RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 TRIM26Q12899 539 aaPredicted RBP22.41■■□□□ 1.18
SUMO1-203ENST00000392246 AEBP2Q6ZN18 517 aaPredicted RBP22.41■■□□□ 1.18
SUMO1-203ENST00000392246 FER1L4A9Z1Z3 1794 aa22.4■■□□□ 1.18
SUMO1-203ENST00000392246 ESF1Q9H501 851 aaKnown RBP22.4■■□□□ 1.18
SUMO1-203ENST00000392246 MADDQ8WXG6 1647 aa22.4■■□□□ 1.18
SUMO1-203ENST00000392246 DEPDC5O75140 1603 aa22.38■■□□□ 1.17
SUMO1-203ENST00000392246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.36■■□□□ 1.17
SUMO1-203ENST00000392246 MROH1Q8NDA8 1641 aa22.36■■□□□ 1.17
SUMO1-203ENST00000392246 CNTLNQ9NXG0 1405 aa22.35■■□□□ 1.17
SUMO1-203ENST00000392246 RIMS1Q86UR5 1692 aaKnown RBP22.35■■□□□ 1.17
SUMO1-203ENST00000392246 WASHC2CQ9Y4E1 1318 aa22.35■■□□□ 1.17
SUMO1-203ENST00000392246 FAM135AQ9P2D6 1515 aa22.35■■□□□ 1.17
SUMO1-203ENST00000392246 PRDM15P57071 1507 aaPredicted RBP22.34■■□□□ 1.17
SUMO1-203ENST00000392246 KANK1Q14678 1352 aa22.34■■□□□ 1.17
SUMO1-203ENST00000392246 SETD5Q9C0A6 1442 aa22.33■■□□□ 1.17
SUMO1-203ENST00000392246 CLTCQ00610 1675 aaKnown RBP22.33■■□□□ 1.16
SUMO1-203ENST00000392246 KDM5DQ9BY66 1539 aa22.32■■□□□ 1.16
SUMO1-203ENST00000392246 UNC13BO14795 1591 aa22.31■■□□□ 1.16
SUMO1-203ENST00000392246 ZC3H13Q5T200 1668 aaKnown RBP22.3■■□□□ 1.16
SUMO1-203ENST00000392246 PTPRMP28827 1452 aa22.3■■□□□ 1.16
SUMO1-203ENST00000392246 MROH2AA6NES4 1674 aa22.29■■□□□ 1.16
SUMO1-203ENST00000392246 ABCC3O15438 1527 aa22.28■■□□□ 1.16
SUMO1-203ENST00000392246 ZMYM3Q14202 1370 aa22.28■■□□□ 1.16
SUMO1-203ENST00000392246 VWDEQ8N2E2 1590 aa22.28■■□□□ 1.16
SUMO1-203ENST00000392246 CEP152O94986 1710 aa22.28■■□□□ 1.16
SUMO1-203ENST00000392246 NUP155O75694 1391 aa22.27■■□□□ 1.15
SUMO1-203ENST00000392246 ACIN1Q9UKV3 1341 aaKnown RBP22.26■■□□□ 1.15
SUMO1-203ENST00000392246 C3P01024 1663 aa22.24■■□□□ 1.15
SUMO1-203ENST00000392246 RAB3GAP2Q9H2M9 1393 aa22.24■■□□□ 1.15
SUMO1-203ENST00000392246 TRIM52Q96A61 297 aa22.24■■□□□ 1.15
SUMO1-203ENST00000392246 LMTK2Q8IWU2 1503 aa22.24■■□□□ 1.15
SUMO1-203ENST00000392246 IQGAP3Q86VI3 1631 aa22.23■■□□□ 1.15
SUMO1-203ENST00000392246 CEBPAP49715 358 aaPredicted RBP22.23■■□□□ 1.15
SUMO1-203ENST00000392246 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
SUMO1-203ENST00000392246 CAMSAP1Q5T5Y3 1602 aa22.22■■□□□ 1.15
SUMO1-203ENST00000392246 HRCP23327 699 aa22.21■■□□□ 1.15
SUMO1-203ENST00000392246 TET3O43151 1660 aa22.19■■□□□ 1.14
SUMO1-203ENST00000392246 ARHGAP31Q2M1Z3 1444 aa22.18■■□□□ 1.14
SUMO1-203ENST00000392246 PZPP20742 1482 aa22.18■■□□□ 1.14
SUMO1-203ENST00000392246 CFAP65Q6ZU64 1925 aaKnown RBP22.17■■□□□ 1.14
SUMO1-203ENST00000392246 EFCAB6Q5THR3 1501 aa22.16■■□□□ 1.14
SUMO1-203ENST00000392246 SETD1BQ9UPS6 1966 aaKnown RBP22.16■■□□□ 1.14
SUMO1-203ENST00000392246 NPATQ14207 1427 aa22.14■■□□□ 1.14
SUMO1-203ENST00000392246 PCGF6Q9BYE7 350 aa22.14■■□□□ 1.13
SUMO1-203ENST00000392246 FBXO31Q5XUX0 539 aaPredicted RBP22.13■■□□□ 1.13
SUMO1-203ENST00000392246 SLC4A1APQ9BWU0 796 aaKnown RBP22.13■■□□□ 1.13
SUMO1-203ENST00000392246 RPRD2Q5VT52 1461 aaKnown RBP22.12■■□□□ 1.13
SUMO1-203ENST00000392246 E9PCH4 1651 aa22.11■■□□□ 1.13
SUMO1-203ENST00000392246 MPHOSPH9Q99550 1183 aa22.1■■□□□ 1.13
SUMO1-203ENST00000392246 PREX1Q8TCU6 1659 aa22.1■■□□□ 1.13
SUMO1-203ENST00000392246 ERVK-7P63135 1459 aa22.09■■□□□ 1.13
SUMO1-203ENST00000392246 SPATA31D1Q6ZQQ2 1576 aa22.08■■□□□ 1.13
SUMO1-203ENST00000392246 PKD2Q13563 968 aa22.07■■□□□ 1.12
SUMO1-203ENST00000392246 TNRQ92752 1358 aa22.07■■□□□ 1.12
SUMO1-203ENST00000392246 NOS1P29475 1434 aa22.05■■□□□ 1.12
SUMO1-203ENST00000392246 UHRF1BP1Q6BDS2 1440 aa22.02■■□□□ 1.11
SUMO1-203ENST00000392246 MYO3AQ8NEV4 1616 aa22■■□□□ 1.11
SUMO1-203ENST00000392246 SPHKAPQ2M3C7 1700 aa22■■□□□ 1.11
SUMO1-203ENST00000392246 PTPRTO14522 1441 aa21.99■■□□□ 1.11
SUMO1-203ENST00000392246 NLRP1Q9C000 1473 aa21.99■■□□□ 1.11
SUMO1-203ENST00000392246 SYNMO15061 1565 aa21.99■■□□□ 1.11
SUMO1-203ENST00000392246 SLC52A1Q9NWF4 448 aa21.99■■□□□ 1.11
SUMO1-203ENST00000392246 FOXD1Q16676 465 aa21.98■■□□□ 1.11
SUMO1-203ENST00000392246 A2ML1A8K2U0 1454 aa21.96■■□□□ 1.11
SUMO1-203ENST00000392246 IDI1Q13907 227 aa21.96■■□□□ 1.11
SUMO1-203ENST00000392246 ZNF142P52746 1687 aaPredicted RBP21.95■■□□□ 1.1
SUMO1-203ENST00000392246 CEP170BQ9Y4F5 1589 aaPredicted RBP21.95■■□□□ 1.1
SUMO1-203ENST00000392246 LMTK3Q96Q04 1460 aa21.95■■□□□ 1.1
SUMO1-203ENST00000392246 TRPM2O94759 1503 aa21.93■■□□□ 1.1
SUMO1-203ENST00000392246 PLA2R1Q13018 1463 aa21.93■■□□□ 1.1
SUMO1-203ENST00000392246 PIK3C2BO00750 1634 aa21.92■■□□□ 1.1
SUMO1-203ENST00000392246 UGGT1Q9NYU2 1555 aa21.9■■□□□ 1.1
SUMO1-203ENST00000392246 STAG3Q9UJ98 1225 aa21.9■■□□□ 1.1
SUMO1-203ENST00000392246 THEMISQ8N1K5 641 aaPredicted RBP21.89■■□□□ 1.09
SUMO1-203ENST00000392246 KDM5AP29375 1690 aaKnown RBP21.88■■□□□ 1.09
SUMO1-203ENST00000392246 UBR1Q8IWV7 1749 aa21.88■■□□□ 1.09
SUMO1-203ENST00000392246 CLTCL1P53675 1640 aa21.87■■□□□ 1.09
SUMO1-203ENST00000392246 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
SUMO1-203ENST00000392246 ANKRD30BQ9BXX2 1392 aa21.87■■□□□ 1.09
SUMO1-203ENST00000392246 HSPA2P54652 639 aa21.86■■□□□ 1.09
SUMO1-203ENST00000392246 CCDC144AA2RUR9 1427 aa21.86■■□□□ 1.09
SUMO1-203ENST00000392246 ADGRB3O60242 1522 aa21.85■■□□□ 1.09
SUMO1-203ENST00000392246 CHGAP10645 457 aaKnown RBP21.85■■□□□ 1.09
SUMO1-203ENST00000392246 KIF1BO60333 1816 aa21.85■■□□□ 1.09
SUMO1-203ENST00000392246 TMEM131LA2VDJ0 1609 aa21.84■■□□□ 1.09
SUMO1-203ENST00000392246 MYO5BQ9ULV0 1848 aa21.83■■□□□ 1.08
SUMO1-203ENST00000392246 TMEM2Q9UHN6 1383 aa21.78■■□□□ 1.08
SUMO1-203ENST00000392246 SLIT1O75093 1534 aa21.77■■□□□ 1.08
SUMO1-203ENST00000392246 ANKLE2Q86XL3 938 aa21.76■■□□□ 1.07
SUMO1-203ENST00000392246 ARHGAP23Q9P227 1491 aa21.76■■□□□ 1.07
SUMO1-203ENST00000392246 ZNF326Q5BKZ1 582 aaKnown RBP21.75■■□□□ 1.07
SUMO1-203ENST00000392246 HDGFP51858 240 aaKnown RBP21.75■■□□□ 1.07
SUMO1-203ENST00000392246 EID1Q9Y6B2 187 aa21.75■■□□□ 1.07
SUMO1-203ENST00000392246 STRCQ7RTU9 1775 aa21.73■■□□□ 1.07
SUMO1-203ENST00000392246 NEURL4Q96JN8 1562 aa21.73■■□□□ 1.07
SUMO1-203ENST00000392246 TXNDC2Q86VQ3 553 aa21.73■■□□□ 1.07
SUMO1-203ENST00000392246 SPATA31E1Q6ZUB1 1445 aa21.72■■□□□ 1.07
SUMO1-203ENST00000392246 NCKAP5LQ9HCH0 1330 aa21.72■■□□□ 1.07
SUMO1-203ENST00000392246 RIMS2Q9UQ26 1411 aa21.72■■□□□ 1.07
SUMO1-203ENST00000392246 POLR1AO95602 1720 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms