RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 DEKP35659 375 aaKnown RBP19.13■□□□□ 0.65
SNCAIP-203ENST00000379538 KIF13AQ9H1H9 1805 aa19.12■□□□□ 0.65
SNCAIP-203ENST00000379538 B4GALNT3Q6L9W6 998 aa19.12■□□□□ 0.65
SNCAIP-203ENST00000379538 SHANK2Q9UPX8 1470 aa19.12■□□□□ 0.65
SNCAIP-203ENST00000379538 CCDC184Q52MB2 194 aa19.12■□□□□ 0.65
SNCAIP-203ENST00000379538 PZPP20742 1482 aa19.11■□□□□ 0.65
SNCAIP-203ENST00000379538 NBR1Q14596 966 aa19.1■□□□□ 0.65
SNCAIP-203ENST00000379538 TSPOAP1O95153 1857 aa19.07■□□□□ 0.64
SNCAIP-203ENST00000379538 TONSLQ96HA7 1378 aa19.06■□□□□ 0.64
SNCAIP-203ENST00000379538 KIF3BO15066 747 aa19.05■□□□□ 0.64
SNCAIP-203ENST00000379538 NEO1Q92859 1461 aa19.05■□□□□ 0.64
SNCAIP-203ENST00000379538 MAST1Q9Y2H9 1570 aa19.05■□□□□ 0.64
SNCAIP-203ENST00000379538 PAK3O75914 559 aaPredicted RBP19.04■□□□□ 0.64
SNCAIP-203ENST00000379538 PPRC1Q5VV67 1664 aaKnown RBP19.04■□□□□ 0.64
SNCAIP-203ENST00000379538 ANKRD30BQ9BXX2 1392 aa19.04■□□□□ 0.64
SNCAIP-203ENST00000379538 L3MBTL2Q969R5 705 aa19.03■□□□□ 0.64
SNCAIP-203ENST00000379538 SENP3-EIF4A1A0A087X0R7 540 aa19.01■□□□□ 0.63
SNCAIP-203ENST00000379538 ZFYVE16Q7Z3T8 1539 aa19.01■□□□□ 0.63
SNCAIP-203ENST00000379538 PRKCSHP14314 528 aaPredicted RBP19■□□□□ 0.63
SNCAIP-203ENST00000379538 FAM9BQ8IZU0 186 aa19■□□□□ 0.63
SNCAIP-203ENST00000379538 TEX14Q8IWB6 1497 aa19■□□□□ 0.63
SNCAIP-203ENST00000379538 ZNF326Q5BKZ1 582 aaKnown RBP19■□□□□ 0.63
SNCAIP-203ENST00000379538 GGT6Q6P531 493 aa18.99■□□□□ 0.63
SNCAIP-203ENST00000379538 PPP4R2Q9NY27 417 aa18.99■□□□□ 0.63
SNCAIP-203ENST00000379538 TIMELESSQ9UNS1 1208 aa18.98■□□□□ 0.63
SNCAIP-203ENST00000379538 ATP7AQ04656 1500 aa18.98■□□□□ 0.63
SNCAIP-203ENST00000379538 CNGB1Q14028 1251 aaPredicted RBP18.97■□□□□ 0.63
SNCAIP-203ENST00000379538 RGL3Q3MIN7 710 aa18.96■□□□□ 0.63
SNCAIP-203ENST00000379538 WASHC2AQ641Q2 1341 aa18.96■□□□□ 0.63
SNCAIP-203ENST00000379538 POGZQ7Z3K3 1410 aa18.95■□□□□ 0.62
SNCAIP-203ENST00000379538 TRHP20396 242 aaPredicted RBP18.95■□□□□ 0.62
SNCAIP-203ENST00000379538 FAM135AQ9P2D6 1515 aa18.95■□□□□ 0.62
SNCAIP-203ENST00000379538 KDM2AQ9Y2K7 1162 aa18.94■□□□□ 0.62
SNCAIP-203ENST00000379538 ZNF518AQ6AHZ1 1483 aa18.94■□□□□ 0.62
SNCAIP-203ENST00000379538 DUOX2Q9NRD8 1548 aa18.94■□□□□ 0.62
SNCAIP-203ENST00000379538 PLXNC1O60486 1568 aa18.94■□□□□ 0.62
SNCAIP-203ENST00000379538 YEATS2Q9ULM3 1422 aa18.93■□□□□ 0.62
SNCAIP-203ENST00000379538 NBPF8Q3BBV2 869 aa18.93■□□□□ 0.62
SNCAIP-203ENST00000379538 ANO8Q9HCE9 1232 aaPredicted RBP18.93■□□□□ 0.62
SNCAIP-203ENST00000379538 KIDINS220Q9ULH0 1771 aa18.93■□□□□ 0.62
SNCAIP-203ENST00000379538 HSPA5P11021 654 aaKnown RBP18.92■□□□□ 0.62
SNCAIP-203ENST00000379538 KDM5CP41229 1560 aa18.92■□□□□ 0.62
SNCAIP-203ENST00000379538 RTEL1-TNFRSF6BF6WH68 1400 aa18.91■□□□□ 0.62
SNCAIP-203ENST00000379538 NOP58Q9Y2X3 529 aaKnown RBP18.9■□□□□ 0.62
SNCAIP-203ENST00000379538 INO80Q9ULG1 1556 aaPredicted RBP18.9■□□□□ 0.62
SNCAIP-203ENST00000379538 DHX29Q7Z478 1369 aaKnown RBP18.9■□□□□ 0.62
SNCAIP-203ENST00000379538 COL17A1Q9UMD9 1497 aaPredicted RBP18.9■□□□□ 0.62
SNCAIP-203ENST00000379538 RICTORQ6R327 1708 aa18.9■□□□□ 0.62
SNCAIP-203ENST00000379538 ERBINQ96RT1 1412 aa18.89■□□□□ 0.61
SNCAIP-203ENST00000379538 C11orf95C9JLR9 678 aaPredicted RBP18.88■□□□□ 0.61
SNCAIP-203ENST00000379538 RPRD2Q5VT52 1461 aaKnown RBP18.88■□□□□ 0.61
SNCAIP-203ENST00000379538 ZMYM4Q5VZL5 1548 aa18.88■□□□□ 0.61
SNCAIP-203ENST00000379538 PLA2R1Q13018 1463 aa18.86■□□□□ 0.61
SNCAIP-203ENST00000379538 MLECQ14165 292 aa18.86■□□□□ 0.61
SNCAIP-203ENST00000379538 DCAF11Q8TEB1 546 aa18.85■□□□□ 0.61
SNCAIP-203ENST00000379538 MRS2Q9HD23 443 aa18.85■□□□□ 0.61
SNCAIP-203ENST00000379538 A2MP01023 1474 aa18.85■□□□□ 0.61
SNCAIP-203ENST00000379538 SENP3Q9H4L4 574 aaPredicted RBP18.83■□□□□ 0.6
SNCAIP-203ENST00000379538 KDM5DQ9BY66 1539 aa18.82■□□□□ 0.6
SNCAIP-203ENST00000379538 UNC13BO14795 1591 aa18.82■□□□□ 0.6
SNCAIP-203ENST00000379538 HECW2Q9P2P5 1572 aa18.82■□□□□ 0.6
SNCAIP-203ENST00000379538 ABCA6Q8N139 1617 aa18.82■□□□□ 0.6
SNCAIP-203ENST00000379538 BCORL1Q5H9F3 1711 aa18.82■□□□□ 0.6
SNCAIP-203ENST00000379538 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
SNCAIP-203ENST00000379538 FRMPD1Q5SYB0 1578 aa18.82■□□□□ 0.6
SNCAIP-203ENST00000379538 CFAP65Q6ZU64 1925 aaKnown RBP18.81■□□□□ 0.6
SNCAIP-203ENST00000379538 RTN4Q9NQC3 1192 aaKnown RBP18.81■□□□□ 0.6
SNCAIP-203ENST00000379538 MAGI2Q86UL8 1455 aa18.8■□□□□ 0.6
SNCAIP-203ENST00000379538 EIF2AK4Q9P2K8 1649 aaKnown RBP18.8■□□□□ 0.6
SNCAIP-203ENST00000379538 WASHC2CQ9Y4E1 1318 aa18.79■□□□□ 0.6
SNCAIP-203ENST00000379538 PRKRIP1Q9H875 184 aaPredicted RBP18.79■□□□□ 0.6
SNCAIP-203ENST00000379538 SALL2Q9Y467 1007 aaPredicted RBP18.79■□□□□ 0.6
SNCAIP-203ENST00000379538 CCDC144AA2RUR9 1427 aa18.79■□□□□ 0.6
SNCAIP-203ENST00000379538 REREQ9P2R6 1566 aa18.78■□□□□ 0.6
SNCAIP-203ENST00000379538 IL27Q8NEV9 243 aa18.78■□□□□ 0.6
SNCAIP-203ENST00000379538 ERICH6BQ5W0A0 696 aa18.77■□□□□ 0.6
SNCAIP-203ENST00000379538 IQGAP3Q86VI3 1631 aa18.77■□□□□ 0.6
SNCAIP-203ENST00000379538 MROH1Q8NDA8 1641 aa18.75■□□□□ 0.59
SNCAIP-203ENST00000379538 KANK1Q14678 1352 aa18.75■□□□□ 0.59
SNCAIP-203ENST00000379538 UGGT1Q9NYU2 1555 aa18.75■□□□□ 0.59
SNCAIP-203ENST00000379538 CCDC136Q96JN2 1154 aa18.75■□□□□ 0.59
SNCAIP-203ENST00000379538 DIP2CQ9Y2E4 1556 aa18.74■□□□□ 0.59
SNCAIP-203ENST00000379538 CHGAP10645 457 aaKnown RBP18.74■□□□□ 0.59
SNCAIP-203ENST00000379538 EIF4G2P78344 907 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNCAIP-203ENST00000379538 E9PCH4 1651 aa18.73■□□□□ 0.59
SNCAIP-203ENST00000379538 ZBED9Q6R2W3 1325 aa18.72■□□□□ 0.59
SNCAIP-203ENST00000379538 ATP10AO60312 1499 aa18.71■□□□□ 0.59
SNCAIP-203ENST00000379538 NUTM2DQ5VT03 806 aaPredicted RBP18.71■□□□□ 0.59
SNCAIP-203ENST00000379538 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
SNCAIP-203ENST00000379538 NBPF1Q3BBV0 1214 aa18.7■□□□□ 0.58
SNCAIP-203ENST00000379538 NPM2Q86SE8 214 aaKnown RBP18.7■□□□□ 0.58
SNCAIP-203ENST00000379538 DEPDC5O75140 1603 aa18.7■□□□□ 0.58
SNCAIP-203ENST00000379538 FBXO31Q5XUX0 539 aaPredicted RBP18.7■□□□□ 0.58
SNCAIP-203ENST00000379538 IPO9Q96P70 1041 aaKnown RBP18.69■□□□□ 0.58
SNCAIP-203ENST00000379538 CNTLNQ9NXG0 1405 aa18.69■□□□□ 0.58
SNCAIP-203ENST00000379538 ARID4BQ4LE39 1312 aaPredicted RBP18.69■□□□□ 0.58
SNCAIP-203ENST00000379538 CEP152O94986 1710 aa18.68■□□□□ 0.58
SNCAIP-203ENST00000379538 ARHGEF40Q8TER5 1519 aa18.68■□□□□ 0.58
SNCAIP-203ENST00000379538 POLR3GLQ9BT43 218 aa18.68■□□□□ 0.58
SNCAIP-203ENST00000379538 ANP32AP39687 249 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms