RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 C3P01024 1663 aa29.5■■■□□ 2.31
GTF3A-201ENST00000381140 RNF17Q9BXT8 1623 aaKnown RBP29.49■■■□□ 2.31
GTF3A-201ENST00000381140 CEBPAP49715 358 aaPredicted RBP29.49■■■□□ 2.31
GTF3A-201ENST00000381140 ERBINQ96RT1 1412 aa29.48■■■□□ 2.31
GTF3A-201ENST00000381140 CNTLNQ9NXG0 1405 aa29.48■■■□□ 2.31
GTF3A-201ENST00000381140 MROH2AA6NES4 1674 aa29.47■■■□□ 2.31
GTF3A-201ENST00000381140 ROCK1Q13464 1354 aa29.41■■■□□ 2.3
GTF3A-201ENST00000381140 MROH1Q8NDA8 1641 aa29.41■■■□□ 2.3
GTF3A-201ENST00000381140 KDM5DQ9BY66 1539 aa29.41■■■□□ 2.3
GTF3A-201ENST00000381140 CEP152O94986 1710 aa29.41■■■□□ 2.3
GTF3A-201ENST00000381140 PPP6R1Q9UPN7 881 aa29.4■■■□□ 2.3
GTF3A-201ENST00000381140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.39■■■□□ 2.34e-8■■■□□ 16.7
GTF3A-201ENST00000381140 WASHC2CQ9Y4E1 1318 aa29.39■■■□□ 2.3
GTF3A-201ENST00000381140 ANKRD50Q9ULJ7 1429 aa29.39■■■□□ 2.29
GTF3A-201ENST00000381140 ZMYM3Q14202 1370 aa29.38■■■□□ 2.29
GTF3A-201ENST00000381140 DEPDC5O75140 1603 aa29.36■■■□□ 2.29
GTF3A-201ENST00000381140 ZC3H13Q5T200 1668 aaKnown RBP29.36■■■□□ 2.29
GTF3A-201ENST00000381140 FAM135AQ9P2D6 1515 aa29.35■■■□□ 2.29
GTF3A-201ENST00000381140 ABCC3O15438 1527 aa29.34■■■□□ 2.29
GTF3A-201ENST00000381140 PRDM15P57071 1507 aaPredicted RBP29.34■■■□□ 2.29
GTF3A-201ENST00000381140 CFAP65Q6ZU64 1925 aaKnown RBP29.33■■■□□ 2.29
GTF3A-201ENST00000381140 SETD1BQ9UPS6 1966 aaKnown RBP29.33■■■□□ 2.29
GTF3A-201ENST00000381140 PREX1Q8TCU6 1659 aa29.31■■■□□ 2.28
GTF3A-201ENST00000381140 CAMSAP1Q5T5Y3 1602 aa29.3■■■□□ 2.28
GTF3A-201ENST00000381140 KANK1Q14678 1352 aa29.29■■■□□ 2.28
GTF3A-201ENST00000381140 GCC2Q8IWJ2 1684 aa29.29■■■□□ 2.28
GTF3A-201ENST00000381140 UNC13BO14795 1591 aa29.24■■■□□ 2.27
GTF3A-201ENST00000381140 PZPP20742 1482 aa29.22■■■□□ 2.27
GTF3A-201ENST00000381140 LMTK3Q96Q04 1460 aa29.22■■■□□ 2.27
GTF3A-201ENST00000381140 NPATQ14207 1427 aa29.22■■■□□ 2.27
GTF3A-201ENST00000381140 NAIPQ13075 1403 aa29.21■■■□□ 2.27
GTF3A-201ENST00000381140 FBXO31Q5XUX0 539 aaPredicted RBP29.21■■■□□ 2.27
GTF3A-201ENST00000381140 VWDEQ8N2E2 1590 aa29.21■■■□□ 2.27
GTF3A-201ENST00000381140 UHRF1BP1Q6BDS2 1440 aa29.2■■■□□ 2.26
GTF3A-201ENST00000381140 MYO3AQ8NEV4 1616 aa29.17■■■□□ 2.26
GTF3A-201ENST00000381140 HFM1A2PYH4 1435 aa29.17■■■□□ 2.26
GTF3A-201ENST00000381140 HSPA2P54652 639 aa29.15■■■□□ 2.26
GTF3A-201ENST00000381140 LMTK2Q8IWU2 1503 aa29.14■■■□□ 2.26
GTF3A-201ENST00000381140 TNRQ92752 1358 aa29.13■■■□□ 2.25
GTF3A-201ENST00000381140 TET3O43151 1660 aa29.13■■■□□ 2.25
GTF3A-201ENST00000381140 IQGAP3Q86VI3 1631 aa29.12■■■□□ 2.25
GTF3A-201ENST00000381140 NUP155O75694 1391 aa29.11■■■□□ 2.25
GTF3A-201ENST00000381140 EFCAB6Q5THR3 1501 aa29.11■■■□□ 2.25
GTF3A-201ENST00000381140 ERVK-7P63135 1459 aa29.1■■■□□ 2.25
GTF3A-201ENST00000381140 SPATA31D1Q6ZQQ2 1576 aa29.09■■■□□ 2.25
GTF3A-201ENST00000381140 ZNF142P52746 1687 aaPredicted RBP29.08■■■□□ 2.25
GTF3A-201ENST00000381140 ARHGAP31Q2M1Z3 1444 aa29.08■■■□□ 2.25
GTF3A-201ENST00000381140 CEP170BQ9Y4F5 1589 aaPredicted RBP29.07■■■□□ 2.24
GTF3A-201ENST00000381140 TRIM52Q96A61 297 aa29.05■■■□□ 2.24
GTF3A-201ENST00000381140 E9PCH4 1651 aa29.04■■■□□ 2.24
GTF3A-201ENST00000381140 A2ML1A8K2U0 1454 aa29.01■■■□□ 2.23
GTF3A-201ENST00000381140 NLRP1Q9C000 1473 aa28.98■■■□□ 2.23
GTF3A-201ENST00000381140 SETD5Q9C0A6 1442 aa28.97■■■□□ 2.23
GTF3A-201ENST00000381140 RPRD2Q5VT52 1461 aaKnown RBP28.97■■■□□ 2.23
GTF3A-201ENST00000381140 SYNMO15061 1565 aa28.96■■■□□ 2.23
GTF3A-201ENST00000381140 STRCQ7RTU9 1775 aa28.94■■■□□ 2.22
GTF3A-201ENST00000381140 UGGT1Q9NYU2 1555 aa28.92■■■□□ 2.22
GTF3A-201ENST00000381140 NOS1P29475 1434 aa28.92■■■□□ 2.22
GTF3A-201ENST00000381140 PIK3C2BO00750 1634 aa28.92■■■□□ 2.22
GTF3A-201ENST00000381140 UBR1Q8IWV7 1749 aa28.9■■■□□ 2.22
GTF3A-201ENST00000381140 RAB3GAP2Q9H2M9 1393 aa28.89■■■□□ 2.22
GTF3A-201ENST00000381140 SPHKAPQ2M3C7 1700 aa28.89■■■□□ 2.22
GTF3A-201ENST00000381140 SLC4A1APQ9BWU0 796 aaKnown RBP28.88■■■□□ 2.21
GTF3A-201ENST00000381140 STAG3Q9UJ98 1225 aa28.86■■■□□ 2.21
GTF3A-201ENST00000381140 IDI1Q13907 227 aa28.85■■■□□ 2.21
GTF3A-201ENST00000381140 THEMISQ8N1K5 641 aaPredicted RBP28.85■■■□□ 2.21
GTF3A-201ENST00000381140 MYO5BQ9ULV0 1848 aa28.84■■■□□ 2.21
GTF3A-201ENST00000381140 PKD2Q13563 968 aa28.84■■■□□ 2.21
GTF3A-201ENST00000381140 POLR1AO95602 1720 aaPredicted RBP28.83■■■□□ 2.21
GTF3A-201ENST00000381140 NCKAP5LQ9HCH0 1330 aa28.83■■■□□ 2.21
GTF3A-201ENST00000381140 PLA2R1Q13018 1463 aa28.82■■■□□ 2.2
GTF3A-201ENST00000381140 SLC52A1Q9NWF4 448 aa28.8■■■□□ 2.2
GTF3A-201ENST00000381140 ADGRB3O60242 1522 aa28.78■■■□□ 2.2
GTF3A-201ENST00000381140 MPHOSPH9Q99550 1183 aa28.77■■■□□ 2.2
GTF3A-201ENST00000381140 KDM5AP29375 1690 aaKnown RBP28.77■■■□□ 2.2
GTF3A-201ENST00000381140 CHGAP10645 457 aaKnown RBP28.76■■■□□ 2.2
GTF3A-201ENST00000381140 FOXD1Q16676 465 aa28.76■■■□□ 2.2
GTF3A-201ENST00000381140 ACIN1Q9UKV3 1341 aaKnown RBP28.75■■■□□ 2.19
GTF3A-201ENST00000381140 DMRT2Q9Y5R5 561 aa28.74■■■□□ 2.19
GTF3A-201ENST00000381140 PTPRTO14522 1441 aa28.73■■■□□ 2.19
GTF3A-201ENST00000381140 TRIM26Q12899 539 aaPredicted RBP28.73■■■□□ 2.19
GTF3A-201ENST00000381140 ANKLE2Q86XL3 938 aa28.73■■■□□ 2.19
GTF3A-201ENST00000381140 TMEM131LA2VDJ0 1609 aa28.72■■■□□ 2.19
GTF3A-201ENST00000381140 CLTCL1P53675 1640 aa28.72■■■□□ 2.19
GTF3A-201ENST00000381140 TRPM2O94759 1503 aa28.72■■■□□ 2.19
GTF3A-201ENST00000381140 NEURL4Q96JN8 1562 aa28.7■■■□□ 2.19
GTF3A-201ENST00000381140 KIF1BO60333 1816 aa28.69■■■□□ 2.18
GTF3A-201ENST00000381140 SLIT1O75093 1534 aa28.68■■■□□ 2.18
GTF3A-201ENST00000381140 TMEM2Q9UHN6 1383 aa28.67■■■□□ 2.18
GTF3A-201ENST00000381140 ARHGAP23Q9P227 1491 aa28.66■■■□□ 2.18
GTF3A-201ENST00000381140 TXNDC2Q86VQ3 553 aa28.65■■■□□ 2.18
GTF3A-201ENST00000381140 SCAF11Q99590 1463 aaKnown RBP28.65■■■□□ 2.18
GTF3A-201ENST00000381140 HRCP23327 699 aa28.64■■■□□ 2.18
GTF3A-201ENST00000381140 EID1Q9Y6B2 187 aa28.64■■■□□ 2.18
GTF3A-201ENST00000381140 IQGAP1P46940 1657 aa28.64■■■□□ 2.18
GTF3A-201ENST00000381140 NPHP4O75161 1426 aaPredicted RBP28.63■■■□□ 2.17
GTF3A-201ENST00000381140 LTKP29376 864 aa28.62■■■□□ 2.17
GTF3A-201ENST00000381140 RIMS2Q9UQ26 1411 aa28.59■■■□□ 2.17
GTF3A-201ENST00000381140 SENP3Q9H4L4 574 aaPredicted RBP28.59■■■□□ 2.17
GTF3A-201ENST00000381140 MED14O60244 1454 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms