RNA–Protein interactions for RNA: ENST00000390329.3

AP000346.1-201, humanhuman

TSL 5 BASIC

Gene AP000346.1, Length 1,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000346.1-201ENST00000390329 NPHP4O75161 1426 aaPredicted RBP17.61■□□□□ 0.41
AP000346.1-201ENST00000390329 STRCP1A6NGW2 1772 aa17.58■□□□□ 0.41
AP000346.1-201ENST00000390329 SRCAPQ6ZRS2 3230 aa17.58■□□□□ 0.4
AP000346.1-201ENST00000390329 PLXNC1O60486 1568 aa17.57■□□□□ 0.4
AP000346.1-201ENST00000390329 ATP7AQ04656 1500 aa17.57■□□□□ 0.4
AP000346.1-201ENST00000390329 SYCP2Q9BX26 1530 aa17.57■□□□□ 0.4
AP000346.1-201ENST00000390329 SETD1AO15047 1707 aaKnown RBP17.56■□□□□ 0.4
AP000346.1-201ENST00000390329 CDC42BPAQ5VT25 1732 aa17.55■□□□□ 0.4
AP000346.1-201ENST00000390329 MED14O60244 1454 aa17.55■□□□□ 0.4
AP000346.1-201ENST00000390329 UPF1Q92900 1129 aaKnown RBP eCLIP17.54■□□□□ 0.4
AP000346.1-201ENST00000390329 RNF17Q9BXT8 1623 aaKnown RBP17.53■□□□□ 0.4
AP000346.1-201ENST00000390329 MIA2Q96PC5 1412 aa17.5■□□□□ 0.39
AP000346.1-201ENST00000390329 DEPDC5O75140 1603 aa17.5■□□□□ 0.39
AP000346.1-201ENST00000390329 INO80Q9ULG1 1556 aaPredicted RBP17.49■□□□□ 0.39
AP000346.1-201ENST00000390329 FYCO1Q9BQS8 1478 aa17.49■□□□□ 0.39
AP000346.1-201ENST00000390329 UGGT1Q9NYU2 1555 aa17.49■□□□□ 0.39
AP000346.1-201ENST00000390329 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
AP000346.1-201ENST00000390329 CASKIN1Q8WXD9 1431 aa17.48■□□□□ 0.39
AP000346.1-201ENST00000390329 FAM135AQ9P2D6 1515 aa17.48■□□□□ 0.39
AP000346.1-201ENST00000390329 GPATCH8Q9UKJ3 1502 aaKnown RBP17.48■□□□□ 0.39
AP000346.1-201ENST00000390329 KIF3BO15066 747 aa17.48■□□□□ 0.39
AP000346.1-201ENST00000390329 CFDP1Q9UEE9 299 aaPredicted RBP17.47■□□□□ 0.39
AP000346.1-201ENST00000390329 FAM135BQ49AJ0 1406 aa17.47■□□□□ 0.39
AP000346.1-201ENST00000390329 KIAA1107Q9UPP5 1409 aa17.47■□□□□ 0.39
AP000346.1-201ENST00000390329 WASHC2CQ9Y4E1 1318 aa17.47■□□□□ 0.39
AP000346.1-201ENST00000390329 PZPP20742 1482 aa17.46■□□□□ 0.39
AP000346.1-201ENST00000390329 SYNMO15061 1565 aa17.45■□□□□ 0.38
AP000346.1-201ENST00000390329 DHX29Q7Z478 1369 aaKnown RBP17.44■□□□□ 0.38
AP000346.1-201ENST00000390329 ZNF644Q9H582 1327 aaPredicted RBP17.44■□□□□ 0.38
AP000346.1-201ENST00000390329 NLRP1Q9C000 1473 aa17.44■□□□□ 0.38
AP000346.1-201ENST00000390329 TRIM52Q96A61 297 aa17.43■□□□□ 0.38
AP000346.1-201ENST00000390329 ADGBQ8N7X0 1667 aa17.42■□□□□ 0.38
AP000346.1-201ENST00000390329 XIRP1Q702N8 1843 aaKnown RBP17.41■□□□□ 0.38
AP000346.1-201ENST00000390329 CCDC18Q5T9S5 1454 aa17.4■□□□□ 0.38
AP000346.1-201ENST00000390329 PLEKHH2Q8IVE3 1493 aa17.4■□□□□ 0.38
AP000346.1-201ENST00000390329 LTKP29376 864 aa17.38■□□□□ 0.37
AP000346.1-201ENST00000390329 RBM33Q96EV2 1170 aaKnown RBP17.38■□□□□ 0.37
AP000346.1-201ENST00000390329 VPS8Q8N3P4 1428 aa17.38■□□□□ 0.37
AP000346.1-201ENST00000390329 KDM5DQ9BY66 1539 aa17.37■□□□□ 0.37
AP000346.1-201ENST00000390329 ZC3H13Q5T200 1668 aaKnown RBP17.36■□□□□ 0.37
AP000346.1-201ENST00000390329 CCNB3Q8WWL7 1395 aa17.36■□□□□ 0.37
AP000346.1-201ENST00000390329 TXNDC2Q86VQ3 553 aa17.35■□□□□ 0.37
AP000346.1-201ENST00000390329 ROBO1Q9Y6N7 1651 aa17.35■□□□□ 0.37
AP000346.1-201ENST00000390329 TMEM94Q12767 1356 aa17.34■□□□□ 0.37
AP000346.1-201ENST00000390329 MBD5Q9P267 1494 aa17.33■□□□□ 0.37
AP000346.1-201ENST00000390329 TIAM1Q13009 1591 aa17.32■□□□□ 0.36
AP000346.1-201ENST00000390329 RTEL1-TNFRSF6BF6WH68 1400 aa17.32■□□□□ 0.36
AP000346.1-201ENST00000390329 JCADQ9P266 1359 aa17.31■□□□□ 0.36
AP000346.1-201ENST00000390329 PROSER2Q86WR7 435 aaPredicted RBP17.31■□□□□ 0.36
AP000346.1-201ENST00000390329 SCAF11Q99590 1463 aaKnown RBP17.31■□□□□ 0.36
AP000346.1-201ENST00000390329 MEX3CQ5U5Q3 659 aaKnown RBP17.29■□□□□ 0.36
AP000346.1-201ENST00000390329 ZNF772Q68DY9 489 aaPredicted RBP17.29■□□□□ 0.36
AP000346.1-201ENST00000390329 RXRBP28702 533 aa17.28■□□□□ 0.36
AP000346.1-201ENST00000390329 EHBP1L1Q8N3D4 1523 aa17.27■□□□□ 0.36
AP000346.1-201ENST00000390329 SLAIN2Q9P270 581 aa17.27■□□□□ 0.36
AP000346.1-201ENST00000390329 NCOA2Q15596 1464 aa17.26■□□□□ 0.35
AP000346.1-201ENST00000390329 KCNA6P17658 529 aa17.26■□□□□ 0.35
AP000346.1-201ENST00000390329 CFAP65Q6ZU64 1925 aaKnown RBP17.25■□□□□ 0.35
AP000346.1-201ENST00000390329 LRP6O75581 1613 aa17.25■□□□□ 0.35
AP000346.1-201ENST00000390329 PHLPP1O60346 1717 aa17.25■□□□□ 0.35
AP000346.1-201ENST00000390329 EID1Q9Y6B2 187 aa17.25■□□□□ 0.35
AP000346.1-201ENST00000390329 UBR1Q8IWV7 1749 aa17.24■□□□□ 0.35
AP000346.1-201ENST00000390329 SLC26A8Q96RN1 970 aa17.24■□□□□ 0.35
AP000346.1-201ENST00000390329 ERVK-7P63135 1459 aa17.24■□□□□ 0.35
AP000346.1-201ENST00000390329 ARHGAP23Q9P227 1491 aa17.23■□□□□ 0.35
AP000346.1-201ENST00000390329 MAP3K1Q13233 1512 aa17.21■□□□□ 0.35
AP000346.1-201ENST00000390329 SLIT1O75093 1534 aa17.21■□□□□ 0.34
AP000346.1-201ENST00000390329 MTUS2Q5JR59 1369 aa17.2■□□□□ 0.34
AP000346.1-201ENST00000390329 ABCC3O15438 1527 aa17.2■□□□□ 0.34
AP000346.1-201ENST00000390329 SPATA31A6Q5VVP1 1343 aa17.2■□□□□ 0.34
AP000346.1-201ENST00000390329 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
AP000346.1-201ENST00000390329 NUTM2BA6NNL0 878 aaPredicted RBP17.17■□□□□ 0.34
AP000346.1-201ENST00000390329 NUTM2EB1AL46 878 aaPredicted RBP17.17■□□□□ 0.34
AP000346.1-201ENST00000390329 NUTM2AQ8IVF1 878 aaPredicted RBP17.17■□□□□ 0.34
AP000346.1-201ENST00000390329 MSH6P52701 1360 aa17.16■□□□□ 0.34
AP000346.1-201ENST00000390329 COL16A1Q07092 1604 aaPredicted RBP17.16■□□□□ 0.34
AP000346.1-201ENST00000390329 CCDC141Q6ZP82 1450 aa17.16■□□□□ 0.34
AP000346.1-201ENST00000390329 TMEM2Q9UHN6 1383 aa17.15■□□□□ 0.34
AP000346.1-201ENST00000390329 CDK12Q9NYV4 1490 aaPredicted RBP17.14■□□□□ 0.33
AP000346.1-201ENST00000390329 RSPH4AQ5TD94 716 aa17.14■□□□□ 0.33
AP000346.1-201ENST00000390329 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
AP000346.1-201ENST00000390329 STAG3Q9UJ98 1225 aa17.14■□□□□ 0.33
AP000346.1-201ENST00000390329 PRDM15P57071 1507 aaPredicted RBP17.14■□□□□ 0.33
AP000346.1-201ENST00000390329 TSPY4P0CV99 314 aa17.13■□□□□ 0.33
AP000346.1-201ENST00000390329 TSPY10P0CW01 314 aa17.13■□□□□ 0.33
AP000346.1-201ENST00000390329 AFF2P51816 1311 aa17.13■□□□□ 0.33
AP000346.1-201ENST00000390329 FGD6Q6ZV73 1430 aa17.12■□□□□ 0.33
AP000346.1-201ENST00000390329 ZRANB1Q9UGI0 708 aa17.11■□□□□ 0.33
AP000346.1-201ENST00000390329 KANK4Q5T7N3 995 aaPredicted RBP17.1■□□□□ 0.33
AP000346.1-201ENST00000390329 BCANQ96GW7 911 aa17.1■□□□□ 0.33
AP000346.1-201ENST00000390329 QTRT2Q9H974 415 aaKnown RBP17.1■□□□□ 0.33
AP000346.1-201ENST00000390329 TET3O43151 1660 aa17.1■□□□□ 0.33
AP000346.1-201ENST00000390329 CAMSAP2Q08AD1 1489 aa17.09■□□□□ 0.33
AP000346.1-201ENST00000390329 CEP152O94986 1710 aa17.08■□□□□ 0.32
AP000346.1-201ENST00000390329 RGS12O14924 1447 aa17.08■□□□□ 0.32
AP000346.1-201ENST00000390329 PIK3C2BO00750 1634 aa17.07■□□□□ 0.32
AP000346.1-201ENST00000390329 RBM6P78332 1123 aaKnown RBP17.07■□□□□ 0.32
AP000346.1-201ENST00000390329 IDI1Q13907 227 aa17.07■□□□□ 0.32
AP000346.1-201ENST00000390329 SETBP1Q9Y6X0 1596 aa17.06■□□□□ 0.32
AP000346.1-201ENST00000390329 MROH1Q8NDA8 1641 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms