RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 CCER1Q8TC90 406 aaPredicted RBP20.85■□□□□ 0.93
HERPUD1-203ENST00000379792 NUP155O75694 1391 aa20.85■□□□□ 0.93
HERPUD1-203ENST00000379792 DHX57Q6P158 1386 aaKnown RBP20.83■□□□□ 0.93
HERPUD1-203ENST00000379792 GGT6Q6P531 493 aa20.83■□□□□ 0.93
HERPUD1-203ENST00000379792 REREQ9P2R6 1566 aa20.82■□□□□ 0.92
HERPUD1-203ENST00000379792 SIGLEC1Q9BZZ2 1709 aa20.82■□□□□ 0.92
HERPUD1-203ENST00000379792 MPHOSPH9Q99550 1183 aa20.81■□□□□ 0.92
HERPUD1-203ENST00000379792 SLC4A1APQ9BWU0 796 aaKnown RBP20.8■□□□□ 0.92
HERPUD1-203ENST00000379792 EIF2AK4Q9P2K8 1649 aaKnown RBP20.79■□□□□ 0.92
HERPUD1-203ENST00000379792 ACIN1Q9UKV3 1341 aaKnown RBP20.78■□□□□ 0.92
HERPUD1-203ENST00000379792 PZPP20742 1482 aa20.78■□□□□ 0.92
HERPUD1-203ENST00000379792 MLECQ14165 292 aa20.78■□□□□ 0.92
HERPUD1-203ENST00000379792 MADDQ8WXG6 1647 aa20.78■□□□□ 0.92
HERPUD1-203ENST00000379792 UNC13BO14795 1591 aa20.78■□□□□ 0.92
HERPUD1-203ENST00000379792 PTPRMP28827 1452 aa20.77■□□□□ 0.92
HERPUD1-203ENST00000379792 FOXD1Q16676 465 aa20.77■□□□□ 0.91
HERPUD1-203ENST00000379792 AGLP35573 1532 aa20.74■□□□□ 0.91
HERPUD1-203ENST00000379792 KANK1Q14678 1352 aa20.74■□□□□ 0.91
HERPUD1-203ENST00000379792 MROH1Q8NDA8 1641 aa20.74■□□□□ 0.91
HERPUD1-203ENST00000379792 PKD2Q13563 968 aa20.74■□□□□ 0.91
HERPUD1-203ENST00000379792 DEPDC5O75140 1603 aa20.73■□□□□ 0.91
HERPUD1-203ENST00000379792 KDM5DQ9BY66 1539 aa20.73■□□□□ 0.91
HERPUD1-203ENST00000379792 FAM135AQ9P2D6 1515 aa20.73■□□□□ 0.91
HERPUD1-203ENST00000379792 RNF17Q9BXT8 1623 aaKnown RBP20.72■□□□□ 0.91
HERPUD1-203ENST00000379792 PRDM15P57071 1507 aaPredicted RBP20.71■□□□□ 0.91
HERPUD1-203ENST00000379792 RIMS1Q86UR5 1692 aaKnown RBP20.71■□□□□ 0.91
HERPUD1-203ENST00000379792 WASHC2CQ9Y4E1 1318 aa20.7■□□□□ 0.9
HERPUD1-203ENST00000379792 FER1L4A9Z1Z3 1794 aa20.69■□□□□ 0.9
HERPUD1-203ENST00000379792 IQGAP3Q86VI3 1631 aa20.69■□□□□ 0.9
HERPUD1-203ENST00000379792 VWDEQ8N2E2 1590 aa20.68■□□□□ 0.9
HERPUD1-203ENST00000379792 SIN3AQ96ST3 1273 aa20.64■□□□□ 0.89
HERPUD1-203ENST00000379792 ABCC3O15438 1527 aa20.64■□□□□ 0.89
HERPUD1-203ENST00000379792 CEP152O94986 1710 aa20.63■□□□□ 0.89
HERPUD1-203ENST00000379792 ESF1Q9H501 851 aaKnown RBP20.61■□□□□ 0.89
HERPUD1-203ENST00000379792 PPP6R1Q9UPN7 881 aa20.61■□□□□ 0.89
HERPUD1-203ENST00000379792 NEUROD1Q13562 356 aa20.6■□□□□ 0.89
HERPUD1-203ENST00000379792 LMTK2Q8IWU2 1503 aa20.6■□□□□ 0.89
HERPUD1-203ENST00000379792 ANKRD30BQ9BXX2 1392 aa20.59■□□□□ 0.89
HERPUD1-203ENST00000379792 TET3O43151 1660 aa20.59■□□□□ 0.89
HERPUD1-203ENST00000379792 CLSPNQ9HAW4 1339 aa20.59■□□□□ 0.89
HERPUD1-203ENST00000379792 E9PCH4 1651 aa20.57■□□□□ 0.88
HERPUD1-203ENST00000379792 EFCAB6Q5THR3 1501 aa20.57■□□□□ 0.88
HERPUD1-203ENST00000379792 CNTLNQ9NXG0 1405 aa20.57■□□□□ 0.88
HERPUD1-203ENST00000379792 NPATQ14207 1427 aa20.55■□□□□ 0.88
HERPUD1-203ENST00000379792 CLTCQ00610 1675 aaKnown RBP20.55■□□□□ 0.88
HERPUD1-203ENST00000379792 CAMSAP1Q5T5Y3 1602 aa20.55■□□□□ 0.88
HERPUD1-203ENST00000379792 PLA2R1Q13018 1463 aa20.55■□□□□ 0.88
HERPUD1-203ENST00000379792 ZC3H13Q5T200 1668 aaKnown RBP20.54■□□□□ 0.88
HERPUD1-203ENST00000379792 FBXO31Q5XUX0 539 aaPredicted RBP20.53■□□□□ 0.88
HERPUD1-203ENST00000379792 ZMYM3Q14202 1370 aa20.52■□□□□ 0.88
HERPUD1-203ENST00000379792 PLPPR3Q6T4P5 718 aa20.51■□□□□ 0.87
HERPUD1-203ENST00000379792 LMTK3Q96Q04 1460 aa20.51■□□□□ 0.87
HERPUD1-203ENST00000379792 MROH2AA6NES4 1674 aa20.51■□□□□ 0.87
HERPUD1-203ENST00000379792 ARHGAP31Q2M1Z3 1444 aa20.5■□□□□ 0.87
HERPUD1-203ENST00000379792 C3P01024 1663 aa20.5■□□□□ 0.87
HERPUD1-203ENST00000379792 CFAP65Q6ZU64 1925 aaKnown RBP20.5■□□□□ 0.87
HERPUD1-203ENST00000379792 CEBPAP49715 358 aaPredicted RBP20.49■□□□□ 0.87
HERPUD1-203ENST00000379792 RPRD2Q5VT52 1461 aaKnown RBP20.49■□□□□ 0.87
HERPUD1-203ENST00000379792 PTPRTO14522 1441 aa20.49■□□□□ 0.87
HERPUD1-203ENST00000379792 SETD1BQ9UPS6 1966 aaKnown RBP20.46■□□□□ 0.87
HERPUD1-203ENST00000379792 CCDC144AA2RUR9 1427 aa20.46■□□□□ 0.87
HERPUD1-203ENST00000379792 PREX1Q8TCU6 1659 aa20.46■□□□□ 0.87
HERPUD1-203ENST00000379792 SPHKAPQ2M3C7 1700 aa20.45■□□□□ 0.86
HERPUD1-203ENST00000379792 UGGT1Q9NYU2 1555 aa20.44■□□□□ 0.86
HERPUD1-203ENST00000379792 NOS1P29475 1434 aa20.44■□□□□ 0.86
HERPUD1-203ENST00000379792 TRPM2O94759 1503 aa20.43■□□□□ 0.86
HERPUD1-203ENST00000379792 ERVK-7P63135 1459 aa20.42■□□□□ 0.86
HERPUD1-203ENST00000379792 ZEB1P37275 1124 aaPredicted RBP20.42■□□□□ 0.86
HERPUD1-203ENST00000379792 UHRF1BP1Q6BDS2 1440 aa20.41■□□□□ 0.86
HERPUD1-203ENST00000379792 SYNMO15061 1565 aa20.4■□□□□ 0.86
HERPUD1-203ENST00000379792 CLTCL1P53675 1640 aa20.4■□□□□ 0.86
HERPUD1-203ENST00000379792 TONSLQ96HA7 1378 aa20.4■□□□□ 0.86
HERPUD1-203ENST00000379792 RGL3Q3MIN7 710 aa20.39■□□□□ 0.86
HERPUD1-203ENST00000379792 CHGAP10645 457 aaKnown RBP20.39■□□□□ 0.85
HERPUD1-203ENST00000379792 IDI1Q13907 227 aa20.39■□□□□ 0.85
HERPUD1-203ENST00000379792 L3MBTL2Q969R5 705 aa20.38■□□□□ 0.85
HERPUD1-203ENST00000379792 SPATA31D1Q6ZQQ2 1576 aa20.36■□□□□ 0.85
HERPUD1-203ENST00000379792 HSPA2P54652 639 aa20.36■□□□□ 0.85
HERPUD1-203ENST00000379792 TNRQ92752 1358 aa20.36■□□□□ 0.85
HERPUD1-203ENST00000379792 SLC52A1Q9NWF4 448 aa20.35■□□□□ 0.85
HERPUD1-203ENST00000379792 TIMELESSQ9UNS1 1208 aa20.33■□□□□ 0.84
HERPUD1-203ENST00000379792 SPATA31E1Q6ZUB1 1445 aa20.32■□□□□ 0.84
HERPUD1-203ENST00000379792 KDM2AQ9Y2K7 1162 aa20.31■□□□□ 0.84
HERPUD1-203ENST00000379792 PIK3C2BO00750 1634 aa20.31■□□□□ 0.84
HERPUD1-203ENST00000379792 DCAF11Q8TEB1 546 aa20.3■□□□□ 0.84
HERPUD1-203ENST00000379792 ZNF326Q5BKZ1 582 aaKnown RBP20.29■□□□□ 0.84
HERPUD1-203ENST00000379792 STAG3Q9UJ98 1225 aa20.29■□□□□ 0.84
HERPUD1-203ENST00000379792 PPP1R15AO75807 674 aaPredicted RBP20.29■□□□□ 0.84
HERPUD1-203ENST00000379792 MYO3AQ8NEV4 1616 aa20.27■□□□□ 0.84
HERPUD1-203ENST00000379792 ZNF142P52746 1687 aaPredicted RBP20.26■□□□□ 0.83
HERPUD1-203ENST00000379792 KIF1BO60333 1816 aa20.26■□□□□ 0.83
HERPUD1-203ENST00000379792 ADGRB3O60242 1522 aa20.25■□□□□ 0.83
HERPUD1-203ENST00000379792 CEP170BQ9Y4F5 1589 aaPredicted RBP20.23■□□□□ 0.83
HERPUD1-203ENST00000379792 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
HERPUD1-203ENST00000379792 TMEM131LA2VDJ0 1609 aa20.22■□□□□ 0.83
HERPUD1-203ENST00000379792 STRCQ7RTU9 1775 aa20.22■□□□□ 0.83
HERPUD1-203ENST00000379792 NBPF8Q3BBV2 869 aa20.22■□□□□ 0.83
HERPUD1-203ENST00000379792 DMRT2Q9Y5R5 561 aa20.22■□□□□ 0.83
HERPUD1-203ENST00000379792 NLRP1Q9C000 1473 aa20.22■□□□□ 0.83
HERPUD1-203ENST00000379792 A2ML1A8K2U0 1454 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms