RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 PTPRKQ15262 1439 aa24.44■■□□□ 1.5
CSHL1-204ENST00000392824 ADGRL2O95490 1459 aa24.43■■□□□ 1.5
CSHL1-204ENST00000392824 ERBINQ96RT1 1412 aa24.42■■□□□ 1.5
CSHL1-204ENST00000392824 ZMYM3Q14202 1370 aa24.41■■□□□ 1.5
CSHL1-204ENST00000392824 ROCK1Q13464 1354 aa24.4■■□□□ 1.5
CSHL1-204ENST00000392824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.38■■□□□ 1.49
CSHL1-204ENST00000392824 ANKRD50Q9ULJ7 1429 aa24.35■■□□□ 1.49
CSHL1-204ENST00000392824 EIF2AK4Q9P2K8 1649 aaKnown RBP24.34■■□□□ 1.49
CSHL1-204ENST00000392824 KANK1Q14678 1352 aa24.32■■□□□ 1.48
CSHL1-204ENST00000392824 KDM5DQ9BY66 1539 aa24.3■■□□□ 1.48
CSHL1-204ENST00000392824 FAM135AQ9P2D6 1515 aa24.3■■□□□ 1.48
CSHL1-204ENST00000392824 CLTCQ00610 1675 aaKnown RBP24.29■■□□□ 1.48
CSHL1-204ENST00000392824 RNF17Q9BXT8 1623 aaKnown RBP24.28■■□□□ 1.48
CSHL1-204ENST00000392824 MROH2AA6NES4 1674 aa24.26■■□□□ 1.47
CSHL1-204ENST00000392824 NPATQ14207 1427 aa24.26■■□□□ 1.47
CSHL1-204ENST00000392824 C3P01024 1663 aa24.25■■□□□ 1.47
CSHL1-204ENST00000392824 FBXO31Q5XUX0 539 aaPredicted RBP24.24■■□□□ 1.47
CSHL1-204ENST00000392824 ABCC3O15438 1527 aa24.23■■□□□ 1.47
CSHL1-204ENST00000392824 UHRF1BP1Q6BDS2 1440 aa24.22■■□□□ 1.47
CSHL1-204ENST00000392824 MROH1Q8NDA8 1641 aa24.21■■□□□ 1.47
CSHL1-204ENST00000392824 PRDM15P57071 1507 aaPredicted RBP24.2■■□□□ 1.47
CSHL1-204ENST00000392824 SETD1BQ9UPS6 1966 aaKnown RBP24.2■■□□□ 1.46
CSHL1-204ENST00000392824 PZPP20742 1482 aa24.19■■□□□ 1.46
CSHL1-204ENST00000392824 LMTK3Q96Q04 1460 aa24.19■■□□□ 1.46
CSHL1-204ENST00000392824 HSPA2P54652 639 aa24.18■■□□□ 1.46
CSHL1-204ENST00000392824 NAIPQ13075 1403 aa24.18■■□□□ 1.46
CSHL1-204ENST00000392824 DEPDC5O75140 1603 aa24.17■■□□□ 1.46
CSHL1-204ENST00000392824 TNRQ92752 1358 aa24.16■■□□□ 1.46
CSHL1-204ENST00000392824 ZC3H13Q5T200 1668 aaKnown RBP24.16■■□□□ 1.46
CSHL1-204ENST00000392824 NUP155O75694 1391 aa24.16■■□□□ 1.46
CSHL1-204ENST00000392824 HFM1A2PYH4 1435 aa24.15■■□□□ 1.46
CSHL1-204ENST00000392824 ARHGAP31Q2M1Z3 1444 aa24.14■■□□□ 1.45
CSHL1-204ENST00000392824 LMTK2Q8IWU2 1503 aa24.12■■□□□ 1.45
CSHL1-204ENST00000392824 PREX1Q8TCU6 1659 aa24.11■■□□□ 1.45
CSHL1-204ENST00000392824 TRIM52Q96A61 297 aa24.11■■□□□ 1.45
CSHL1-204ENST00000392824 VWDEQ8N2E2 1590 aa24.11■■□□□ 1.45
CSHL1-204ENST00000392824 CEP152O94986 1710 aa24.1■■□□□ 1.45
CSHL1-204ENST00000392824 CAMSAP1Q5T5Y3 1602 aa24.09■■□□□ 1.45
CSHL1-204ENST00000392824 UNC13BO14795 1591 aa24.07■■□□□ 1.44
CSHL1-204ENST00000392824 ERVK-7P63135 1459 aa24.07■■□□□ 1.44
CSHL1-204ENST00000392824 A2ML1A8K2U0 1454 aa24.03■■□□□ 1.44
CSHL1-204ENST00000392824 NLRP1Q9C000 1473 aa24.03■■□□□ 1.44
CSHL1-204ENST00000392824 SPATA31D1Q6ZQQ2 1576 aa24.03■■□□□ 1.44
CSHL1-204ENST00000392824 EFCAB6Q5THR3 1501 aa24.02■■□□□ 1.44
CSHL1-204ENST00000392824 THEMISQ8N1K5 641 aaPredicted RBP24.02■■□□□ 1.44
CSHL1-204ENST00000392824 GCC2Q8IWJ2 1684 aa24.02■■□□□ 1.44
CSHL1-204ENST00000392824 ACIN1Q9UKV3 1341 aaKnown RBP24.01■■□□□ 1.43
CSHL1-204ENST00000392824 SETD5Q9C0A6 1442 aa24.01■■□□□ 1.43
CSHL1-204ENST00000392824 MYO3AQ8NEV4 1616 aa24■■□□□ 1.43
CSHL1-204ENST00000392824 RPRD2Q5VT52 1461 aaKnown RBP24■■□□□ 1.43
CSHL1-204ENST00000392824 SLC52A1Q9NWF4 448 aa23.99■■□□□ 1.43
CSHL1-204ENST00000392824 STAG3Q9UJ98 1225 aa23.99■■□□□ 1.43
CSHL1-204ENST00000392824 DMRT2Q9Y5R5 561 aa23.99■■□□□ 1.43
CSHL1-204ENST00000392824 CEP170BQ9Y4F5 1589 aaPredicted RBP23.99■■□□□ 1.43
CSHL1-204ENST00000392824 SLC4A1APQ9BWU0 796 aaKnown RBP23.98■■□□□ 1.43
CSHL1-204ENST00000392824 IQGAP3Q86VI3 1631 aa23.98■■□□□ 1.43
CSHL1-204ENST00000392824 CFAP65Q6ZU64 1925 aaKnown RBP23.98■■□□□ 1.43
CSHL1-204ENST00000392824 TET3O43151 1660 aa23.97■■□□□ 1.43
CSHL1-204ENST00000392824 NOS1P29475 1434 aa23.96■■□□□ 1.43
CSHL1-204ENST00000392824 IDI1Q13907 227 aa23.96■■□□□ 1.43
CSHL1-204ENST00000392824 PKD2Q13563 968 aa23.94■■□□□ 1.42
CSHL1-204ENST00000392824 NCKAP5LQ9HCH0 1330 aa23.93■■□□□ 1.42
CSHL1-204ENST00000392824 UGGT1Q9NYU2 1555 aa23.93■■□□□ 1.42
CSHL1-204ENST00000392824 ANKLE2Q86XL3 938 aa23.92■■□□□ 1.42
CSHL1-204ENST00000392824 ZNF142P52746 1687 aaPredicted RBP23.92■■□□□ 1.42
CSHL1-204ENST00000392824 RAB3GAP2Q9H2M9 1393 aa23.91■■□□□ 1.42
CSHL1-204ENST00000392824 PLA2R1Q13018 1463 aa23.89■■□□□ 1.42
CSHL1-204ENST00000392824 MPHOSPH9Q99550 1183 aa23.88■■□□□ 1.41
CSHL1-204ENST00000392824 CHGAP10645 457 aaKnown RBP23.87■■□□□ 1.41
CSHL1-204ENST00000392824 HRCP23327 699 aa23.87■■□□□ 1.41
CSHL1-204ENST00000392824 E9PCH4 1651 aa23.86■■□□□ 1.41
CSHL1-204ENST00000392824 SYNMO15061 1565 aa23.86■■□□□ 1.41
CSHL1-204ENST00000392824 EID1Q9Y6B2 187 aa23.85■■□□□ 1.41
CSHL1-204ENST00000392824 TRIM26Q12899 539 aaPredicted RBP23.83■■□□□ 1.41
CSHL1-204ENST00000392824 PTPRTO14522 1441 aa23.83■■□□□ 1.4
CSHL1-204ENST00000392824 TXNDC2Q86VQ3 553 aa23.82■■□□□ 1.4
CSHL1-204ENST00000392824 FOXD1Q16676 465 aa23.81■■□□□ 1.4
CSHL1-204ENST00000392824 STRCQ7RTU9 1775 aa23.8■■□□□ 1.4
CSHL1-204ENST00000392824 HDGFP51858 240 aaKnown RBP23.8■■□□□ 1.4
CSHL1-204ENST00000392824 PIK3C2BO00750 1634 aa23.8■■□□□ 1.4
CSHL1-204ENST00000392824 TMEM2Q9UHN6 1383 aa23.79■■□□□ 1.4
CSHL1-204ENST00000392824 UBR1Q8IWV7 1749 aa23.77■■□□□ 1.4
CSHL1-204ENST00000392824 LTKP29376 864 aa23.77■■□□□ 1.4
CSHL1-204ENST00000392824 ADGRB3O60242 1522 aa23.75■■□□□ 1.39
CSHL1-204ENST00000392824 ARHGAP23Q9P227 1491 aa23.74■■□□□ 1.39
CSHL1-204ENST00000392824 SLIT1O75093 1534 aa23.74■■□□□ 1.39
CSHL1-204ENST00000392824 ZNF326Q5BKZ1 582 aaKnown RBP23.73■■□□□ 1.39
CSHL1-204ENST00000392824 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.73■■□□□ 1.39
CSHL1-204ENST00000392824 NPHP4O75161 1426 aaPredicted RBP23.73■■□□□ 1.39
CSHL1-204ENST00000392824 PPP1R15AO75807 674 aaPredicted RBP23.72■■□□□ 1.39
CSHL1-204ENST00000392824 BCANQ96GW7 911 aa23.72■■□□□ 1.39
CSHL1-204ENST00000392824 SCAF11Q99590 1463 aaKnown RBP23.72■■□□□ 1.39
CSHL1-204ENST00000392824 KDM5AP29375 1690 aaKnown RBP23.71■■□□□ 1.39
CSHL1-204ENST00000392824 SPHKAPQ2M3C7 1700 aa23.7■■□□□ 1.39
CSHL1-204ENST00000392824 TRPM2O94759 1503 aa23.7■■□□□ 1.38
CSHL1-204ENST00000392824 MED14O60244 1454 aa23.7■■□□□ 1.38
CSHL1-204ENST00000392824 RIMS2Q9UQ26 1411 aa23.68■■□□□ 1.38
CSHL1-204ENST00000392824 TMEM131LA2VDJ0 1609 aa23.67■■□□□ 1.38
CSHL1-204ENST00000392824 CCDC144AA2RUR9 1427 aa23.67■■□□□ 1.38
CSHL1-204ENST00000392824 NUTM2DQ5VT03 806 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms