■■■□□ 2.36
RFT1-202ENST00000394738 CCDC144AA2RUR9 1427 aa29.79■■■□□ 2.36
RFT1-202ENST00000394738 IDI1Q13907 227 aa29.78■■■□□ 2.36
RFT1-202ENST00000394738 KIF1BO60333 1816 aa29.76■■■□□ 2.35
RFT1-202ENST00000394738 MYO3AQ8NEV4 1616 aa29.75■■■□□ 2.35
RFT1-202ENST00000394738 NEUROD1Q13562 356 aa29.75■■■□□ 2.35
RFT1-202ENST00000394738 SLC52A1Q9NWF4 448 aa29.75■■■□□ 2.35
RFT1-202ENST00000394738 CLSPNQ9HAW4 1339 aa29.73■■■□□ 2.35
RFT1-202ENST00000394738 MYO5BQ9ULV0 1848 aa29.72■■■□□ 2.35
RFT1-202ENST00000394738 CHGAP10645 457 aaKnown RBP29.69■■■□□ 2.34
RFT1-202ENST00000394738 NLRP1Q9C000 1473 aa29.69■■■□□ 2.34
RFT1-202ENST00000394738 TMEM131LA2VDJ0 1609 aa29.66■■■□□ 2.34
RFT1-202ENST00000394738 UBR1Q8IWV7 1749 aa29.65■■■□□ 2.34
RFT1-202ENST00000394738 STAG3Q9UJ98 1225 aa29.64■■■□□ 2.34
RFT1-202ENST00000394738 CEP170BQ9Y4F5 1589 aaPredicted RBP29.64■■■□□ 2.34
RFT1-202ENST00000394738 ADGRB3O60242 1522 aa29.63■■■□□ 2.33
RFT1-202ENST00000394738 ZNF142P52746 1687 aaPredicted RBP29.63■■■□□ 2.33
RFT1-202ENST00000394738 RGL3Q3MIN7 710 aa29.62■■■□□ 2.33
RFT1-202ENST00000394738 A2ML1A8K2U0 1454 aa29.62■■■□□ 2.33
RFT1-202ENST00000394738 UHRF1BP1Q6BDS2 1440 aa29.62■■■□□ 2.33
RFT1-202ENST00000394738 SPATA31E1Q6ZUB1 1445 aa29.62■■■□□ 2.33
RFT1-202ENST00000394738 KDM5AP29375 1690 aaKnown RBP29.6■■■□□ 2.33
RFT1-202ENST00000394738 ZNF326Q5BKZ1 582 aaKnown RBP29.57■■■□□ 2.32
RFT1-202ENST00000394738 NEURL4Q96JN8 1562 aa29.55■■■□□ 2.32
RFT1-202ENST00000394738 TONSLQ96HA7 1378 aa29.52■■■□□ 2.32
RFT1-202ENST00000394738 THEMISQ8N1K5 641 aaPredicted RBP29.51■■■□□ 2.31
RFT1-202ENST00000394738 L3MBTL2Q969R5 705 aa29.5■■■□□ 2.31
RFT1-202ENST00000394738 IFT172Q9UG01 1749 aa29.5■■■□□ 2.31
RFT1-202ENST00000394738 PPLO60437 1756 aa29.5■■■□□ 2.31
RFT1-202ENST00000394738 LMTK3Q96Q04 1460 aa29.48■■■□□ 2.31
RFT1-202ENST00000394738 NEXMIFQ5QGS0 1516 aa29.47■■■□□ 2.31
RFT1-202ENST00000394738 NUTM2DQ5VT03 806 aaPredicted RBP29.47■■■□□ 2.31
RFT1-202ENST00000394738 DCAF11Q8TEB1 546 aa29.46■■■□□ 2.31
RFT1-202ENST00000394738 TMEM2Q9UHN6 1383 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms