RNA–Protein interactions for RNA: ENST00000390464.2

TRAV38-1-201, Transcript of T cell receptor alpha variable 38-1, humanhuman

APPRIS P1 BASIC

Gene TRAV38-1, Length 353 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1-201ENST00000390464 LOC105371045A0A1W2PR82 267 aa11.24□□□□□ -0.61
TRAV38-1-201ENST00000390464 GGT6Q6P531 493 aa11.24□□□□□ -0.61
TRAV38-1-201ENST00000390464 FBXO41Q8TF61 875 aa11.24□□□□□ -0.61
TRAV38-1-201ENST00000390464 MBD5Q9P267 1494 aa11.24□□□□□ -0.61
TRAV38-1-201ENST00000390464 POLR1AO95602 1720 aaPredicted RBP11.23□□□□□ -0.61
TRAV38-1-201ENST00000390464 TSPY4P0CV99 314 aa11.23□□□□□ -0.61
TRAV38-1-201ENST00000390464 TSPY10P0CW01 314 aa11.23□□□□□ -0.61
TRAV38-1-201ENST00000390464 ZNF644Q9H582 1327 aaPredicted RBP11.23□□□□□ -0.61
TRAV38-1-201ENST00000390464 KDM5DQ9BY66 1539 aa11.23□□□□□ -0.61
TRAV38-1-201ENST00000390464 EIF2AK4Q9P2K8 1649 aaKnown RBP11.23□□□□□ -0.61
TRAV38-1-201ENST00000390464 CAMSAP1Q5T5Y3 1602 aa11.22□□□□□ -0.61
TRAV38-1-201ENST00000390464 CFAP65Q6ZU64 1925 aaKnown RBP11.22□□□□□ -0.61
TRAV38-1-201ENST00000390464 MAST1Q9Y2H9 1570 aa11.22□□□□□ -0.61
TRAV38-1-201ENST00000390464 CEP170BQ9Y4F5 1589 aaPredicted RBP11.22□□□□□ -0.61
TRAV38-1-201ENST00000390464 MYOM3Q5VTT5 1437 aa11.21□□□□□ -0.61
TRAV38-1-201ENST00000390464 ZMYM3Q14202 1370 aa11.21□□□□□ -0.61
TRAV38-1-201ENST00000390464 PTPN23Q9H3S7 1636 aa11.2□□□□□ -0.62
TRAV38-1-201ENST00000390464 RNF17Q9BXT8 1623 aaKnown RBP11.2□□□□□ -0.62
TRAV38-1-201ENST00000390464 MIA2Q96PC5 1412 aa11.19□□□□□ -0.62
TRAV38-1-201ENST00000390464 DHX29Q7Z478 1369 aaKnown RBP11.19□□□□□ -0.62
TRAV38-1-201ENST00000390464 CEP152O94986 1710 aa11.19□□□□□ -0.62
TRAV38-1-201ENST00000390464 KIF3BO15066 747 aa11.18□□□□□ -0.62
TRAV38-1-201ENST00000390464 NPM3O75607 178 aaKnown RBP11.18□□□□□ -0.62
TRAV38-1-201ENST00000390464 PTPRTO14522 1441 aa11.18□□□□□ -0.62
TRAV38-1-201ENST00000390464 NCOA1Q15788 1441 aa11.18□□□□□ -0.62
TRAV38-1-201ENST00000390464 KCNA4P22459 653 aa11.17□□□□□ -0.62
TRAV38-1-201ENST00000390464 PTPRKQ15262 1439 aa11.17□□□□□ -0.62
TRAV38-1-201ENST00000390464 WASHC2CQ9Y4E1 1318 aa11.16□□□□□ -0.62
TRAV38-1-201ENST00000390464 CERKQ8TCT0 537 aa11.16□□□□□ -0.62
TRAV38-1-201ENST00000390464 DNMT1P26358 1616 aaKnown RBP11.16□□□□□ -0.62
TRAV38-1-201ENST00000390464 DUOX2Q9NRD8 1548 aa11.15□□□□□ -0.62
TRAV38-1-201ENST00000390464 PZPP20742 1482 aa11.15□□□□□ -0.62
TRAV38-1-201ENST00000390464 PLA2R1Q13018 1463 aa11.15□□□□□ -0.62
TRAV38-1-201ENST00000390464 SHANK2Q9UPX8 1470 aa11.15□□□□□ -0.62
TRAV38-1-201ENST00000390464 A2ML1A8K2U0 1454 aa11.14□□□□□ -0.63
TRAV38-1-201ENST00000390464 KANK4Q5T7N3 995 aaPredicted RBP11.13□□□□□ -0.63
TRAV38-1-201ENST00000390464 TNRQ92752 1358 aa11.13□□□□□ -0.63
TRAV38-1-201ENST00000390464 NLRP1Q9C000 1473 aa11.12□□□□□ -0.63
TRAV38-1-201ENST00000390464 ABCC3O15438 1527 aa11.11□□□□□ -0.63
TRAV38-1-201ENST00000390464 PKD2Q13563 968 aa11.11□□□□□ -0.63
TRAV38-1-201ENST00000390464 FGD6Q6ZV73 1430 aa11.1□□□□□ -0.63
TRAV38-1-201ENST00000390464 ERBINQ96RT1 1412 aa11.1□□□□□ -0.63
TRAV38-1-201ENST00000390464 KIF15Q9NS87 1388 aa11.1□□□□□ -0.63
TRAV38-1-201ENST00000390464 IQSEC2Q5JU85 1478 aa11.1□□□□□ -0.63
TRAV38-1-201ENST00000390464 UGGT1Q9NYU2 1555 aa11.1□□□□□ -0.63
TRAV38-1-201ENST00000390464 DAPK1P53355 1430 aa11.09□□□□□ -0.63
TRAV38-1-201ENST00000390464 PRDM15P57071 1507 aaPredicted RBP11.09□□□□□ -0.63
TRAV38-1-201ENST00000390464 DEPDC5O75140 1603 aa11.09□□□□□ -0.63
TRAV38-1-201ENST00000390464 IQGAP1P46940 1657 aa11.09□□□□□ -0.63
TRAV38-1-201ENST00000390464 KANK1Q14678 1352 aa11.09□□□□□ -0.63
TRAV38-1-201ENST00000390464 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
TRAV38-1-201ENST00000390464 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
TRAV38-1-201ENST00000390464 TCOF1Q13428 1488 aaKnown RBP11.08□□□□□ -0.64
TRAV38-1-201ENST00000390464 UBR1Q8IWV7 1749 aa11.07□□□□□ -0.64
TRAV38-1-201ENST00000390464 ANKRD30AQ9BXX3 1397 aa11.07□□□□□ -0.64
TRAV38-1-201ENST00000390464 LTBP4Q8N2S1 1624 aa11.07□□□□□ -0.64
TRAV38-1-201ENST00000390464 SPATA31D1Q6ZQQ2 1576 aa11.07□□□□□ -0.64
TRAV38-1-201ENST00000390464 ERVK-7P63135 1459 aa11.06□□□□□ -0.64
TRAV38-1-201ENST00000390464 ABCC5O15440 1437 aa11.05□□□□□ -0.64
TRAV38-1-201ENST00000390464 FAM50AQ14320 339 aaKnown RBP11.05□□□□□ -0.64
TRAV38-1-201ENST00000390464 THEMISQ8N1K5 641 aaPredicted RBP11.05□□□□□ -0.64
TRAV38-1-201ENST00000390464 NEURL4Q96JN8 1562 aa11.05□□□□□ -0.64
TRAV38-1-201ENST00000390464 FBXO31Q5XUX0 539 aaPredicted RBP11.04□□□□□ -0.64
TRAV38-1-201ENST00000390464 RRP7BPQ9NSQ0 103 aa11.04□□□□□ -0.64
TRAV38-1-201ENST00000390464 KDM5AP29375 1690 aaKnown RBP11.04□□□□□ -0.64
TRAV38-1-201ENST00000390464 CPS1P31327 1500 aa11.04□□□□□ -0.64
TRAV38-1-201ENST00000390464 ANKLE2Q86XL3 938 aa11.03□□□□□ -0.64
TRAV38-1-201ENST00000390464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRAV38-1-201ENST00000390464 GCC2Q8IWJ2 1684 aa11.03□□□□□ -0.64
TRAV38-1-201ENST00000390464 ZNF335Q9H4Z2 1342 aaPredicted RBP11.02□□□□□ -0.65
TRAV38-1-201ENST00000390464 SYNMO15061 1565 aa11.02□□□□□ -0.65
TRAV38-1-201ENST00000390464 PIK3C2BO00750 1634 aa11.02□□□□□ -0.65
TRAV38-1-201ENST00000390464 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRAV38-1-201ENST00000390464 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
TRAV38-1-201ENST00000390464 CHIC2Q9UKJ5 165 aa11.01□□□□□ -0.65
TRAV38-1-201ENST00000390464 TET3O43151 1660 aa11.01□□□□□ -0.65
TRAV38-1-201ENST00000390464 NPHP4O75161 1426 aaPredicted RBP11.01□□□□□ -0.65
TRAV38-1-201ENST00000390464 ADGRL2O95490 1459 aa11□□□□□ -0.65
TRAV38-1-201ENST00000390464 MYO5BQ9ULV0 1848 aa11□□□□□ -0.65
TRAV38-1-201ENST00000390464 ARHGAP31Q2M1Z3 1444 aa11□□□□□ -0.65
TRAV38-1-201ENST00000390464 EFCAB6Q5THR3 1501 aa10.99□□□□□ -0.65
TRAV38-1-201ENST00000390464 UBAP1LF5GYI3 381 aa10.98□□□□□ -0.65
TRAV38-1-201ENST00000390464 MED14O60244 1454 aa10.98□□□□□ -0.65
TRAV38-1-201ENST00000390464 SCAF11Q99590 1463 aaKnown RBP10.98□□□□□ -0.65
TRAV38-1-201ENST00000390464 LMTK2Q8IWU2 1503 aa10.98□□□□□ -0.65
TRAV38-1-201ENST00000390464 EID1Q9Y6B2 187 aa10.97□□□□□ -0.65
TRAV38-1-201ENST00000390464 UNC13BO14795 1591 aa10.97□□□□□ -0.65
TRAV38-1-201ENST00000390464 VWDEQ8N2E2 1590 aa10.97□□□□□ -0.65
TRAV38-1-201ENST00000390464 ANKRD50Q9ULJ7 1429 aa10.96□□□□□ -0.65
TRAV38-1-201ENST00000390464 ADGRB3O60242 1522 aa10.95□□□□□ -0.66
TRAV38-1-201ENST00000390464 SLIT1O75093 1534 aa10.95□□□□□ -0.66
TRAV38-1-201ENST00000390464 RPRD2Q5VT52 1461 aaKnown RBP10.95□□□□□ -0.66
TRAV38-1-201ENST00000390464 STRCP1A6NGW2 1772 aa10.95□□□□□ -0.66
TRAV38-1-201ENST00000390464 TOM1O60784 492 aa10.94□□□□□ -0.66
TRAV38-1-201ENST00000390464 IQGAP3Q86VI3 1631 aa10.94□□□□□ -0.66
TRAV38-1-201ENST00000390464 DISP3Q9P2K9 1392 aa10.93□□□□□ -0.66
TRAV38-1-201ENST00000390464 E9PCH4 1651 aa10.92□□□□□ -0.66
TRAV38-1-201ENST00000390464 ARHGAP23Q9P227 1491 aa10.92□□□□□ -0.66
TRAV38-1-201ENST00000390464 TXNDC2Q86VQ3 553 aa10.91□□□□□ -0.66
TRAV38-1-201ENST00000390464 SPHKAPQ2M3C7 1700 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms