RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 TRIM26Q12899 539 aaPredicted RBP38.19■■■■□ 3.7
HOMER3-202ENST00000392351 MADDQ8WXG6 1647 aa38.19■■■■□ 3.7
HOMER3-202ENST00000392351 DEPDC5O75140 1603 aa38.17■■■■□ 3.7
HOMER3-202ENST00000392351 MROH1Q8NDA8 1641 aa38.16■■■■□ 3.7
HOMER3-202ENST00000392351 KDM4FA0A1W2PPD8 638 aa38.12■■■■□ 3.69
HOMER3-202ENST00000392351 PRDM15P57071 1507 aaPredicted RBP38.12■■■■□ 3.69
HOMER3-202ENST00000392351 RIMS1Q86UR5 1692 aaKnown RBP38.11■■■■□ 3.69
HOMER3-202ENST00000392351 CLTCQ00610 1675 aaKnown RBP38.08■■■■□ 3.69
HOMER3-202ENST00000392351 UNC13BO14795 1591 aa38.08■■■■□ 3.69
HOMER3-202ENST00000392351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.06■■■■□ 3.68
HOMER3-202ENST00000392351 ESF1Q9H501 851 aaKnown RBP38.06■■■■□ 3.68
HOMER3-202ENST00000392351 PPP6R1Q9UPN7 881 aa38.06■■■■□ 3.68
HOMER3-202ENST00000392351 KDM5DQ9BY66 1539 aa38.05■■■■□ 3.68
HOMER3-202ENST00000392351 FAM135AQ9P2D6 1515 aa38.04■■■■□ 3.68
HOMER3-202ENST00000392351 SETD5Q9C0A6 1442 aa38.04■■■■□ 3.68
HOMER3-202ENST00000392351 CEP152O94986 1710 aa38.04■■■■□ 3.68
HOMER3-202ENST00000392351 ZC3H13Q5T200 1668 aaKnown RBP38.03■■■■□ 3.68
HOMER3-202ENST00000392351 CNTLNQ9NXG0 1405 aa38.01■■■■□ 3.68
HOMER3-202ENST00000392351 WASHC2CQ9Y4E1 1318 aa38.01■■■■□ 3.67
HOMER3-202ENST00000392351 KANK1Q14678 1352 aa38.01■■■■□ 3.67
HOMER3-202ENST00000392351 ABCC3O15438 1527 aa38■■■■□ 3.67
HOMER3-202ENST00000392351 MROH2AA6NES4 1674 aa38■■■■□ 3.67
HOMER3-202ENST00000392351 VWDEQ8N2E2 1590 aa37.99■■■■□ 3.67
HOMER3-202ENST00000392351 PTPRMP28827 1452 aa37.94■■■■□ 3.66
HOMER3-202ENST00000392351 RAB3GAP2Q9H2M9 1393 aa37.94■■■■□ 3.66
HOMER3-202ENST00000392351 C3P01024 1663 aa37.93■■■■□ 3.66
HOMER3-202ENST00000392351 IQGAP3Q86VI3 1631 aa37.93■■■■□ 3.66
HOMER3-202ENST00000392351 CAMSAP1Q5T5Y3 1602 aa37.92■■■■□ 3.66
HOMER3-202ENST00000392351 NUP155O75694 1391 aa37.92■■■■□ 3.66
HOMER3-202ENST00000392351 LMTK2Q8IWU2 1503 aa37.88■■■■□ 3.65
HOMER3-202ENST00000392351 ZMYM3Q14202 1370 aa37.88■■■■□ 3.65
HOMER3-202ENST00000392351 TRIM52Q96A61 297 aa37.86■■■■□ 3.65
HOMER3-202ENST00000392351 PLPPR3Q6T4P5 718 aa37.85■■■■□ 3.65
HOMER3-202ENST00000392351 TET3O43151 1660 aa37.85■■■■□ 3.65
HOMER3-202ENST00000392351 CEBPAP49715 358 aaPredicted RBP37.83■■■■□ 3.65
HOMER3-202ENST00000392351 EFCAB6Q5THR3 1501 aa37.81■■■■□ 3.64
HOMER3-202ENST00000392351 CFAP65Q6ZU64 1925 aaKnown RBP37.79■■■■□ 3.64
HOMER3-202ENST00000392351 PCGF6Q9BYE7 350 aa37.78■■■■□ 3.64
HOMER3-202ENST00000392351 PZPP20742 1482 aa37.78■■■■□ 3.64
HOMER3-202ENST00000392351 ACIN1Q9UKV3 1341 aaKnown RBP37.76■■■■□ 3.64
HOMER3-202ENST00000392351 ARHGAP31Q2M1Z3 1444 aa37.74■■■■□ 3.63
HOMER3-202ENST00000392351 HRCP23327 699 aa37.74■■■■□ 3.63
HOMER3-202ENST00000392351 NPATQ14207 1427 aa37.74■■■■□ 3.63
HOMER3-202ENST00000392351 E9PCH4 1651 aa37.74■■■■□ 3.63
HOMER3-202ENST00000392351 PREX1Q8TCU6 1659 aa37.69■■■■□ 3.62
HOMER3-202ENST00000392351 FBXO31Q5XUX0 539 aaPredicted RBP37.68■■■■□ 3.62
HOMER3-202ENST00000392351 SLC4A1APQ9BWU0 796 aaKnown RBP37.68■■■■□ 3.62
HOMER3-202ENST00000392351 RPRD2Q5VT52 1461 aaKnown RBP37.67■■■■□ 3.62
HOMER3-202ENST00000392351 ERVK-7P63135 1459 aa37.65■■■■□ 3.62
HOMER3-202ENST00000392351 SETD1BQ9UPS6 1966 aaKnown RBP37.64■■■■□ 3.62
HOMER3-202ENST00000392351 SPATA31D1Q6ZQQ2 1576 aa37.64■■■■□ 3.62
HOMER3-202ENST00000392351 MPHOSPH9Q99550 1183 aa37.61■■■■□ 3.61
HOMER3-202ENST00000392351 PKD2Q13563 968 aa37.59■■■■□ 3.61
HOMER3-202ENST00000392351 TNRQ92752 1358 aa37.57■■■■□ 3.6
HOMER3-202ENST00000392351 SPHKAPQ2M3C7 1700 aa37.55■■■■□ 3.6
HOMER3-202ENST00000392351 MYO3AQ8NEV4 1616 aa37.55■■■■□ 3.6
HOMER3-202ENST00000392351 NOS1P29475 1434 aa37.54■■■■□ 3.6
HOMER3-202ENST00000392351 SYNMO15061 1565 aa37.53■■■■□ 3.6
HOMER3-202ENST00000392351 FOXD1Q16676 465 aa37.49■■■■□ 3.59
HOMER3-202ENST00000392351 UHRF1BP1Q6BDS2 1440 aa37.47■■■■□ 3.59
HOMER3-202ENST00000392351 ZNF142P52746 1687 aaPredicted RBP37.44■■■■□ 3.58
HOMER3-202ENST00000392351 PTPRTO14522 1441 aa37.44■■■■□ 3.58
HOMER3-202ENST00000392351 NLRP1Q9C000 1473 aa37.43■■■■□ 3.58
HOMER3-202ENST00000392351 TRPM2O94759 1503 aa37.42■■■■□ 3.58
HOMER3-202ENST00000392351 CEP170BQ9Y4F5 1589 aaPredicted RBP37.42■■■■□ 3.58
HOMER3-202ENST00000392351 UGGT1Q9NYU2 1555 aa37.41■■■■□ 3.58
HOMER3-202ENST00000392351 PIK3C2BO00750 1634 aa37.4■■■■□ 3.58
HOMER3-202ENST00000392351 PLA2R1Q13018 1463 aa37.39■■■■□ 3.58
HOMER3-202ENST00000392351 LMTK3Q96Q04 1460 aa37.39■■■■□ 3.58
HOMER3-202ENST00000392351 A2ML1A8K2U0 1454 aa37.37■■■■□ 3.57
HOMER3-202ENST00000392351 SLC52A1Q9NWF4 448 aa37.35■■■■□ 3.57
HOMER3-202ENST00000392351 IDI1Q13907 227 aa37.34■■■■□ 3.57
HOMER3-202ENST00000392351 CLTCL1P53675 1640 aa37.34■■■■□ 3.57
HOMER3-202ENST00000392351 UBR1Q8IWV7 1749 aa37.31■■■■□ 3.56
HOMER3-202ENST00000392351 DHX57Q6P158 1386 aaKnown RBP37.31■■■■□ 3.56
HOMER3-202ENST00000392351 KDM5AP29375 1690 aaKnown RBP37.27■■■■□ 3.56
HOMER3-202ENST00000392351 MYO5BQ9ULV0 1848 aa37.27■■■■□ 3.56
HOMER3-202ENST00000392351 ADGRB3O60242 1522 aa37.26■■■■□ 3.56
HOMER3-202ENST00000392351 ANKRD30BQ9BXX2 1392 aa37.25■■■■□ 3.55
HOMER3-202ENST00000392351 KIF1BO60333 1816 aa37.25■■■■□ 3.55
HOMER3-202ENST00000392351 CCDC144AA2RUR9 1427 aa37.25■■■■□ 3.55
HOMER3-202ENST00000392351 TMEM131LA2VDJ0 1609 aa37.23■■■■□ 3.55
HOMER3-202ENST00000392351 STAG3Q9UJ98 1225 aa37.23■■■■□ 3.55
HOMER3-202ENST00000392351 HSPA2P54652 639 aa37.21■■■■□ 3.55
HOMER3-202ENST00000392351 CHGAP10645 457 aaKnown RBP37.19■■■■□ 3.54
HOMER3-202ENST00000392351 THEMISQ8N1K5 641 aaPredicted RBP37.17■■■■□ 3.54
HOMER3-202ENST00000392351 SLIT1O75093 1534 aa37.07■■■■□ 3.52
HOMER3-202ENST00000392351 TMEM2Q9UHN6 1383 aa37.06■■■■□ 3.52
HOMER3-202ENST00000392351 ARHGAP23Q9P227 1491 aa37.05■■■■□ 3.52
HOMER3-202ENST00000392351 POLR1AO95602 1720 aaPredicted RBP37.05■■■■□ 3.52
HOMER3-202ENST00000392351 STRCQ7RTU9 1775 aa37.04■■■■□ 3.52
HOMER3-202ENST00000392351 ZNF326Q5BKZ1 582 aaKnown RBP37.03■■■■□ 3.52
HOMER3-202ENST00000392351 SPATA31E1Q6ZUB1 1445 aa37.03■■■■□ 3.52
HOMER3-202ENST00000392351 NEURL4Q96JN8 1562 aa37.01■■■■□ 3.52
HOMER3-202ENST00000392351 ZFYVE9O95405 1425 aa36.98■■■■□ 3.51
HOMER3-202ENST00000392351 RIMS2Q9UQ26 1411 aa36.98■■■■□ 3.51
HOMER3-202ENST00000392351 RGL3Q3MIN7 710 aa36.96■■■■□ 3.51
HOMER3-202ENST00000392351 ANKLE2Q86XL3 938 aa36.96■■■■□ 3.51
HOMER3-202ENST00000392351 SIN3AQ96ST3 1273 aa36.95■■■■□ 3.51
HOMER3-202ENST00000392351 SCAF11Q99590 1463 aaKnown RBP36.95■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms