RNA–Protein interactions for RNA: ENST00000394225.6

NDUFC1-202, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

TSL 2

Gene NDUFC1, Length 664 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-202ENST00000394225 MADDQ8WXG6 1647 aa22.97■■□□□ 1.27
NDUFC1-202ENST00000394225 FER1L4A9Z1Z3 1794 aa22.97■■□□□ 1.27
NDUFC1-202ENST00000394225 GGT6Q6P531 493 aa22.95■■□□□ 1.26
NDUFC1-202ENST00000394225 ESF1Q9H501 851 aaKnown RBP22.95■■□□□ 1.26
NDUFC1-202ENST00000394225 ANKRD50Q9ULJ7 1429 aa22.95■■□□□ 1.26
NDUFC1-202ENST00000394225 RNF17Q9BXT8 1623 aaKnown RBP22.94■■□□□ 1.26
NDUFC1-202ENST00000394225 FAM135AQ9P2D6 1515 aa22.92■■□□□ 1.26
NDUFC1-202ENST00000394225 CNTLNQ9NXG0 1405 aa22.91■■□□□ 1.26
NDUFC1-202ENST00000394225 RIMS1Q86UR5 1692 aaKnown RBP22.91■■□□□ 1.26
NDUFC1-202ENST00000394225 GCC2Q8IWJ2 1684 aa22.89■■□□□ 1.25
NDUFC1-202ENST00000394225 HFM1A2PYH4 1435 aa22.89■■□□□ 1.25
NDUFC1-202ENST00000394225 DEPDC5O75140 1603 aa22.88■■□□□ 1.25
NDUFC1-202ENST00000394225 PTPRMP28827 1452 aa22.87■■□□□ 1.25
NDUFC1-202ENST00000394225 NAIPQ13075 1403 aa22.87■■□□□ 1.25
NDUFC1-202ENST00000394225 PRDM15P57071 1507 aaPredicted RBP22.87■■□□□ 1.25
NDUFC1-202ENST00000394225 KDM5DQ9BY66 1539 aa22.87■■□□□ 1.25
NDUFC1-202ENST00000394225 MROH2AA6NES4 1674 aa22.86■■□□□ 1.25
NDUFC1-202ENST00000394225 MROH1Q8NDA8 1641 aa22.86■■□□□ 1.25
NDUFC1-202ENST00000394225 ZC3H13Q5T200 1668 aaKnown RBP22.85■■□□□ 1.25
NDUFC1-202ENST00000394225 KANK1Q14678 1352 aa22.85■■□□□ 1.25
NDUFC1-202ENST00000394225 WASHC2CQ9Y4E1 1318 aa22.84■■□□□ 1.25
NDUFC1-202ENST00000394225 CLTCQ00610 1675 aaKnown RBP22.84■■□□□ 1.25
NDUFC1-202ENST00000394225 UNC13BO14795 1591 aa22.81■■□□□ 1.24
NDUFC1-202ENST00000394225 PIAS4Q8N2W9 510 aaPredicted RBP22.81■■□□□ 1.24
NDUFC1-202ENST00000394225 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.8■■□□□ 1.24
NDUFC1-202ENST00000394225 ABCC3O15438 1527 aa22.8■■□□□ 1.24
NDUFC1-202ENST00000394225 ZMYM3Q14202 1370 aa22.78■■□□□ 1.24
NDUFC1-202ENST00000394225 C3P01024 1663 aa22.77■■□□□ 1.24
NDUFC1-202ENST00000394225 VWDEQ8N2E2 1590 aa22.77■■□□□ 1.24
NDUFC1-202ENST00000394225 CEP152O94986 1710 aa22.77■■□□□ 1.23
NDUFC1-202ENST00000394225 LMTK2Q8IWU2 1503 aa22.75■■□□□ 1.23
NDUFC1-202ENST00000394225 CAMSAP1Q5T5Y3 1602 aa22.74■■□□□ 1.23
NDUFC1-202ENST00000394225 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
NDUFC1-202ENST00000394225 ACIN1Q9UKV3 1341 aaKnown RBP22.73■■□□□ 1.23
NDUFC1-202ENST00000394225 CEBPAP49715 358 aaPredicted RBP22.72■■□□□ 1.23
NDUFC1-202ENST00000394225 TRIM26Q12899 539 aaPredicted RBP22.72■■□□□ 1.23
NDUFC1-202ENST00000394225 NUP155O75694 1391 aa22.72■■□□□ 1.23
NDUFC1-202ENST00000394225 PZPP20742 1482 aa22.72■■□□□ 1.23
NDUFC1-202ENST00000394225 IQGAP3Q86VI3 1631 aa22.71■■□□□ 1.23
NDUFC1-202ENST00000394225 NPATQ14207 1427 aa22.71■■□□□ 1.23
NDUFC1-202ENST00000394225 ARHGAP31Q2M1Z3 1444 aa22.7■■□□□ 1.22
NDUFC1-202ENST00000394225 TET3O43151 1660 aa22.68■■□□□ 1.22
NDUFC1-202ENST00000394225 EFCAB6Q5THR3 1501 aa22.68■■□□□ 1.22
NDUFC1-202ENST00000394225 SETD1BQ9UPS6 1966 aaKnown RBP22.65■■□□□ 1.22
NDUFC1-202ENST00000394225 TRIM52Q96A61 297 aa22.65■■□□□ 1.22
NDUFC1-202ENST00000394225 RAB3GAP2Q9H2M9 1393 aa22.64■■□□□ 1.22
NDUFC1-202ENST00000394225 RPRD2Q5VT52 1461 aaKnown RBP22.64■■□□□ 1.21
NDUFC1-202ENST00000394225 PREX1Q8TCU6 1659 aa22.62■■□□□ 1.21
NDUFC1-202ENST00000394225 ERVK-7P63135 1459 aa22.61■■□□□ 1.21
NDUFC1-202ENST00000394225 SPATA31D1Q6ZQQ2 1576 aa22.61■■□□□ 1.21
NDUFC1-202ENST00000394225 TNRQ92752 1358 aa22.61■■□□□ 1.21
NDUFC1-202ENST00000394225 HRCP23327 699 aa22.6■■□□□ 1.21
NDUFC1-202ENST00000394225 FBXO31Q5XUX0 539 aaPredicted RBP22.6■■□□□ 1.21
NDUFC1-202ENST00000394225 UHRF1BP1Q6BDS2 1440 aa22.59■■□□□ 1.21
NDUFC1-202ENST00000394225 E9PCH4 1651 aa22.58■■□□□ 1.2
NDUFC1-202ENST00000394225 MYO3AQ8NEV4 1616 aa22.57■■□□□ 1.2
NDUFC1-202ENST00000394225 SLC4A1APQ9BWU0 796 aaKnown RBP22.56■■□□□ 1.2
NDUFC1-202ENST00000394225 CFAP65Q6ZU64 1925 aaKnown RBP22.56■■□□□ 1.2
NDUFC1-202ENST00000394225 NLRP1Q9C000 1473 aa22.54■■□□□ 1.2
NDUFC1-202ENST00000394225 NOS1P29475 1434 aa22.54■■□□□ 1.2
NDUFC1-202ENST00000394225 LMTK3Q96Q04 1460 aa22.54■■□□□ 1.2
NDUFC1-202ENST00000394225 ZNF142P52746 1687 aaPredicted RBP22.52■■□□□ 1.2
NDUFC1-202ENST00000394225 CEP170BQ9Y4F5 1589 aaPredicted RBP22.5■■□□□ 1.19
NDUFC1-202ENST00000394225 A2ML1A8K2U0 1454 aa22.5■■□□□ 1.19
NDUFC1-202ENST00000394225 PKD2Q13563 968 aa22.5■■□□□ 1.19
NDUFC1-202ENST00000394225 MPHOSPH9Q99550 1183 aa22.5■■□□□ 1.19
NDUFC1-202ENST00000394225 SYNMO15061 1565 aa22.49■■□□□ 1.19
NDUFC1-202ENST00000394225 SLC52A1Q9NWF4 448 aa22.48■■□□□ 1.19
NDUFC1-202ENST00000394225 SPHKAPQ2M3C7 1700 aa22.47■■□□□ 1.19
NDUFC1-202ENST00000394225 PTPRTO14522 1441 aa22.46■■□□□ 1.19
NDUFC1-202ENST00000394225 UGGT1Q9NYU2 1555 aa22.43■■□□□ 1.18
NDUFC1-202ENST00000394225 TRPM2O94759 1503 aa22.42■■□□□ 1.18
NDUFC1-202ENST00000394225 PIK3C2BO00750 1634 aa22.42■■□□□ 1.18
NDUFC1-202ENST00000394225 IDI1Q13907 227 aa22.41■■□□□ 1.18
NDUFC1-202ENST00000394225 KDM5AP29375 1690 aaKnown RBP22.41■■□□□ 1.18
NDUFC1-202ENST00000394225 THEMISQ8N1K5 641 aaPredicted RBP22.4■■□□□ 1.18
NDUFC1-202ENST00000394225 HSPA2P54652 639 aa22.39■■□□□ 1.17
NDUFC1-202ENST00000394225 PCGF6Q9BYE7 350 aa22.39■■□□□ 1.17
NDUFC1-202ENST00000394225 STAG3Q9UJ98 1225 aa22.39■■□□□ 1.17
NDUFC1-202ENST00000394225 UBR1Q8IWV7 1749 aa22.39■■□□□ 1.17
NDUFC1-202ENST00000394225 ADGRB3O60242 1522 aa22.38■■□□□ 1.17
NDUFC1-202ENST00000394225 PLA2R1Q13018 1463 aa22.37■■□□□ 1.17
NDUFC1-202ENST00000394225 CLTCL1P53675 1640 aa22.34■■□□□ 1.17
NDUFC1-202ENST00000394225 CCDC144AA2RUR9 1427 aa22.32■■□□□ 1.16
NDUFC1-202ENST00000394225 TMEM131LA2VDJ0 1609 aa22.32■■□□□ 1.16
NDUFC1-202ENST00000394225 CHGAP10645 457 aaKnown RBP22.3■■□□□ 1.16
NDUFC1-202ENST00000394225 SLIT1O75093 1534 aa22.3■■□□□ 1.16
NDUFC1-202ENST00000394225 KIF1BO60333 1816 aa22.29■■□□□ 1.16
NDUFC1-202ENST00000394225 ARHGAP23Q9P227 1491 aa22.28■■□□□ 1.16
NDUFC1-202ENST00000394225 TMEM2Q9UHN6 1383 aa22.28■■□□□ 1.16
NDUFC1-202ENST00000394225 ANKLE2Q86XL3 938 aa22.28■■□□□ 1.16
NDUFC1-202ENST00000394225 ANKRD30BQ9BXX2 1392 aa22.27■■□□□ 1.16
NDUFC1-202ENST00000394225 POLR1AO95602 1720 aaPredicted RBP22.27■■□□□ 1.16
NDUFC1-202ENST00000394225 STRCQ7RTU9 1775 aa22.27■■□□□ 1.16
NDUFC1-202ENST00000394225 MYO5BQ9ULV0 1848 aa22.27■■□□□ 1.15
NDUFC1-202ENST00000394225 HDGFP51858 240 aaKnown RBP22.25■■□□□ 1.15
NDUFC1-202ENST00000394225 DMRT2Q9Y5R5 561 aa22.25■■□□□ 1.15
NDUFC1-202ENST00000394225 EID1Q9Y6B2 187 aa22.25■■□□□ 1.15
NDUFC1-202ENST00000394225 DHX57Q6P158 1386 aaKnown RBP22.24■■□□□ 1.15
NDUFC1-202ENST00000394225 NCKAP5LQ9HCH0 1330 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms