RNA–Protein interactions for RNA: ENST00000392245.5

SUMO1-202, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUMO1, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-202ENST00000392245 CCDC18Q5T9S5 1454 aa19.62■□□□□ 0.73
SUMO1-202ENST00000392245 NEURL4Q96JN8 1562 aa19.61■□□□□ 0.73
SUMO1-202ENST00000392245 A2ML1A8K2U0 1454 aa19.61■□□□□ 0.73
SUMO1-202ENST00000392245 GPATCH8Q9UKJ3 1502 aaKnown RBP19.61■□□□□ 0.73
SUMO1-202ENST00000392245 CASKIN1Q8WXD9 1431 aa19.6■□□□□ 0.73
SUMO1-202ENST00000392245 CPS1P31327 1500 aa19.6■□□□□ 0.73
SUMO1-202ENST00000392245 SHANK2Q9UPX8 1470 aa19.6■□□□□ 0.73
SUMO1-202ENST00000392245 ALKQ9UM73 1620 aa19.59■□□□□ 0.73
SUMO1-202ENST00000392245 ADGBQ8N7X0 1667 aa19.57■□□□□ 0.72
SUMO1-202ENST00000392245 NCBP3Q53F19 620 aaKnown RBP19.57■□□□□ 0.72
SUMO1-202ENST00000392245 VWDEQ8N2E2 1590 aa19.54■□□□□ 0.72
SUMO1-202ENST00000392245 KIAA1107Q9UPP5 1409 aa19.54■□□□□ 0.72
SUMO1-202ENST00000392245 FBXO31Q5XUX0 539 aaPredicted RBP19.54■□□□□ 0.72
SUMO1-202ENST00000392245 CFDP1Q9UEE9 299 aaPredicted RBP19.51■□□□□ 0.71
SUMO1-202ENST00000392245 STRCP1A6NGW2 1772 aa19.51■□□□□ 0.71
SUMO1-202ENST00000392245 PLEKHH2Q8IVE3 1493 aa19.5■□□□□ 0.71
SUMO1-202ENST00000392245 TNRQ92752 1358 aa19.5■□□□□ 0.71
SUMO1-202ENST00000392245 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.49■□□□□ 0.711e-7■■■■■ 38.4
SUMO1-202ENST00000392245 ANKLE2Q86XL3 938 aa19.48■□□□□ 0.71
SUMO1-202ENST00000392245 ZNF644Q9H582 1327 aaPredicted RBP19.47■□□□□ 0.71
SUMO1-202ENST00000392245 FYCO1Q9BQS8 1478 aa19.47■□□□□ 0.71
SUMO1-202ENST00000392245 CCNB3Q8WWL7 1395 aa19.45■□□□□ 0.7
SUMO1-202ENST00000392245 RGS17Q9UGC6 210 aaPredicted RBP19.45■□□□□ 0.7
SUMO1-202ENST00000392245 NPHP4O75161 1426 aaPredicted RBP19.44■□□□□ 0.7
SUMO1-202ENST00000392245 MED14O60244 1454 aa19.43■□□□□ 0.7
SUMO1-202ENST00000392245 PZPP20742 1482 aa19.43■□□□□ 0.7
SUMO1-202ENST00000392245 DEPDC5O75140 1603 aa19.43■□□□□ 0.7
SUMO1-202ENST00000392245 DHX29Q7Z478 1369 aaKnown RBP19.43■□□□□ 0.7
SUMO1-202ENST00000392245 IQGAP1P46940 1657 aa19.43■□□□□ 0.7
SUMO1-202ENST00000392245 KIF3BO15066 747 aa19.42■□□□□ 0.7
SUMO1-202ENST00000392245 CACNB1Q02641 598 aaPredicted RBP19.42■□□□□ 0.7
SUMO1-202ENST00000392245 THEMISQ8N1K5 641 aaPredicted RBP19.42■□□□□ 0.7
SUMO1-202ENST00000392245 MBD5Q9P267 1494 aa19.41■□□□□ 0.7
SUMO1-202ENST00000392245 LRRC7Q96NW7 1537 aa19.41■□□□□ 0.7
SUMO1-202ENST00000392245 UGGT1Q9NYU2 1555 aa19.4■□□□□ 0.7
SUMO1-202ENST00000392245 RTEL1-TNFRSF6BF6WH68 1400 aa19.39■□□□□ 0.69
SUMO1-202ENST00000392245 MIA2Q96PC5 1412 aa19.39■□□□□ 0.69
SUMO1-202ENST00000392245 KDM5DQ9BY66 1539 aa19.39■□□□□ 0.69
SUMO1-202ENST00000392245 TIAM1Q13009 1591 aa19.38■□□□□ 0.69
SUMO1-202ENST00000392245 RNF17Q9BXT8 1623 aaKnown RBP19.38■□□□□ 0.69
SUMO1-202ENST00000392245 FAM135AQ9P2D6 1515 aa19.37■□□□□ 0.69
SUMO1-202ENST00000392245 NLRP1Q9C000 1473 aa19.37■□□□□ 0.69
SUMO1-202ENST00000392245 WASHC2CQ9Y4E1 1318 aa19.37■□□□□ 0.69
SUMO1-202ENST00000392245 CFAP65Q6ZU64 1925 aaKnown RBP19.37■□□□□ 0.69
SUMO1-202ENST00000392245 XIRP1Q702N8 1843 aaKnown RBP19.35■□□□□ 0.69
SUMO1-202ENST00000392245 SYNMO15061 1565 aa19.35■□□□□ 0.69
SUMO1-202ENST00000392245 MTUS2Q5JR59 1369 aa19.34■□□□□ 0.69
SUMO1-202ENST00000392245 ZC3H13Q5T200 1668 aaKnown RBP19.33■□□□□ 0.69
SUMO1-202ENST00000392245 POTEAQ6S8J7 498 aa19.31■□□□□ 0.68
SUMO1-202ENST00000392245 RNF39Q9H2S5 420 aa19.31■□□□□ 0.68
SUMO1-202ENST00000392245 CCDC141Q6ZP82 1450 aa19.27■□□□□ 0.67
SUMO1-202ENST00000392245 UBR1Q8IWV7 1749 aa19.26■□□□□ 0.67
SUMO1-202ENST00000392245 SETD1AO15047 1707 aaKnown RBP19.25■□□□□ 0.67
SUMO1-202ENST00000392245 NPM3O75607 178 aaKnown RBP19.24■□□□□ 0.67
SUMO1-202ENST00000392245 EHBP1L1Q8N3D4 1523 aa19.24■□□□□ 0.67
SUMO1-202ENST00000392245 ABCC3O15438 1527 aa19.23■□□□□ 0.67
SUMO1-202ENST00000392245 CAMSAP2Q08AD1 1489 aa19.22■□□□□ 0.67
SUMO1-202ENST00000392245 LTKP29376 864 aa19.22■□□□□ 0.67
SUMO1-202ENST00000392245 CEP162Q5TB80 1403 aa19.22■□□□□ 0.67
SUMO1-202ENST00000392245 ERVK-7P63135 1459 aa19.22■□□□□ 0.67
SUMO1-202ENST00000392245 CEP152O94986 1710 aa19.21■□□□□ 0.67
SUMO1-202ENST00000392245 NCOA2Q15596 1464 aa19.21■□□□□ 0.67
SUMO1-202ENST00000392245 SCAF11Q99590 1463 aaKnown RBP19.2■□□□□ 0.66
SUMO1-202ENST00000392245 FAM135BQ49AJ0 1406 aa19.19■□□□□ 0.66
SUMO1-202ENST00000392245 RSPH4AQ5TD94 716 aa19.18■□□□□ 0.66
SUMO1-202ENST00000392245 TXNDC2Q86VQ3 553 aa19.18■□□□□ 0.66
SUMO1-202ENST00000392245 ROBO1Q9Y6N7 1651 aa19.17■□□□□ 0.66
SUMO1-202ENST00000392245 ARHGAP23Q9P227 1491 aa19.16■□□□□ 0.66
SUMO1-202ENST00000392245 ARHGEF5Q12774 1597 aa19.16■□□□□ 0.66
SUMO1-202ENST00000392245 MROH1Q8NDA8 1641 aa19.16■□□□□ 0.66
SUMO1-202ENST00000392245 SLIT1O75093 1534 aa19.15■□□□□ 0.66
SUMO1-202ENST00000392245 TSPY4P0CV99 314 aa19.14■□□□□ 0.65
SUMO1-202ENST00000392245 TSPY10P0CW01 314 aa19.14■□□□□ 0.65
SUMO1-202ENST00000392245 RBM33Q96EV2 1170 aaKnown RBP19.12■□□□□ 0.65
SUMO1-202ENST00000392245 EIF2AK4Q9P2K8 1649 aaKnown RBP19.11■□□□□ 0.65
SUMO1-202ENST00000392245 TMEM94Q12767 1356 aa19.11■□□□□ 0.65
SUMO1-202ENST00000392245 PIK3C2BO00750 1634 aa19.09■□□□□ 0.65
SUMO1-202ENST00000392245 MAST1Q9Y2H9 1570 aa19.09■□□□□ 0.65
SUMO1-202ENST00000392245 EID1Q9Y6B2 187 aa19.08■□□□□ 0.64
SUMO1-202ENST00000392245 MAP3K1Q13233 1512 aa19.08■□□□□ 0.64
SUMO1-202ENST00000392245 PHLPP1O60346 1717 aa19.07■□□□□ 0.64
SUMO1-202ENST00000392245 C1QBPQ07021 282 aaKnown RBP19.06■□□□□ 0.64
SUMO1-202ENST00000392245 PROSER2Q86WR7 435 aaPredicted RBP19.06■□□□□ 0.64
SUMO1-202ENST00000392245 KCNA6P17658 529 aa19.05■□□□□ 0.64
SUMO1-202ENST00000392245 TMEM2Q9UHN6 1383 aa19.04■□□□□ 0.64
SUMO1-202ENST00000392245 UPF1Q92900 1129 aaKnown RBP eCLIP19.03■□□□□ 0.64
SUMO1-202ENST00000392245 SLC26A8Q96RN1 970 aa19.03■□□□□ 0.64
SUMO1-202ENST00000392245 TET3O43151 1660 aa19.01■□□□□ 0.63
SUMO1-202ENST00000392245 ARHGAP31Q2M1Z3 1444 aa19.01■□□□□ 0.63
SUMO1-202ENST00000392245 JCADQ9P266 1359 aa19■□□□□ 0.63
SUMO1-202ENST00000392245 LRRC9Q6ZRR7 1453 aa19■□□□□ 0.63
SUMO1-202ENST00000392245 PRDM15P57071 1507 aaPredicted RBP19■□□□□ 0.63
SUMO1-202ENST00000392245 STAG3Q9UJ98 1225 aa18.99■□□□□ 0.63
SUMO1-202ENST00000392245 DUOX2Q9NRD8 1548 aa18.99■□□□□ 0.63
SUMO1-202ENST00000392245 SLAIN2Q9P270 581 aa18.98■□□□□ 0.63
SUMO1-202ENST00000392245 LRP6O75581 1613 aa18.97■□□□□ 0.63
SUMO1-202ENST00000392245 COL16A1Q07092 1604 aaPredicted RBP18.97■□□□□ 0.63
SUMO1-202ENST00000392245 EFCAB6Q5THR3 1501 aa18.97■□□□□ 0.63
SUMO1-202ENST00000392245 TRIM52Q96A61 297 aa18.97■□□□□ 0.63
SUMO1-202ENST00000392245 KDM5AP29375 1690 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 154.8 ms