RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 ROCK1Q13464 1354 aa28.52■■■□□ 2.16
NME1-203ENST00000393196 MROH2AA6NES4 1674 aa28.48■■■□□ 2.15
NME1-203ENST00000393196 WASHC2CQ9Y4E1 1318 aa28.47■■■□□ 2.15
NME1-203ENST00000393196 ZMYM3Q14202 1370 aa28.47■■■□□ 2.15
NME1-203ENST00000393196 RNF17Q9BXT8 1623 aaKnown RBP28.47■■■□□ 2.15
NME1-203ENST00000393196 PLPPR3Q6T4P5 718 aa28.46■■■□□ 2.15
NME1-203ENST00000393196 KDM5DQ9BY66 1539 aa28.46■■■□□ 2.15
NME1-203ENST00000393196 NPATQ14207 1427 aa28.43■■■□□ 2.14
NME1-203ENST00000393196 PTPRKQ15262 1439 aa28.43■■■□□ 2.14
NME1-203ENST00000393196 CEBPAP49715 358 aaPredicted RBP28.43■■■□□ 2.14
NME1-203ENST00000393196 ANKRD50Q9ULJ7 1429 aa28.43■■■□□ 2.14
NME1-203ENST00000393196 ITGAEP38570 1179 aa28.42■■■□□ 2.14
NME1-203ENST00000393196 KANK1Q14678 1352 aa28.41■■■□□ 2.14
NME1-203ENST00000393196 CLTCQ00610 1675 aaKnown RBP28.38■■■□□ 2.13
NME1-203ENST00000393196 C3P01024 1663 aa28.38■■■□□ 2.13
NME1-203ENST00000393196 PRDM15P57071 1507 aaPredicted RBP28.36■■■□□ 2.13
NME1-203ENST00000393196 ZC3H13Q5T200 1668 aaKnown RBP28.35■■■□□ 2.13
NME1-203ENST00000393196 UHRF1BP1Q6BDS2 1440 aa28.35■■■□□ 2.13
NME1-203ENST00000393196 ABCC3O15438 1527 aa28.34■■■□□ 2.13
NME1-203ENST00000393196 PZPP20742 1482 aa28.33■■■□□ 2.13
NME1-203ENST00000393196 MROH1Q8NDA8 1641 aa28.32■■■□□ 2.12
NME1-203ENST00000393196 LMTK3Q96Q04 1460 aa28.32■■■□□ 2.12
NME1-203ENST00000393196 DEPDC5O75140 1603 aa28.32■■■□□ 2.12
NME1-203ENST00000393196 SETD1BQ9UPS6 1966 aaKnown RBP28.31■■■□□ 2.12
NME1-203ENST00000393196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.3■■■□□ 2.125e-8■□□□□ 8.5
NME1-203ENST00000393196 PREX1Q8TCU6 1659 aa28.29■■■□□ 2.12
NME1-203ENST00000393196 ARHGAP31Q2M1Z3 1444 aa28.26■■■□□ 2.11
NME1-203ENST00000393196 LMTK2Q8IWU2 1503 aa28.25■■■□□ 2.11
NME1-203ENST00000393196 TNRQ92752 1358 aa28.24■■■□□ 2.11
NME1-203ENST00000393196 VWDEQ8N2E2 1590 aa28.22■■■□□ 2.11
NME1-203ENST00000393196 HFM1A2PYH4 1435 aa28.2■■■□□ 2.11
NME1-203ENST00000393196 NAIPQ13075 1403 aa28.18■■■□□ 2.1
NME1-203ENST00000393196 CAMSAP1Q5T5Y3 1602 aa28.18■■■□□ 2.1
NME1-203ENST00000393196 UNC13BO14795 1591 aa28.17■■■□□ 2.1
NME1-203ENST00000393196 FBXO31Q5XUX0 539 aaPredicted RBP28.17■■■□□ 2.1
NME1-203ENST00000393196 ERVK-7P63135 1459 aa28.15■■■□□ 2.1
NME1-203ENST00000393196 NLRP1Q9C000 1473 aa28.15■■■□□ 2.1
NME1-203ENST00000393196 CEP152O94986 1710 aa28.15■■■□□ 2.1
NME1-203ENST00000393196 HSPA2P54652 639 aa28.14■■■□□ 2.1
NME1-203ENST00000393196 SPATA31D1Q6ZQQ2 1576 aa28.14■■■□□ 2.1
NME1-203ENST00000393196 NUP155O75694 1391 aa28.13■■■□□ 2.09
NME1-203ENST00000393196 A2ML1A8K2U0 1454 aa28.13■■■□□ 2.09
NME1-203ENST00000393196 RPRD2Q5VT52 1461 aaKnown RBP28.13■■■□□ 2.09
NME1-203ENST00000393196 ACIN1Q9UKV3 1341 aaKnown RBP28.13■■■□□ 2.09
NME1-203ENST00000393196 MYO3AQ8NEV4 1616 aa28.12■■■□□ 2.09
NME1-203ENST00000393196 EFCAB6Q5THR3 1501 aa28.12■■■□□ 2.09
NME1-203ENST00000393196 GCC2Q8IWJ2 1684 aa28.1■■■□□ 2.09
NME1-203ENST00000393196 CEP170BQ9Y4F5 1589 aaPredicted RBP28.1■■■□□ 2.09
NME1-203ENST00000393196 ZNF142P52746 1687 aaPredicted RBP28.09■■■□□ 2.09
NME1-203ENST00000393196 DMRT2Q9Y5R5 561 aa28.07■■■□□ 2.08
NME1-203ENST00000393196 TET3O43151 1660 aa28.07■■■□□ 2.08
NME1-203ENST00000393196 IQGAP3Q86VI3 1631 aa28.06■■■□□ 2.08
NME1-203ENST00000393196 THEMISQ8N1K5 641 aaPredicted RBP28.04■■■□□ 2.08
NME1-203ENST00000393196 PLA2R1Q13018 1463 aa28.03■■■□□ 2.08
NME1-203ENST00000393196 NOS1P29475 1434 aa28.01■■■□□ 2.08
NME1-203ENST00000393196 SLC52A1Q9NWF4 448 aa28■■■□□ 2.07
NME1-203ENST00000393196 PKD2Q13563 968 aa27.99■■■□□ 2.07
NME1-203ENST00000393196 UGGT1Q9NYU2 1555 aa27.98■■■□□ 2.07
NME1-203ENST00000393196 TRIM52Q96A61 297 aa27.97■■■□□ 2.07
NME1-203ENST00000393196 SETD5Q9C0A6 1442 aa27.95■■■□□ 2.07
NME1-203ENST00000393196 PTPRTO14522 1441 aa27.92■■■□□ 2.06
NME1-203ENST00000393196 STAG3Q9UJ98 1225 aa27.92■■■□□ 2.06
NME1-203ENST00000393196 ANKLE2Q86XL3 938 aa27.9■■■□□ 2.06
NME1-203ENST00000393196 IDI1Q13907 227 aa27.89■■■□□ 2.06
NME1-203ENST00000393196 SYNMO15061 1565 aa27.88■■■□□ 2.05
NME1-203ENST00000393196 SLC4A1APQ9BWU0 796 aaKnown RBP27.88■■■□□ 2.05
NME1-203ENST00000393196 E9PCH4 1651 aa27.87■■■□□ 2.05
NME1-203ENST00000393196 STRCQ7RTU9 1775 aa27.85■■■□□ 2.05
NME1-203ENST00000393196 NCKAP5LQ9HCH0 1330 aa27.85■■■□□ 2.05
NME1-203ENST00000393196 CFAP65Q6ZU64 1925 aaKnown RBP27.84■■■□□ 2.05
NME1-203ENST00000393196 KDM5AP29375 1690 aaKnown RBP27.84■■■□□ 2.05
NME1-203ENST00000393196 HRCP23327 699 aa27.84■■■□□ 2.05
NME1-203ENST00000393196 EID1Q9Y6B2 187 aa27.82■■■□□ 2.04
NME1-203ENST00000393196 RAB3GAP2Q9H2M9 1393 aa27.81■■■□□ 2.04
NME1-203ENST00000393196 ADGRB3O60242 1522 aa27.81■■■□□ 2.04
NME1-203ENST00000393196 PIK3C2BO00750 1634 aa27.81■■■□□ 2.04
NME1-203ENST00000393196 UBR1Q8IWV7 1749 aa27.81■■■□□ 2.04
NME1-203ENST00000393196 SLIT1O75093 1534 aa27.8■■■□□ 2.04
NME1-203ENST00000393196 ARHGAP23Q9P227 1491 aa27.79■■■□□ 2.04
NME1-203ENST00000393196 TMEM2Q9UHN6 1383 aa27.79■■■□□ 2.04
NME1-203ENST00000393196 HDGFP51858 240 aaKnown RBP27.78■■■□□ 2.04
NME1-203ENST00000393196 MED14O60244 1454 aa27.76■■■□□ 2.04
NME1-203ENST00000393196 MPHOSPH9Q99550 1183 aa27.76■■■□□ 2.03
NME1-203ENST00000393196 SCAF11Q99590 1463 aaKnown RBP27.76■■■□□ 2.03
NME1-203ENST00000393196 TRPM2O94759 1503 aa27.74■■■□□ 2.03
NME1-203ENST00000393196 TXNDC2Q86VQ3 553 aa27.74■■■□□ 2.03
NME1-203ENST00000393196 NPHP4O75161 1426 aaPredicted RBP27.74■■■□□ 2.03
NME1-203ENST00000393196 POLR1AO95602 1720 aaPredicted RBP27.72■■■□□ 2.03
NME1-203ENST00000393196 SPHKAPQ2M3C7 1700 aa27.72■■■□□ 2.03
NME1-203ENST00000393196 CHGAP10645 457 aaKnown RBP27.71■■■□□ 2.03
NME1-203ENST00000393196 NEURL4Q96JN8 1562 aa27.7■■■□□ 2.03
NME1-203ENST00000393196 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.7■■■□□ 2.02
NME1-203ENST00000393196 TMEM131LA2VDJ0 1609 aa27.67■■■□□ 2.02
NME1-203ENST00000393196 LTKP29376 864 aa27.66■■■□□ 2.02
NME1-203ENST00000393196 RIMS2Q9UQ26 1411 aa27.64■■■□□ 2.02
NME1-203ENST00000393196 PPP1R15AO75807 674 aaPredicted RBP27.63■■■□□ 2.01
NME1-203ENST00000393196 TRIM26Q12899 539 aaPredicted RBP27.63■■■□□ 2.01
NME1-203ENST00000393196 ZFYVE9O95405 1425 aa27.63■■■□□ 2.01
NME1-203ENST00000393196 IQGAP1P46940 1657 aa27.62■■■□□ 2.01
NME1-203ENST00000393196 CCDC144AA2RUR9 1427 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms