RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 CNTLNQ9NXG0 1405 aa31.43■■■□□ 2.62
TRIM13-203ENST00000378183 RNF17Q9BXT8 1623 aaKnown RBP31.43■■■□□ 2.62
TRIM13-203ENST00000378183 ESF1Q9H501 851 aaKnown RBP31.43■■■□□ 2.62
TRIM13-203ENST00000378183 MROH2AA6NES4 1674 aa31.43■■■□□ 2.62
TRIM13-203ENST00000378183 PPP6R1Q9UPN7 881 aa31.41■■■□□ 2.62
TRIM13-203ENST00000378183 ERBINQ96RT1 1412 aa31.4■■■□□ 2.62
TRIM13-203ENST00000378183 MROH1Q8NDA8 1641 aa31.38■■■□□ 2.61
TRIM13-203ENST00000378183 ITGAEP38570 1179 aa31.37■■■□□ 2.61
TRIM13-203ENST00000378183 ZMYM3Q14202 1370 aa31.35■■■□□ 2.61
TRIM13-203ENST00000378183 ROCK1Q13464 1354 aa31.33■■■□□ 2.61
TRIM13-203ENST00000378183 KDM5DQ9BY66 1539 aa31.33■■■□□ 2.61
TRIM13-203ENST00000378183 FAM135AQ9P2D6 1515 aa31.32■■■□□ 2.6
TRIM13-203ENST00000378183 DEPDC5O75140 1603 aa31.31■■■□□ 2.6
TRIM13-203ENST00000378183 WASHC2CQ9Y4E1 1318 aa31.28■■■□□ 2.6
TRIM13-203ENST00000378183 SETD1BQ9UPS6 1966 aaKnown RBP31.27■■■□□ 2.6
TRIM13-203ENST00000378183 ANKRD50Q9ULJ7 1429 aa31.27■■■□□ 2.6
TRIM13-203ENST00000378183 PRDM15P57071 1507 aaPredicted RBP31.27■■■□□ 2.6
TRIM13-203ENST00000378183 ABCC3O15438 1527 aa31.26■■■□□ 2.59
TRIM13-203ENST00000378183 CEP152O94986 1710 aa31.26■■■□□ 2.59
TRIM13-203ENST00000378183 LMTK3Q96Q04 1460 aa31.26■■■□□ 2.59
TRIM13-203ENST00000378183 ZC3H13Q5T200 1668 aaKnown RBP31.25■■■□□ 2.59
TRIM13-203ENST00000378183 PREX1Q8TCU6 1659 aa31.25■■■□□ 2.59
TRIM13-203ENST00000378183 NPATQ14207 1427 aa31.21■■■□□ 2.59
TRIM13-203ENST00000378183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.19■■■□□ 2.58
TRIM13-203ENST00000378183 VWDEQ8N2E2 1590 aa31.18■■■□□ 2.58
TRIM13-203ENST00000378183 CAMSAP1Q5T5Y3 1602 aa31.17■■■□□ 2.58
TRIM13-203ENST00000378183 PZPP20742 1482 aa31.17■■■□□ 2.58
TRIM13-203ENST00000378183 FBXO31Q5XUX0 539 aaPredicted RBP31.14■■■□□ 2.58
TRIM13-203ENST00000378183 UNC13BO14795 1591 aa31.13■■■□□ 2.57
TRIM13-203ENST00000378183 KANK1Q14678 1352 aa31.12■■■□□ 2.57
TRIM13-203ENST00000378183 UHRF1BP1Q6BDS2 1440 aa31.12■■■□□ 2.57
TRIM13-203ENST00000378183 GCC2Q8IWJ2 1684 aa31.1■■■□□ 2.57
TRIM13-203ENST00000378183 LMTK2Q8IWU2 1503 aa31.1■■■□□ 2.57
TRIM13-203ENST00000378183 CFAP65Q6ZU64 1925 aaKnown RBP31.1■■■□□ 2.57
TRIM13-203ENST00000378183 NAIPQ13075 1403 aa31.09■■■□□ 2.57
TRIM13-203ENST00000378183 HSPA2P54652 639 aa31.09■■■□□ 2.57
TRIM13-203ENST00000378183 MYO3AQ8NEV4 1616 aa31.09■■■□□ 2.57
TRIM13-203ENST00000378183 ARHGAP31Q2M1Z3 1444 aa31.06■■■□□ 2.56
TRIM13-203ENST00000378183 HFM1A2PYH4 1435 aa31.04■■■□□ 2.56
TRIM13-203ENST00000378183 SPATA31D1Q6ZQQ2 1576 aa31.04■■■□□ 2.56
TRIM13-203ENST00000378183 TNRQ92752 1358 aa31.03■■■□□ 2.56
TRIM13-203ENST00000378183 ZNF142P52746 1687 aaPredicted RBP31.03■■■□□ 2.56
TRIM13-203ENST00000378183 ERVK-7P63135 1459 aa31.02■■■□□ 2.56
TRIM13-203ENST00000378183 EFCAB6Q5THR3 1501 aa31■■■□□ 2.55
TRIM13-203ENST00000378183 IQGAP3Q86VI3 1631 aa31■■■□□ 2.55
TRIM13-203ENST00000378183 CEP170BQ9Y4F5 1589 aaPredicted RBP30.99■■■□□ 2.55
TRIM13-203ENST00000378183 TET3O43151 1660 aa30.99■■■□□ 2.55
TRIM13-203ENST00000378183 A2ML1A8K2U0 1454 aa30.95■■■□□ 2.54
TRIM13-203ENST00000378183 NUP155O75694 1391 aa30.94■■■□□ 2.54
TRIM13-203ENST00000378183 STRCQ7RTU9 1775 aa30.92■■■□□ 2.54
TRIM13-203ENST00000378183 NLRP1Q9C000 1473 aa30.91■■■□□ 2.54
TRIM13-203ENST00000378183 E9PCH4 1651 aa30.9■■■□□ 2.54
TRIM13-203ENST00000378183 RPRD2Q5VT52 1461 aaKnown RBP30.88■■■□□ 2.53
TRIM13-203ENST00000378183 NOS1P29475 1434 aa30.87■■■□□ 2.53
TRIM13-203ENST00000378183 SYNMO15061 1565 aa30.87■■■□□ 2.53
TRIM13-203ENST00000378183 UGGT1Q9NYU2 1555 aa30.82■■■□□ 2.52
TRIM13-203ENST00000378183 UBR1Q8IWV7 1749 aa30.8■■■□□ 2.52
TRIM13-203ENST00000378183 PLA2R1Q13018 1463 aa30.79■■■□□ 2.52
TRIM13-203ENST00000378183 PIK3C2BO00750 1634 aa30.79■■■□□ 2.52
TRIM13-203ENST00000378183 TRIM52Q96A61 297 aa30.77■■■□□ 2.52
TRIM13-203ENST00000378183 SETD5Q9C0A6 1442 aa30.77■■■□□ 2.52
TRIM13-203ENST00000378183 IDI1Q13907 227 aa30.75■■■□□ 2.51
TRIM13-203ENST00000378183 NCKAP5LQ9HCH0 1330 aa30.74■■■□□ 2.51
TRIM13-203ENST00000378183 THEMISQ8N1K5 641 aaPredicted RBP30.74■■■□□ 2.51
TRIM13-203ENST00000378183 KDM5AP29375 1690 aaKnown RBP30.7■■■□□ 2.5
TRIM13-203ENST00000378183 POLR1AO95602 1720 aaPredicted RBP30.7■■■□□ 2.5
TRIM13-203ENST00000378183 SPHKAPQ2M3C7 1700 aa30.7■■■□□ 2.5
TRIM13-203ENST00000378183 SLC52A1Q9NWF4 448 aa30.69■■■□□ 2.5
TRIM13-203ENST00000378183 RAB3GAP2Q9H2M9 1393 aa30.68■■■□□ 2.5
TRIM13-203ENST00000378183 PKD2Q13563 968 aa30.68■■■□□ 2.5
TRIM13-203ENST00000378183 PTPRTO14522 1441 aa30.67■■■□□ 2.5
TRIM13-203ENST00000378183 DMRT2Q9Y5R5 561 aa30.66■■■□□ 2.5
TRIM13-203ENST00000378183 NEURL4Q96JN8 1562 aa30.66■■■□□ 2.5
TRIM13-203ENST00000378183 ADGRB3O60242 1522 aa30.65■■■□□ 2.5
TRIM13-203ENST00000378183 SLC4A1APQ9BWU0 796 aaKnown RBP30.65■■■□□ 2.5
TRIM13-203ENST00000378183 MYO5BQ9ULV0 1848 aa30.65■■■□□ 2.5
TRIM13-203ENST00000378183 ARHGAP23Q9P227 1491 aa30.63■■■□□ 2.49
TRIM13-203ENST00000378183 SLIT1O75093 1534 aa30.63■■■□□ 2.49
TRIM13-203ENST00000378183 TMEM131LA2VDJ0 1609 aa30.62■■■□□ 2.49
TRIM13-203ENST00000378183 ANKLE2Q86XL3 938 aa30.61■■■□□ 2.49
TRIM13-203ENST00000378183 STAG3Q9UJ98 1225 aa30.6■■■□□ 2.49
TRIM13-203ENST00000378183 MPHOSPH9Q99550 1183 aa30.59■■■□□ 2.49
TRIM13-203ENST00000378183 TRPM2O94759 1503 aa30.57■■■□□ 2.49
TRIM13-203ENST00000378183 TMEM2Q9UHN6 1383 aa30.57■■■□□ 2.48
TRIM13-203ENST00000378183 ACIN1Q9UKV3 1341 aaKnown RBP30.57■■■□□ 2.48
TRIM13-203ENST00000378183 MED14O60244 1454 aa30.57■■■□□ 2.48
TRIM13-203ENST00000378183 CLTCL1P53675 1640 aa30.55■■■□□ 2.48
TRIM13-203ENST00000378183 LTKP29376 864 aa30.55■■■□□ 2.48
TRIM13-203ENST00000378183 FOXD1Q16676 465 aa30.54■■■□□ 2.48
TRIM13-203ENST00000378183 SCAF11Q99590 1463 aaKnown RBP30.52■■■□□ 2.48
TRIM13-203ENST00000378183 HRCP23327 699 aa30.52■■■□□ 2.48
TRIM13-203ENST00000378183 NPHP4O75161 1426 aaPredicted RBP30.52■■■□□ 2.48
TRIM13-203ENST00000378183 TXNDC2Q86VQ3 553 aa30.51■■■□□ 2.47
TRIM13-203ENST00000378183 IQGAP1P46940 1657 aa30.51■■■□□ 2.47
TRIM13-203ENST00000378183 CHGAP10645 457 aaKnown RBP30.5■■■□□ 2.47
TRIM13-203ENST00000378183 ZFYVE9O95405 1425 aa30.47■■■□□ 2.47
TRIM13-203ENST00000378183 EID1Q9Y6B2 187 aa30.46■■■□□ 2.47
TRIM13-203ENST00000378183 KIF1BO60333 1816 aa30.45■■■□□ 2.47
TRIM13-203ENST00000378183 RIMS2Q9UQ26 1411 aa30.44■■■□□ 2.46
TRIM13-203ENST00000378183 LTBP4Q8N2S1 1624 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms