RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.16■■□□□ 1.3
PDGFB-202ENST00000381551 GCC2Q8IWJ2 1684 aa23.16■■□□□ 1.3
PDGFB-202ENST00000381551 ADAMTSL3P82987 1691 aa23.15■■□□□ 1.3
PDGFB-202ENST00000381551 RNF17Q9BXT8 1623 aaKnown RBP23.15■■□□□ 1.3
PDGFB-202ENST00000381551 ESF1Q9H501 851 aaKnown RBP23.13■■□□□ 1.29
PDGFB-202ENST00000381551 WASHC2CQ9Y4E1 1318 aa23.12■■□□□ 1.29
PDGFB-202ENST00000381551 MROH1Q8NDA8 1641 aa23.11■■□□□ 1.29
PDGFB-202ENST00000381551 DEPDC5O75140 1603 aa23.11■■□□□ 1.29
PDGFB-202ENST00000381551 HRCP23327 699 aa23.09■■□□□ 1.29
PDGFB-202ENST00000381551 KANK1Q14678 1352 aa23.09■■□□□ 1.29
PDGFB-202ENST00000381551 RAB3GAP2Q9H2M9 1393 aa23.09■■□□□ 1.29
PDGFB-202ENST00000381551 MADDQ8WXG6 1647 aa23.08■■□□□ 1.29
PDGFB-202ENST00000381551 NUP155O75694 1391 aa23.08■■□□□ 1.29
PDGFB-202ENST00000381551 PRDM15P57071 1507 aaPredicted RBP23.08■■□□□ 1.28
PDGFB-202ENST00000381551 PCGF6Q9BYE7 350 aa23.07■■□□□ 1.28
PDGFB-202ENST00000381551 CNTLNQ9NXG0 1405 aa23.07■■□□□ 1.28
PDGFB-202ENST00000381551 UNC13BO14795 1591 aa23.06■■□□□ 1.28
PDGFB-202ENST00000381551 ILDR1Q86SU0 546 aaPredicted RBP23.06■■□□□ 1.28
PDGFB-202ENST00000381551 TRIM52Q96A61 297 aa23.06■■□□□ 1.28
PDGFB-202ENST00000381551 KDM5DQ9BY66 1539 aa23.06■■□□□ 1.28
PDGFB-202ENST00000381551 ACIN1Q9UKV3 1341 aaKnown RBP23.06■■□□□ 1.28
PDGFB-202ENST00000381551 FER1L4A9Z1Z3 1794 aa23.05■■□□□ 1.28
PDGFB-202ENST00000381551 VWDEQ8N2E2 1590 aa23.05■■□□□ 1.28
PDGFB-202ENST00000381551 ZMYM3Q14202 1370 aa23.04■■□□□ 1.28
PDGFB-202ENST00000381551 FAM135AQ9P2D6 1515 aa23.04■■□□□ 1.28
PDGFB-202ENST00000381551 ABCC3O15438 1527 aa23.03■■□□□ 1.28
PDGFB-202ENST00000381551 CLTCQ00610 1675 aaKnown RBP23.03■■□□□ 1.28
PDGFB-202ENST00000381551 CEBPAP49715 358 aaPredicted RBP23.02■■□□□ 1.28
PDGFB-202ENST00000381551 RIMS1Q86UR5 1692 aaKnown RBP23.01■■□□□ 1.27
PDGFB-202ENST00000381551 PTPRMP28827 1452 aa23■■□□□ 1.27
PDGFB-202ENST00000381551 LMTK2Q8IWU2 1503 aa23■■□□□ 1.27
PDGFB-202ENST00000381551 ZC3H13Q5T200 1668 aaKnown RBP22.98■■□□□ 1.27
PDGFB-202ENST00000381551 IQGAP3Q86VI3 1631 aa22.97■■□□□ 1.27
PDGFB-202ENST00000381551 CEP152O94986 1710 aa22.97■■□□□ 1.27
PDGFB-202ENST00000381551 MROH2AA6NES4 1674 aa22.97■■□□□ 1.27
PDGFB-202ENST00000381551 PLPPR3Q6T4P5 718 aa22.96■■□□□ 1.27
PDGFB-202ENST00000381551 ARHGAP31Q2M1Z3 1444 aa22.95■■□□□ 1.26
PDGFB-202ENST00000381551 MPHOSPH9Q99550 1183 aa22.95■■□□□ 1.26
PDGFB-202ENST00000381551 SLC4A1APQ9BWU0 796 aaKnown RBP22.95■■□□□ 1.26
PDGFB-202ENST00000381551 PZPP20742 1482 aa22.94■■□□□ 1.26
PDGFB-202ENST00000381551 FBXO31Q5XUX0 539 aaPredicted RBP22.94■■□□□ 1.26
PDGFB-202ENST00000381551 C3P01024 1663 aa22.93■■□□□ 1.26
PDGFB-202ENST00000381551 CAMSAP1Q5T5Y3 1602 aa22.93■■□□□ 1.26
PDGFB-202ENST00000381551 NPATQ14207 1427 aa22.91■■□□□ 1.26
PDGFB-202ENST00000381551 TET3O43151 1660 aa22.91■■□□□ 1.26
PDGFB-202ENST00000381551 PKD2Q13563 968 aa22.9■■□□□ 1.26
PDGFB-202ENST00000381551 EFCAB6Q5THR3 1501 aa22.9■■□□□ 1.26
PDGFB-202ENST00000381551 RPRD2Q5VT52 1461 aaKnown RBP22.86■■□□□ 1.25
PDGFB-202ENST00000381551 E9PCH4 1651 aa22.85■■□□□ 1.25
PDGFB-202ENST00000381551 CFAP65Q6ZU64 1925 aaKnown RBP22.85■■□□□ 1.25
PDGFB-202ENST00000381551 FOXD1Q16676 465 aa22.83■■□□□ 1.25
PDGFB-202ENST00000381551 ERVK-7P63135 1459 aa22.83■■□□□ 1.25
PDGFB-202ENST00000381551 NOS1P29475 1434 aa22.82■■□□□ 1.24
PDGFB-202ENST00000381551 SETD1BQ9UPS6 1966 aaKnown RBP22.82■■□□□ 1.24
PDGFB-202ENST00000381551 SPATA31D1Q6ZQQ2 1576 aa22.81■■□□□ 1.24
PDGFB-202ENST00000381551 TNRQ92752 1358 aa22.81■■□□□ 1.24
PDGFB-202ENST00000381551 PREX1Q8TCU6 1659 aa22.8■■□□□ 1.24
PDGFB-202ENST00000381551 PTPRTO14522 1441 aa22.79■■□□□ 1.24
PDGFB-202ENST00000381551 SLC52A1Q9NWF4 448 aa22.77■■□□□ 1.24
PDGFB-202ENST00000381551 IDI1Q13907 227 aa22.76■■□□□ 1.23
PDGFB-202ENST00000381551 PLA2R1Q13018 1463 aa22.76■■□□□ 1.23
PDGFB-202ENST00000381551 SYNMO15061 1565 aa22.73■■□□□ 1.23
PDGFB-202ENST00000381551 DHX57Q6P158 1386 aaKnown RBP22.73■■□□□ 1.23
PDGFB-202ENST00000381551 NLRP1Q9C000 1473 aa22.71■■□□□ 1.23
PDGFB-202ENST00000381551 ANKRD30BQ9BXX2 1392 aa22.7■■□□□ 1.22
PDGFB-202ENST00000381551 UHRF1BP1Q6BDS2 1440 aa22.7■■□□□ 1.22
PDGFB-202ENST00000381551 SPHKAPQ2M3C7 1700 aa22.7■■□□□ 1.22
PDGFB-202ENST00000381551 TRPM2O94759 1503 aa22.67■■□□□ 1.22
PDGFB-202ENST00000381551 MYO3AQ8NEV4 1616 aa22.67■■□□□ 1.22
PDGFB-202ENST00000381551 UGGT1Q9NYU2 1555 aa22.67■■□□□ 1.22
PDGFB-202ENST00000381551 A2ML1A8K2U0 1454 aa22.66■■□□□ 1.22
PDGFB-202ENST00000381551 PIK3C2BO00750 1634 aa22.65■■□□□ 1.22
PDGFB-202ENST00000381551 LMTK3Q96Q04 1460 aa22.65■■□□□ 1.22
PDGFB-202ENST00000381551 CEP170BQ9Y4F5 1589 aaPredicted RBP22.63■■□□□ 1.21
PDGFB-202ENST00000381551 THEMISQ8N1K5 641 aaPredicted RBP22.63■■□□□ 1.21
PDGFB-202ENST00000381551 STAG3Q9UJ98 1225 aa22.63■■□□□ 1.21
PDGFB-202ENST00000381551 CCDC144AA2RUR9 1427 aa22.63■■□□□ 1.21
PDGFB-202ENST00000381551 CLTCL1P53675 1640 aa22.61■■□□□ 1.21
PDGFB-202ENST00000381551 CHGAP10645 457 aaKnown RBP22.61■■□□□ 1.21
PDGFB-202ENST00000381551 HSPA2P54652 639 aa22.61■■□□□ 1.21
PDGFB-202ENST00000381551 ZNF142P52746 1687 aaPredicted RBP22.59■■□□□ 1.21
PDGFB-202ENST00000381551 TMEM131LA2VDJ0 1609 aa22.57■■□□□ 1.2
PDGFB-202ENST00000381551 UBR1Q8IWV7 1749 aa22.57■■□□□ 1.2
PDGFB-202ENST00000381551 KDM5AP29375 1690 aaKnown RBP22.56■■□□□ 1.2
PDGFB-202ENST00000381551 SIN3AQ96ST3 1273 aa22.56■■□□□ 1.2
PDGFB-202ENST00000381551 ADGRB3O60242 1522 aa22.56■■□□□ 1.2
PDGFB-202ENST00000381551 SPATA31E1Q6ZUB1 1445 aa22.53■■□□□ 1.2
PDGFB-202ENST00000381551 KIF1BO60333 1816 aa22.52■■□□□ 1.2
PDGFB-202ENST00000381551 TMEM2Q9UHN6 1383 aa22.52■■□□□ 1.2
PDGFB-202ENST00000381551 RGL3Q3MIN7 710 aa22.52■■□□□ 1.2
PDGFB-202ENST00000381551 ZNF326Q5BKZ1 582 aaKnown RBP22.52■■□□□ 1.2
PDGFB-202ENST00000381551 CCER1Q8TC90 406 aaPredicted RBP22.52■■□□□ 1.2
PDGFB-202ENST00000381551 MYO5BQ9ULV0 1848 aa22.5■■□□□ 1.19
PDGFB-202ENST00000381551 TXNDC2Q86VQ3 553 aa22.5■■□□□ 1.19
PDGFB-202ENST00000381551 ANKLE2Q86XL3 938 aa22.5■■□□□ 1.19
PDGFB-202ENST00000381551 ARHGAP23Q9P227 1491 aa22.49■■□□□ 1.19
PDGFB-202ENST00000381551 SLIT1O75093 1534 aa22.49■■□□□ 1.19
PDGFB-202ENST00000381551 LTKP29376 864 aa22.49■■□□□ 1.19
PDGFB-202ENST00000381551 HDGFP51858 240 aaKnown RBP22.49■■□□□ 1.19
PDGFB-202ENST00000381551 NEUROD1Q13562 356 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms