RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 RNF17Q9BXT8 1623 aaKnown RBP23.36■■□□□ 1.33
CCDC107-204ENST00000378409 SIGLEC1Q9BZZ2 1709 aa23.36■■□□□ 1.33
CCDC107-204ENST00000378409 KIF3BO15066 747 aa23.34■■□□□ 1.33
CCDC107-204ENST00000378409 KDM5DQ9BY66 1539 aa23.33■■□□□ 1.32
CCDC107-204ENST00000378409 DHX57Q6P158 1386 aaKnown RBP23.32■■□□□ 1.32
CCDC107-204ENST00000378409 IQGAP3Q86VI3 1631 aa23.32■■□□□ 1.32
CCDC107-204ENST00000378409 NUP155O75694 1391 aa23.31■■□□□ 1.32
CCDC107-204ENST00000378409 MROH1Q8NDA8 1641 aa23.31■■□□□ 1.32
CCDC107-204ENST00000378409 PRDM15P57071 1507 aaPredicted RBP23.3■■□□□ 1.32
CCDC107-204ENST00000378409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.3■■□□□ 1.32
CCDC107-204ENST00000378409 AGLP35573 1532 aa23.29■■□□□ 1.32
CCDC107-204ENST00000378409 CCER1Q8TC90 406 aaPredicted RBP23.29■■□□□ 1.32
CCDC107-204ENST00000378409 PZPP20742 1482 aa23.29■■□□□ 1.32
CCDC107-204ENST00000378409 FAM135AQ9P2D6 1515 aa23.28■■□□□ 1.32
CCDC107-204ENST00000378409 KDM4FA0A1W2PPD8 638 aa23.27■■□□□ 1.32
CCDC107-204ENST00000378409 CEP152O94986 1710 aa23.27■■□□□ 1.32
CCDC107-204ENST00000378409 KANK1Q14678 1352 aa23.25■■□□□ 1.31
CCDC107-204ENST00000378409 VWDEQ8N2E2 1590 aa23.24■■□□□ 1.31
CCDC107-204ENST00000378409 MPHOSPH9Q99550 1183 aa23.24■■□□□ 1.31
CCDC107-204ENST00000378409 SLC4A1APQ9BWU0 796 aaKnown RBP23.24■■□□□ 1.31
CCDC107-204ENST00000378409 GGT6Q6P531 493 aa23.23■■□□□ 1.31
CCDC107-204ENST00000378409 TET3O43151 1660 aa23.22■■□□□ 1.31
CCDC107-204ENST00000378409 ZC3H13Q5T200 1668 aaKnown RBP23.21■■□□□ 1.31
CCDC107-204ENST00000378409 ARID4BQ4LE39 1312 aaPredicted RBP23.2■■□□□ 1.3
CCDC107-204ENST00000378409 E9PCH4 1651 aa23.17■■□□□ 1.3
CCDC107-204ENST00000378409 ABCC3O15438 1527 aa23.17■■□□□ 1.3
CCDC107-204ENST00000378409 CAMSAP1Q5T5Y3 1602 aa23.16■■□□□ 1.3
CCDC107-204ENST00000378409 LMTK2Q8IWU2 1503 aa23.15■■□□□ 1.3
CCDC107-204ENST00000378409 PKD2Q13563 968 aa23.15■■□□□ 1.3
CCDC107-204ENST00000378409 MLECQ14165 292 aa23.15■■□□□ 1.3
CCDC107-204ENST00000378409 CLTCQ00610 1675 aaKnown RBP23.15■■□□□ 1.3
CCDC107-204ENST00000378409 EFCAB6Q5THR3 1501 aa23.13■■□□□ 1.29
CCDC107-204ENST00000378409 WASHC2CQ9Y4E1 1318 aa23.13■■□□□ 1.29
CCDC107-204ENST00000378409 FOXD1Q16676 465 aa23.13■■□□□ 1.29
CCDC107-204ENST00000378409 CFAP65Q6ZU64 1925 aaKnown RBP23.13■■□□□ 1.29
CCDC107-204ENST00000378409 CLSPNQ9HAW4 1339 aa23.1■■□□□ 1.29
CCDC107-204ENST00000378409 FER1L4A9Z1Z3 1794 aa23.1■■□□□ 1.29
CCDC107-204ENST00000378409 SPHKAPQ2M3C7 1700 aa23.09■■□□□ 1.29
CCDC107-204ENST00000378409 PPP6R1Q9UPN7 881 aa23.08■■□□□ 1.29
CCDC107-204ENST00000378409 ANKRD30BQ9BXX2 1392 aa23.04■■□□□ 1.28
CCDC107-204ENST00000378409 ESF1Q9H501 851 aaKnown RBP23.04■■□□□ 1.28
CCDC107-204ENST00000378409 MROH2AA6NES4 1674 aa23.03■■□□□ 1.28
CCDC107-204ENST00000378409 RPRD2Q5VT52 1461 aaKnown RBP23.03■■□□□ 1.28
CCDC107-204ENST00000378409 NPATQ14207 1427 aa23.01■■□□□ 1.27
CCDC107-204ENST00000378409 PREX1Q8TCU6 1659 aa23■■□□□ 1.27
CCDC107-204ENST00000378409 MADDQ8WXG6 1647 aa23■■□□□ 1.27
CCDC107-204ENST00000378409 ARHGAP31Q2M1Z3 1444 aa22.99■■□□□ 1.27
CCDC107-204ENST00000378409 CNTLNQ9NXG0 1405 aa22.99■■□□□ 1.27
CCDC107-204ENST00000378409 SIN3AQ96ST3 1273 aa22.99■■□□□ 1.27
CCDC107-204ENST00000378409 ADAMTSL3P82987 1691 aa22.99■■□□□ 1.27
CCDC107-204ENST00000378409 RIMS1Q86UR5 1692 aaKnown RBP22.98■■□□□ 1.27
CCDC107-204ENST00000378409 TRPM2O94759 1503 aa22.98■■□□□ 1.27
CCDC107-204ENST00000378409 NEUROD1Q13562 356 aa22.97■■□□□ 1.27
CCDC107-204ENST00000378409 PLA2R1Q13018 1463 aa22.97■■□□□ 1.27
CCDC107-204ENST00000378409 PTPRTO14522 1441 aa22.96■■□□□ 1.27
CCDC107-204ENST00000378409 C3P01024 1663 aa22.95■■□□□ 1.26
CCDC107-204ENST00000378409 CLTCL1P53675 1640 aa22.94■■□□□ 1.26
CCDC107-204ENST00000378409 CCDC144AA2RUR9 1427 aa22.93■■□□□ 1.26
CCDC107-204ENST00000378409 ZMYM3Q14202 1370 aa22.92■■□□□ 1.26
CCDC107-204ENST00000378409 SYNMO15061 1565 aa22.92■■□□□ 1.26
CCDC107-204ENST00000378409 KIF1BO60333 1816 aa22.92■■□□□ 1.26
CCDC107-204ENST00000378409 ZEB1P37275 1124 aaPredicted RBP22.91■■□□□ 1.26
CCDC107-204ENST00000378409 ERVK-7P63135 1459 aa22.91■■□□□ 1.26
CCDC107-204ENST00000378409 NOS1P29475 1434 aa22.91■■□□□ 1.26
CCDC107-204ENST00000378409 UGGT1Q9NYU2 1555 aa22.9■■□□□ 1.26
CCDC107-204ENST00000378409 SPATA31D1Q6ZQQ2 1576 aa22.89■■□□□ 1.25
CCDC107-204ENST00000378409 ILDR1Q86SU0 546 aaPredicted RBP22.88■■□□□ 1.25
CCDC107-204ENST00000378409 PIK3C2BO00750 1634 aa22.88■■□□□ 1.25
CCDC107-204ENST00000378409 FBXO31Q5XUX0 539 aaPredicted RBP22.87■■□□□ 1.25
CCDC107-204ENST00000378409 TONSLQ96HA7 1378 aa22.86■■□□□ 1.25
CCDC107-204ENST00000378409 CEBPAP49715 358 aaPredicted RBP22.82■■□□□ 1.24
CCDC107-204ENST00000378409 PLPPR3Q6T4P5 718 aa22.82■■□□□ 1.24
CCDC107-204ENST00000378409 MYO5BQ9ULV0 1848 aa22.82■■□□□ 1.24
CCDC107-204ENST00000378409 TIMELESSQ9UNS1 1208 aa22.79■■□□□ 1.24
CCDC107-204ENST00000378409 TNRQ92752 1358 aa22.78■■□□□ 1.24
CCDC107-204ENST00000378409 SLC52A1Q9NWF4 448 aa22.77■■□□□ 1.24
CCDC107-204ENST00000378409 NEURL4Q96JN8 1562 aa22.76■■□□□ 1.23
CCDC107-204ENST00000378409 SPATA31E1Q6ZUB1 1445 aa22.76■■□□□ 1.23
CCDC107-204ENST00000378409 ADGRB3O60242 1522 aa22.76■■□□□ 1.23
CCDC107-204ENST00000378409 PTPRMP28827 1452 aa22.75■■□□□ 1.23
CCDC107-204ENST00000378409 CHGAP10645 457 aaKnown RBP22.74■■□□□ 1.23
CCDC107-204ENST00000378409 IDI1Q13907 227 aa22.74■■□□□ 1.23
CCDC107-204ENST00000378409 RGL3Q3MIN7 710 aa22.74■■□□□ 1.23
CCDC107-204ENST00000378409 L3MBTL2Q969R5 705 aa22.74■■□□□ 1.23
CCDC107-204ENST00000378409 TMEM131LA2VDJ0 1609 aa22.74■■□□□ 1.23
CCDC107-204ENST00000378409 MYO3AQ8NEV4 1616 aa22.73■■□□□ 1.23
CCDC107-204ENST00000378409 IFT172Q9UG01 1749 aa22.72■■□□□ 1.23
CCDC107-204ENST00000378409 SETD1BQ9UPS6 1966 aaKnown RBP22.72■■□□□ 1.23
CCDC107-204ENST00000378409 NLRP1Q9C000 1473 aa22.7■■□□□ 1.22
CCDC107-204ENST00000378409 KDM5AP29375 1690 aaKnown RBP22.7■■□□□ 1.22
CCDC107-204ENST00000378409 UBR1Q8IWV7 1749 aa22.7■■□□□ 1.22
CCDC107-204ENST00000378409 PPLO60437 1756 aa22.7■■□□□ 1.22
CCDC107-204ENST00000378409 ZNF326Q5BKZ1 582 aaKnown RBP22.67■■□□□ 1.22
CCDC107-204ENST00000378409 DCAF11Q8TEB1 546 aa22.67■■□□□ 1.22
CCDC107-204ENST00000378409 STAG3Q9UJ98 1225 aa22.67■■□□□ 1.22
CCDC107-204ENST00000378409 PPP1R15AO75807 674 aaPredicted RBP22.66■■□□□ 1.22
CCDC107-204ENST00000378409 KDM2AQ9Y2K7 1162 aa22.64■■□□□ 1.21
CCDC107-204ENST00000378409 A2ML1A8K2U0 1454 aa22.64■■□□□ 1.21
CCDC107-204ENST00000378409 ZNF142P52746 1687 aaPredicted RBP22.64■■□□□ 1.21
CCDC107-204ENST00000378409 CEP170BQ9Y4F5 1589 aaPredicted RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms