RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 PRG4Q92954 1404 aaPredicted RBP15.34■□□□□ 0.05
R3HDM2-203ENST00000393811 URB2Q14146 1524 aaKnown RBP15.34■□□□□ 0.05
R3HDM2-203ENST00000393811 C20orf194Q5TEA3 1177 aa15.33■□□□□ 0.04
R3HDM2-203ENST00000393811 FAM161AQ3B820 660 aa15.32■□□□□ 0.04
R3HDM2-203ENST00000393811 CCDC146Q8IYE0 955 aa15.32■□□□□ 0.04
R3HDM2-203ENST00000393811 FRAT1Q92837 279 aaPredicted RBP15.32■□□□□ 0.04
R3HDM2-203ENST00000393811 CENPQQ7L2Z9 268 aaPredicted RBP15.32■□□□□ 0.04
R3HDM2-203ENST00000393811 GOLGA2Q08379 1002 aa15.31■□□□□ 0.04
R3HDM2-203ENST00000393811 ADAMTS8Q9UP79 889 aa15.31■□□□□ 0.04
R3HDM2-203ENST00000393811 NEUROD2Q15784 382 aa15.3■□□□□ 0.04
R3HDM2-203ENST00000393811 UPF2Q9HAU5 1272 aaKnown RBP15.3■□□□□ 0.04
R3HDM2-203ENST00000393811 SLKQ9H2G2 1235 aaPredicted RBP15.3■□□□□ 0.04
R3HDM2-203ENST00000393811 GCC2Q8IWJ2 1684 aa15.3■□□□□ 0.04
R3HDM2-203ENST00000393811 SAMD9Q5K651 1589 aa15.29■□□□□ 0.04
R3HDM2-203ENST00000393811 LAMC3Q9Y6N6 1575 aa15.29■□□□□ 0.04
R3HDM2-203ENST00000393811 BECN1Q14457 450 aa15.28■□□□□ 0.04
R3HDM2-203ENST00000393811 IQGAP2Q13576 1575 aa15.28■□□□□ 0.04
R3HDM2-203ENST00000393811 FRAT2O75474 233 aaPredicted RBP15.27■□□□□ 0.04
R3HDM2-203ENST00000393811 CCDC144AA2RUR9 1427 aa15.26■□□□□ 0.03
R3HDM2-203ENST00000393811 PZPP20742 1482 aa15.25■□□□□ 0.03
R3HDM2-203ENST00000393811 LRPPRCP42704 1394 aaKnown RBP15.25■□□□□ 0.03
R3HDM2-203ENST00000393811 CAMSAP2Q08AD1 1489 aa15.24■□□□□ 0.03
R3HDM2-203ENST00000393811 SPRYD3Q8NCJ5 442 aa15.24■□□□□ 0.03
R3HDM2-203ENST00000393811 TROQ12816 1431 aaPredicted RBP15.23■□□□□ 0.03
R3HDM2-203ENST00000393811 ARHGEF11O15085 1522 aa15.23■□□□□ 0.03
R3HDM2-203ENST00000393811 TNNT2P45379 298 aaPredicted RBP15.23■□□□□ 0.03
R3HDM2-203ENST00000393811 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
R3HDM2-203ENST00000393811 APAF1O14727 1248 aa15.22■□□□□ 0.03
R3HDM2-203ENST00000393811 CDCA8Q53HL2 280 aa15.21■□□□□ 0.03
R3HDM2-203ENST00000393811 JPH4Q96JJ6 628 aa15.21■□□□□ 0.03
R3HDM2-203ENST00000393811 LRRIQ1Q96JM4 1722 aa15.21■□□□□ 0.03
R3HDM2-203ENST00000393811 C9orf84Q5VXU9 1444 aa15.19■□□□□ 0.02
R3HDM2-203ENST00000393811 RALGAPBQ86X10 1494 aa15.19■□□□□ 0.02
R3HDM2-203ENST00000393811 CARMIL2Q6F5E8 1435 aa15.18■□□□□ 0.02
R3HDM2-203ENST00000393811 WDR62O43379 1518 aa15.18■□□□□ 0.02
R3HDM2-203ENST00000393811 COG6Q9Y2V7 657 aa15.18■□□□□ 0.02
R3HDM2-203ENST00000393811 PPP2R1AP30153 589 aa15.17■□□□□ 0.02
R3HDM2-203ENST00000393811 DNMT1P26358 1616 aaKnown RBP15.17■□□□□ 0.02
R3HDM2-203ENST00000393811 BCAR3O75815 825 aa15.17■□□□□ 0.02
R3HDM2-203ENST00000393811 CHGAP10645 457 aaKnown RBP15.17■□□□□ 0.02
R3HDM2-203ENST00000393811 GZF1Q9H116 711 aaPredicted RBP15.17■□□□□ 0.02
R3HDM2-203ENST00000393811 BCORL1Q5H9F3 1711 aa15.17■□□□□ 0.02
R3HDM2-203ENST00000393811 PARD3Q8TEW0 1356 aa15.16■□□□□ 0.02
R3HDM2-203ENST00000393811 NUP153P49790 1475 aaKnown RBP15.16■□□□□ 0.02
R3HDM2-203ENST00000393811 PLB1Q6P1J6 1458 aa15.15■□□□□ 0.02
R3HDM2-203ENST00000393811 WASHC2CQ9Y4E1 1318 aa15.15■□□□□ 0.02
R3HDM2-203ENST00000393811 PER1O15534 1290 aaPredicted RBP15.15■□□□□ 0.02
R3HDM2-203ENST00000393811 CLUAP1Q96AJ1 413 aa15.14■□□□□ 0.01
R3HDM2-203ENST00000393811 GPATCH8Q9UKJ3 1502 aaKnown RBP15.14■□□□□ 0.01
R3HDM2-203ENST00000393811 ABCA5Q8WWZ7 1642 aa15.14■□□□□ 0.01
R3HDM2-203ENST00000393811 DISP3Q9P2K9 1392 aa15.14■□□□□ 0.01
R3HDM2-203ENST00000393811 DUSP27Q5VZP5 1158 aa15.13■□□□□ 0.01
R3HDM2-203ENST00000393811 BCL2L13Q9BXK5 485 aa15.13■□□□□ 0.01
R3HDM2-203ENST00000393811 PANK1Q8TE04 598 aa15.13■□□□□ 0.01
R3HDM2-203ENST00000393811 RRP7AQ9Y3A4 280 aaKnown RBP15.13■□□□□ 0.01
R3HDM2-203ENST00000393811 CENPJQ9HC77 1338 aaPredicted RBP15.13■□□□□ 0.01
R3HDM2-203ENST00000393811 C8orf34Q49A92 452 aa15.11■□□□□ 0.01
R3HDM2-203ENST00000393811 NAP1L5Q96NT1 182 aaPredicted RBP15.11■□□□□ 0.01
R3HDM2-203ENST00000393811 KIF14Q15058 1648 aa15.11■□□□□ 0.01
R3HDM2-203ENST00000393811 ERBINQ96RT1 1412 aa15.11■□□□□ 0.01
R3HDM2-203ENST00000393811 KIAA0586Q9BVV6 1533 aa15.11■□□□□ 0.01
R3HDM2-203ENST00000393811 KDM5CP41229 1560 aa15.11■□□□□ 0.01
R3HDM2-203ENST00000393811 L1TD1Q5T7N2 865 aaKnown RBP15.1■□□□□ 0.01
R3HDM2-203ENST00000393811 E9PSI1 815 aa15.1■□□□□ 0.01
R3HDM2-203ENST00000393811 HSP90AA1P07900 732 aaKnown RBP15.1■□□□□ 0.01
R3HDM2-203ENST00000393811 UHRF1BP1Q6BDS2 1440 aa15.09■□□□□ 0.01
R3HDM2-203ENST00000393811 POGKQ9P215 609 aa15.09■□□□□ 0.01
R3HDM2-203ENST00000393811 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
R3HDM2-203ENST00000393811 FTSJ3Q8IY81 847 aaKnown RBP15.09■□□□□ 0.01
R3HDM2-203ENST00000393811 SLFN5Q08AF3 891 aa15.08■□□□□ 0.01
R3HDM2-203ENST00000393811 CGNL1Q0VF96 1302 aa15.08■□□□□ 0.01
R3HDM2-203ENST00000393811 MBD5Q9P267 1494 aa15.08■□□□□ 0
R3HDM2-203ENST00000393811 MAPK8IP3Q9UPT6 1336 aa15.07■□□□□ 0
R3HDM2-203ENST00000393811 RSPH4AQ5TD94 716 aa15.07■□□□□ 0
R3HDM2-203ENST00000393811 TESK2Q96S53 571 aa15.07■□□□□ 0
R3HDM2-203ENST00000393811 SENP3Q9H4L4 574 aaPredicted RBP15.07■□□□□ 0
R3HDM2-203ENST00000393811 PLEKHH1Q9ULM0 1364 aa15.06■□□□□ 0
R3HDM2-203ENST00000393811 RSPH6AQ9H0K4 717 aa15.06■□□□□ 0
R3HDM2-203ENST00000393811 KDM2BQ8NHM5 1336 aa15.06■□□□□ 0
R3HDM2-203ENST00000393811 MORC1Q86VD1 984 aa15.06■□□□□ 0
R3HDM2-203ENST00000393811 ZNF608Q9ULD9 1512 aaPredicted RBP15.05■□□□□ 0
R3HDM2-203ENST00000393811 MFAP1P55081 439 aaKnown RBP15.05■□□□□ -0
R3HDM2-203ENST00000393811 RAPGEF6Q8TEU7 1601 aa15.05■□□□□ -0
R3HDM2-203ENST00000393811 IGHDP01880 384 aa15.05■□□□□ -0
R3HDM2-203ENST00000393811 PMFBP1Q8TBY8 1022 aa15.04■□□□□ -0
R3HDM2-203ENST00000393811 GOLGA6L3A6NEY3 463 aa15.04■□□□□ -0
R3HDM2-203ENST00000393811 PRAG1Q86YV5 1406 aa15.03■□□□□ -0
R3HDM2-203ENST00000393811 RWDD1Q9H446 243 aaPredicted RBP15.03■□□□□ -0
R3HDM2-203ENST00000393811 ARHGEF12Q9NZN5 1544 aa15.02□□□□□ -0.01
R3HDM2-203ENST00000393811 FAM43AQ8N2R8 423 aa15.02□□□□□ -0.01
R3HDM2-203ENST00000393811 GLIPR1L2Q4G1C9 344 aa15.02□□□□□ -0.01
R3HDM2-203ENST00000393811 PLEKHH2Q8IVE3 1493 aa15.02□□□□□ -0.01
R3HDM2-203ENST00000393811 CFAP53Q96M91 514 aa15.01□□□□□ -0.01
R3HDM2-203ENST00000393811 SPINK5Q9NQ38 1064 aaPredicted RBP15.01□□□□□ -0.01
R3HDM2-203ENST00000393811 DISP1Q96F81 1524 aa15.01□□□□□ -0.01
R3HDM2-203ENST00000393811 PNNQ9H307 717 aaKnown RBP15.01□□□□□ -0.01
R3HDM2-203ENST00000393811 TRIM44Q96DX7 344 aaPredicted RBP15□□□□□ -0.01
R3HDM2-203ENST00000393811 KIAA0556O60303 1618 aa15□□□□□ -0.01
R3HDM2-203ENST00000393811 POLR1AO95602 1720 aaPredicted RBP15□□□□□ -0.01
R3HDM2-203ENST00000393811 SEC24BO95487 1268 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms