RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 MLECQ14165 292 aa28.15■■■□□ 2.1
SMN2-202ENST00000380742 UNC13BO14795 1591 aa28.15■■■□□ 2.1
SMN2-202ENST00000380742 RAB3GAP2Q9H2M9 1393 aa28.13■■■□□ 2.09
SMN2-202ENST00000380742 GGT6Q6P531 493 aa28.13■■■□□ 2.09
SMN2-202ENST00000380742 PRDM15P57071 1507 aaPredicted RBP28.12■■■□□ 2.09
SMN2-202ENST00000380742 ADAMTSL3P82987 1691 aa28.1■■■□□ 2.09
SMN2-202ENST00000380742 FER1L4A9Z1Z3 1794 aa28.08■■■□□ 2.09
SMN2-202ENST00000380742 CEP152O94986 1710 aa28.08■■■□□ 2.09
SMN2-202ENST00000380742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.08■■■□□ 2.09
SMN2-202ENST00000380742 VWDEQ8N2E2 1590 aa28.06■■■□□ 2.08
SMN2-202ENST00000380742 CLTCQ00610 1675 aaKnown RBP28.06■■■□□ 2.08
SMN2-202ENST00000380742 MADDQ8WXG6 1647 aa28.05■■■□□ 2.08
SMN2-202ENST00000380742 ZC3H13Q5T200 1668 aaKnown RBP28.04■■■□□ 2.08
SMN2-202ENST00000380742 IQGAP3Q86VI3 1631 aa28.03■■■□□ 2.08
SMN2-202ENST00000380742 KDM5DQ9BY66 1539 aa28.03■■■□□ 2.08
SMN2-202ENST00000380742 PPP6R1Q9UPN7 881 aa28.01■■■□□ 2.07
SMN2-202ENST00000380742 ABCC3O15438 1527 aa28.01■■■□□ 2.07
SMN2-202ENST00000380742 NUP155O75694 1391 aa28■■■□□ 2.07
SMN2-202ENST00000380742 HRCP23327 699 aa28■■■□□ 2.07
SMN2-202ENST00000380742 FAM135AQ9P2D6 1515 aa28■■■□□ 2.07
SMN2-202ENST00000380742 RIMS1Q86UR5 1692 aaKnown RBP28■■■□□ 2.07
SMN2-202ENST00000380742 KANK1Q14678 1352 aa28■■■□□ 2.07
SMN2-202ENST00000380742 TRIM52Q96A61 297 aa27.99■■■□□ 2.07
SMN2-202ENST00000380742 WASHC2CQ9Y4E1 1318 aa27.98■■■□□ 2.07
SMN2-202ENST00000380742 CAMSAP1Q5T5Y3 1602 aa27.97■■■□□ 2.07
SMN2-202ENST00000380742 MROH2AA6NES4 1674 aa27.97■■■□□ 2.07
SMN2-202ENST00000380742 LMTK2Q8IWU2 1503 aa27.96■■■□□ 2.07
SMN2-202ENST00000380742 TET3O43151 1660 aa27.95■■■□□ 2.07
SMN2-202ENST00000380742 PZPP20742 1482 aa27.95■■■□□ 2.06
SMN2-202ENST00000380742 ESF1Q9H501 851 aaKnown RBP27.94■■■□□ 2.06
SMN2-202ENST00000380742 ACIN1Q9UKV3 1341 aaKnown RBP27.94■■■□□ 2.06
SMN2-202ENST00000380742 CNTLNQ9NXG0 1405 aa27.93■■■□□ 2.06
SMN2-202ENST00000380742 KDM4FA0A1W2PPD8 638 aa27.93■■■□□ 2.06
SMN2-202ENST00000380742 C3P01024 1663 aa27.92■■■□□ 2.06
SMN2-202ENST00000380742 CFAP65Q6ZU64 1925 aaKnown RBP27.91■■■□□ 2.06
SMN2-202ENST00000380742 E9PCH4 1651 aa27.89■■■□□ 2.06
SMN2-202ENST00000380742 EFCAB6Q5THR3 1501 aa27.89■■■□□ 2.06
SMN2-202ENST00000380742 ZMYM3Q14202 1370 aa27.88■■■□□ 2.05
SMN2-202ENST00000380742 MPHOSPH9Q99550 1183 aa27.85■■■□□ 2.05
SMN2-202ENST00000380742 SLC4A1APQ9BWU0 796 aaKnown RBP27.85■■■□□ 2.05
SMN2-202ENST00000380742 PTPRMP28827 1452 aa27.84■■■□□ 2.05
SMN2-202ENST00000380742 ARHGAP31Q2M1Z3 1444 aa27.84■■■□□ 2.05
SMN2-202ENST00000380742 NPATQ14207 1427 aa27.83■■■□□ 2.05
SMN2-202ENST00000380742 CEBPAP49715 358 aaPredicted RBP27.81■■■□□ 2.04
SMN2-202ENST00000380742 PREX1Q8TCU6 1659 aa27.8■■■□□ 2.04
SMN2-202ENST00000380742 PKD2Q13563 968 aa27.79■■■□□ 2.04
SMN2-202ENST00000380742 RPRD2Q5VT52 1461 aaKnown RBP27.78■■■□□ 2.04
SMN2-202ENST00000380742 PLPPR3Q6T4P5 718 aa27.77■■■□□ 2.04
SMN2-202ENST00000380742 FBXO31Q5XUX0 539 aaPredicted RBP27.75■■■□□ 2.03
SMN2-202ENST00000380742 SPHKAPQ2M3C7 1700 aa27.75■■■□□ 2.03
SMN2-202ENST00000380742 FOXD1Q16676 465 aa27.74■■■□□ 2.03
SMN2-202ENST00000380742 SPATA31D1Q6ZQQ2 1576 aa27.74■■■□□ 2.03
SMN2-202ENST00000380742 ERVK-7P63135 1459 aa27.73■■■□□ 2.03
SMN2-202ENST00000380742 DHX57Q6P158 1386 aaKnown RBP27.73■■■□□ 2.03
SMN2-202ENST00000380742 NOS1P29475 1434 aa27.7■■■□□ 2.03
SMN2-202ENST00000380742 SYNMO15061 1565 aa27.69■■■□□ 2.02
SMN2-202ENST00000380742 PTPRTO14522 1441 aa27.68■■■□□ 2.02
SMN2-202ENST00000380742 PLA2R1Q13018 1463 aa27.67■■■□□ 2.02
SMN2-202ENST00000380742 SETD1BQ9UPS6 1966 aaKnown RBP27.67■■■□□ 2.02
SMN2-202ENST00000380742 TRPM2O94759 1503 aa27.64■■■□□ 2.01
SMN2-202ENST00000380742 TNRQ92752 1358 aa27.64■■■□□ 2.01
SMN2-202ENST00000380742 PIK3C2BO00750 1634 aa27.62■■■□□ 2.01
SMN2-202ENST00000380742 UGGT1Q9NYU2 1555 aa27.62■■■□□ 2.01
SMN2-202ENST00000380742 MYO3AQ8NEV4 1616 aa27.61■■■□□ 2.01
SMN2-202ENST00000380742 ANKRD30BQ9BXX2 1392 aa27.6■■■□□ 2.01
SMN2-202ENST00000380742 CLTCL1P53675 1640 aa27.6■■■□□ 2.01
SMN2-202ENST00000380742 IDI1Q13907 227 aa27.54■■■□□ 2
SMN2-202ENST00000380742 NLRP1Q9C000 1473 aa27.53■■■□□ 2
SMN2-202ENST00000380742 KIF1BO60333 1816 aa27.53■■■□□ 2
SMN2-202ENST00000380742 MYO5BQ9ULV0 1848 aa27.53■■■□□ 2
SMN2-202ENST00000380742 SLC52A1Q9NWF4 448 aa27.53■■■□□ 2
SMN2-202ENST00000380742 ZNF142P52746 1687 aaPredicted RBP27.53■■■□□ 2
SMN2-202ENST00000380742 UBR1Q8IWV7 1749 aa27.5■■□□□ 1.99
SMN2-202ENST00000380742 CEP170BQ9Y4F5 1589 aaPredicted RBP27.5■■□□□ 1.99
SMN2-202ENST00000380742 CCDC144AA2RUR9 1427 aa27.5■■□□□ 1.99
SMN2-202ENST00000380742 A2ML1A8K2U0 1454 aa27.48■■□□□ 1.99
SMN2-202ENST00000380742 TMEM131LA2VDJ0 1609 aa27.48■■□□□ 1.99
SMN2-202ENST00000380742 UHRF1BP1Q6BDS2 1440 aa27.48■■□□□ 1.99
SMN2-202ENST00000380742 KDM5AP29375 1690 aaKnown RBP27.48■■□□□ 1.99
SMN2-202ENST00000380742 CCER1Q8TC90 406 aaPredicted RBP27.47■■□□□ 1.99
SMN2-202ENST00000380742 ADGRB3O60242 1522 aa27.46■■□□□ 1.99
SMN2-202ENST00000380742 SIN3AQ96ST3 1273 aa27.44■■□□□ 1.98
SMN2-202ENST00000380742 LMTK3Q96Q04 1460 aa27.41■■□□□ 1.98
SMN2-202ENST00000380742 CHGAP10645 457 aaKnown RBP27.4■■□□□ 1.98
SMN2-202ENST00000380742 SPATA31E1Q6ZUB1 1445 aa27.39■■□□□ 1.97
SMN2-202ENST00000380742 CLSPNQ9HAW4 1339 aa27.38■■□□□ 1.97
SMN2-202ENST00000380742 STAG3Q9UJ98 1225 aa27.38■■□□□ 1.97
SMN2-202ENST00000380742 NEURL4Q96JN8 1562 aa27.38■■□□□ 1.97
SMN2-202ENST00000380742 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
SMN2-202ENST00000380742 NEUROD1Q13562 356 aa27.35■■□□□ 1.97
SMN2-202ENST00000380742 THEMISQ8N1K5 641 aaPredicted RBP27.33■■□□□ 1.97
SMN2-202ENST00000380742 IFT172Q9UG01 1749 aa27.32■■□□□ 1.96
SMN2-202ENST00000380742 PPLO60437 1756 aa27.31■■□□□ 1.96
SMN2-202ENST00000380742 RGL3Q3MIN7 710 aa27.31■■□□□ 1.96
SMN2-202ENST00000380742 SLIT1O75093 1534 aa27.3■■□□□ 1.96
SMN2-202ENST00000380742 ARHGAP23Q9P227 1491 aa27.29■■□□□ 1.96
SMN2-202ENST00000380742 HSPA2P54652 639 aa27.29■■□□□ 1.96
SMN2-202ENST00000380742 ZNF326Q5BKZ1 582 aaKnown RBP27.29■■□□□ 1.96
SMN2-202ENST00000380742 TMEM2Q9UHN6 1383 aa27.28■■□□□ 1.96
SMN2-202ENST00000380742 NEXMIFQ5QGS0 1516 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms