RNA–Protein interactions for RNA: ENST00000389675.6

MRPL28-202, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL28, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-202ENST00000389675 PLPPR3Q6T4P5 718 aa24.74■■□□□ 1.55
MRPL28-202ENST00000389675 NCOA1Q15788 1441 aa24.74■■□□□ 1.55
MRPL28-202ENST00000389675 PTPRKQ15262 1439 aa24.73■■□□□ 1.55
MRPL28-202ENST00000389675 ERBINQ96RT1 1412 aa24.7■■□□□ 1.55
MRPL28-202ENST00000389675 EIF2AK4Q9P2K8 1649 aaKnown RBP24.7■■□□□ 1.54
MRPL28-202ENST00000389675 CNTLNQ9NXG0 1405 aa24.69■■□□□ 1.54
MRPL28-202ENST00000389675 ROCK1Q13464 1354 aa24.67■■□□□ 1.54
MRPL28-202ENST00000389675 PPP6R1Q9UPN7 881 aa24.67■■□□□ 1.54
MRPL28-202ENST00000389675 CERKQ8TCT0 537 aa24.64■■□□□ 1.54
MRPL28-202ENST00000389675 RNF17Q9BXT8 1623 aaKnown RBP24.64■■□□□ 1.53
MRPL28-202ENST00000389675 CLTCQ00610 1675 aaKnown RBP24.63■■□□□ 1.53
MRPL28-202ENST00000389675 STRCQ7RTU9 1775 aa24.63■■□□□ 1.53
MRPL28-202ENST00000389675 WASHC2CQ9Y4E1 1318 aa24.62■■□□□ 1.53
MRPL28-202ENST00000389675 ANKRD50Q9ULJ7 1429 aa24.62■■□□□ 1.53
MRPL28-202ENST00000389675 CEBPAP49715 358 aaPredicted RBP24.62■■□□□ 1.53
MRPL28-202ENST00000389675 KDM5DQ9BY66 1539 aa24.61■■□□□ 1.53
MRPL28-202ENST00000389675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.6■■□□□ 1.538e-6■□□□□ 8.2
MRPL28-202ENST00000389675 FAM135AQ9P2D6 1515 aa24.6■■□□□ 1.53
MRPL28-202ENST00000389675 MROH2AA6NES4 1674 aa24.59■■□□□ 1.53
MRPL28-202ENST00000389675 SETD1BQ9UPS6 1966 aaKnown RBP24.58■■□□□ 1.53
MRPL28-202ENST00000389675 ZMYM3Q14202 1370 aa24.58■■□□□ 1.53
MRPL28-202ENST00000389675 KANK1Q14678 1352 aa24.57■■□□□ 1.52
MRPL28-202ENST00000389675 C3P01024 1663 aa24.57■■□□□ 1.52
MRPL28-202ENST00000389675 MROH1Q8NDA8 1641 aa24.55■■□□□ 1.52
MRPL28-202ENST00000389675 PRDM15P57071 1507 aaPredicted RBP24.54■■□□□ 1.52
MRPL28-202ENST00000389675 DEPDC5O75140 1603 aa24.53■■□□□ 1.52
MRPL28-202ENST00000389675 ZC3H13Q5T200 1668 aaKnown RBP24.53■■□□□ 1.52
MRPL28-202ENST00000389675 ABCC3O15438 1527 aa24.53■■□□□ 1.52
MRPL28-202ENST00000389675 CEP152O94986 1710 aa24.49■■□□□ 1.51
MRPL28-202ENST00000389675 NAIPQ13075 1403 aa24.48■■□□□ 1.51
MRPL28-202ENST00000389675 GCC2Q8IWJ2 1684 aa24.47■■□□□ 1.51
MRPL28-202ENST00000389675 HFM1A2PYH4 1435 aa24.47■■□□□ 1.51
MRPL28-202ENST00000389675 NPATQ14207 1427 aa24.46■■□□□ 1.51
MRPL28-202ENST00000389675 UHRF1BP1Q6BDS2 1440 aa24.46■■□□□ 1.51
MRPL28-202ENST00000389675 PZPP20742 1482 aa24.45■■□□□ 1.51
MRPL28-202ENST00000389675 CAMSAP1Q5T5Y3 1602 aa24.45■■□□□ 1.5
MRPL28-202ENST00000389675 UNC13BO14795 1591 aa24.44■■□□□ 1.5
MRPL28-202ENST00000389675 VWDEQ8N2E2 1590 aa24.42■■□□□ 1.5
MRPL28-202ENST00000389675 FBXO31Q5XUX0 539 aaPredicted RBP24.41■■□□□ 1.5
MRPL28-202ENST00000389675 DMRT2Q9Y5R5 561 aa24.41■■□□□ 1.5
MRPL28-202ENST00000389675 NUP155O75694 1391 aa24.41■■□□□ 1.5
MRPL28-202ENST00000389675 LMTK2Q8IWU2 1503 aa24.4■■□□□ 1.5
MRPL28-202ENST00000389675 DISP3Q9P2K9 1392 aa24.39■■□□□ 1.49
MRPL28-202ENST00000389675 TNRQ92752 1358 aa24.38■■□□□ 1.49
MRPL28-202ENST00000389675 SPATA31D1Q6ZQQ2 1576 aa24.37■■□□□ 1.49
MRPL28-202ENST00000389675 ARHGAP31Q2M1Z3 1444 aa24.37■■□□□ 1.49
MRPL28-202ENST00000389675 PTPRTO14522 1441 aa24.35■■□□□ 1.49
MRPL28-202ENST00000389675 EFCAB6Q5THR3 1501 aa24.35■■□□□ 1.49
MRPL28-202ENST00000389675 TRIM52Q96A61 297 aa24.35■■□□□ 1.49
MRPL28-202ENST00000389675 IQGAP3Q86VI3 1631 aa24.35■■□□□ 1.49
MRPL28-202ENST00000389675 ERVK-7P63135 1459 aa24.34■■□□□ 1.49
MRPL28-202ENST00000389675 CFAP65Q6ZU64 1925 aaKnown RBP24.34■■□□□ 1.49
MRPL28-202ENST00000389675 ILDR2Q71H61 639 aa24.34■■□□□ 1.49
MRPL28-202ENST00000389675 TET3O43151 1660 aa24.34■■□□□ 1.49
MRPL28-202ENST00000389675 LTBP4Q8N2S1 1624 aa24.33■■□□□ 1.49
MRPL28-202ENST00000389675 MYO3AQ8NEV4 1616 aa24.33■■□□□ 1.49
MRPL28-202ENST00000389675 SETD5Q9C0A6 1442 aa24.31■■□□□ 1.48
MRPL28-202ENST00000389675 IQSEC2Q5JU85 1478 aa24.28■■□□□ 1.48
MRPL28-202ENST00000389675 RPRD2Q5VT52 1461 aaKnown RBP24.28■■□□□ 1.48
MRPL28-202ENST00000389675 CEP170BQ9Y4F5 1589 aaPredicted RBP24.28■■□□□ 1.48
MRPL28-202ENST00000389675 SOCS7O14512 581 aa24.27■■□□□ 1.48
MRPL28-202ENST00000389675 A2ML1A8K2U0 1454 aa24.26■■□□□ 1.47
MRPL28-202ENST00000389675 NLRP1Q9C000 1473 aa24.26■■□□□ 1.47
MRPL28-202ENST00000389675 ZNF142P52746 1687 aaPredicted RBP24.26■■□□□ 1.47
MRPL28-202ENST00000389675 ACIN1Q9UKV3 1341 aaKnown RBP24.23■■□□□ 1.47
MRPL28-202ENST00000389675 E9PCH4 1651 aa24.23■■□□□ 1.47
MRPL28-202ENST00000389675 RAB3GAP2Q9H2M9 1393 aa24.22■■□□□ 1.47
MRPL28-202ENST00000389675 SLC4A1APQ9BWU0 796 aaKnown RBP24.22■■□□□ 1.47
MRPL28-202ENST00000389675 NOS1P29475 1434 aa24.21■■□□□ 1.47
MRPL28-202ENST00000389675 SYNMO15061 1565 aa24.19■■□□□ 1.46
MRPL28-202ENST00000389675 UGGT1Q9NYU2 1555 aa24.18■■□□□ 1.46
MRPL28-202ENST00000389675 STAG3Q9UJ98 1225 aa24.18■■□□□ 1.46
MRPL28-202ENST00000389675 PKD2Q13563 968 aa24.17■■□□□ 1.46
MRPL28-202ENST00000389675 THEMISQ8N1K5 641 aaPredicted RBP24.17■■□□□ 1.46
MRPL28-202ENST00000389675 TRIM26Q12899 539 aaPredicted RBP24.16■■□□□ 1.46
MRPL28-202ENST00000389675 SLC52A1Q9NWF4 448 aa24.16■■□□□ 1.46
MRPL28-202ENST00000389675 IDI1Q13907 227 aa24.14■■□□□ 1.45
MRPL28-202ENST00000389675 PIK3C2BO00750 1634 aa24.13■■□□□ 1.45
MRPL28-202ENST00000389675 MPHOSPH9Q99550 1183 aa24.11■■□□□ 1.45
MRPL28-202ENST00000389675 PLA2R1Q13018 1463 aa24.11■■□□□ 1.45
MRPL28-202ENST00000389675 SPHKAPQ2M3C7 1700 aa24.1■■□□□ 1.45
MRPL28-202ENST00000389675 UBR1Q8IWV7 1749 aa24.1■■□□□ 1.45
MRPL28-202ENST00000389675 CHGAP10645 457 aaKnown RBP24.09■■□□□ 1.45
MRPL28-202ENST00000389675 HRCP23327 699 aa24.09■■□□□ 1.45
MRPL28-202ENST00000389675 NCKAP5LQ9HCH0 1330 aa24.08■■□□□ 1.44
MRPL28-202ENST00000389675 ADGRB3O60242 1522 aa24.06■■□□□ 1.44
MRPL28-202ENST00000389675 FOXD1Q16676 465 aa24.06■■□□□ 1.44
MRPL28-202ENST00000389675 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
MRPL28-202ENST00000389675 KDM5AP29375 1690 aaKnown RBP24.04■■□□□ 1.44
MRPL28-202ENST00000389675 TRPM2O94759 1503 aa24.04■■□□□ 1.44
MRPL28-202ENST00000389675 ZNF335Q9H4Z2 1342 aaPredicted RBP24.02■■□□□ 1.44
MRPL28-202ENST00000389675 POLR1AO95602 1720 aaPredicted RBP24.01■■□□□ 1.43
MRPL28-202ENST00000389675 EID1Q9Y6B2 187 aa24.01■■□□□ 1.43
MRPL28-202ENST00000389675 TMEM2Q9UHN6 1383 aa24■■□□□ 1.43
MRPL28-202ENST00000389675 SLIT1O75093 1534 aa23.99■■□□□ 1.43
MRPL28-202ENST00000389675 TMEM131LA2VDJ0 1609 aa23.99■■□□□ 1.43
MRPL28-202ENST00000389675 CLTCL1P53675 1640 aa23.99■■□□□ 1.43
MRPL28-202ENST00000389675 TXNDC2Q86VQ3 553 aa23.98■■□□□ 1.43
MRPL28-202ENST00000389675 SCAF11Q99590 1463 aaKnown RBP23.97■■□□□ 1.43
MRPL28-202ENST00000389675 ARHGAP23Q9P227 1491 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms