RNA–Protein interactions for RNA: ENST00000376935.4

SMIM13-201, Transcript of small integral membrane protein 13, humanhuman

TSL 5

Gene SMIM13, Length 1,251 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM13-201ENST00000376935 PLA2G2EQ9NZK7 142 aa10.42□□□□□ -0.74
SMIM13-201ENST00000376935 CCDC9Q9Y3X0 531 aaKnown RBP10.42□□□□□ -0.74
SMIM13-201ENST00000376935 RIMBP2O15034 1052 aa10.39□□□□□ -0.75
SMIM13-201ENST00000376935 ZSWIM6Q9HCJ5 1215 aa10.39□□□□□ -0.75
SMIM13-201ENST00000376935 CABP2Q9NPB3 220 aa10.39□□□□□ -0.75
SMIM13-201ENST00000376935 ONECUT3O60422 494 aaPredicted RBP10.38□□□□□ -0.75
SMIM13-201ENST00000376935 DDRGK1Q96HY6 314 aa10.37□□□□□ -0.75
SMIM13-201ENST00000376935 G3V3G9 751 aa10.36□□□□□ -0.75
SMIM13-201ENST00000376935 GPR37O15354 613 aa10.36□□□□□ -0.75
SMIM13-201ENST00000376935 A6NJR5 290 aa10.35□□□□□ -0.75
SMIM13-201ENST00000376935 MS4A4AQ96JQ5 239 aa10.35□□□□□ -0.75
SMIM13-201ENST00000376935 LSM11P83369 360 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMIM13-201ENST00000376935 CCDC82Q8N4S0 544 aa10.34□□□□□ -0.75
SMIM13-201ENST00000376935 TRAK2O60296 914 aa10.33□□□□□ -0.76
SMIM13-201ENST00000376935 POTEEQ6S8J3 1075 aa10.31□□□□□ -0.76
SMIM13-201ENST00000376935 MINK1Q8N4C8 1332 aaPredicted RBP10.31□□□□□ -0.76
SMIM13-201ENST00000376935 ARSIQ5FYB1 569 aa10.3□□□□□ -0.76
SMIM13-201ENST00000376935 KHSRPQ92945 711 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMIM13-201ENST00000376935 CLUAP1Q96AJ1 413 aa10.3□□□□□ -0.76
SMIM13-201ENST00000376935 AMHR2Q16671 573 aa10.29□□□□□ -0.76
SMIM13-201ENST00000376935 PARP9Q8IXQ6 854 aa10.29□□□□□ -0.76
SMIM13-201ENST00000376935 GOPCQ9HD26 462 aa10.29□□□□□ -0.76
SMIM13-201ENST00000376935 CCDC102AQ96A19 550 aa10.27□□□□□ -0.77
SMIM13-201ENST00000376935 SPDYE16A6NNV3 312 aaPredicted RBP10.26□□□□□ -0.77
SMIM13-201ENST00000376935 MICALL2Q8IY33 904 aa10.26□□□□□ -0.77
SMIM13-201ENST00000376935 DPYSL4O14531 572 aa10.25□□□□□ -0.77
SMIM13-201ENST00000376935 IRF6O14896 467 aa10.25□□□□□ -0.77
SMIM13-201ENST00000376935 MAP2K5Q13163 448 aa10.25□□□□□ -0.77
SMIM13-201ENST00000376935 PDIA6Q15084 440 aa10.25□□□□□ -0.77
SMIM13-201ENST00000376935 PPP1R15BQ5SWA1 713 aa10.25□□□□□ -0.77
SMIM13-201ENST00000376935 TRAIPQ9BWF2 469 aa10.24□□□□□ -0.77
SMIM13-201ENST00000376935 EMILIN3Q9NT22 766 aa10.24□□□□□ -0.77
SMIM13-201ENST00000376935 HCSTQ9UBK5 93 aa10.24□□□□□ -0.77
SMIM13-201ENST00000376935 GPHNQ9NQX3 736 aaPredicted RBP10.21□□□□□ -0.77
SMIM13-201ENST00000376935 KCTD17Q8N5Z5 321 aa10.2□□□□□ -0.78
SMIM13-201ENST00000376935 MCM6Q14566 821 aa10.19□□□□□ -0.78
SMIM13-201ENST00000376935 AXIN2Q9Y2T1 843 aa10.19□□□□□ -0.78
SMIM13-201ENST00000376935 PCMTD1Q96MG8 357 aaPredicted RBP10.18□□□□□ -0.78
SMIM13-201ENST00000376935 ZNF777Q9ULD5 760 aaPredicted RBP10.17□□□□□ -0.78
SMIM13-201ENST00000376935 NUTM2FA1L443 756 aa10.15□□□□□ -0.78
SMIM13-201ENST00000376935 GNPATO15228 680 aa10.15□□□□□ -0.78
SMIM13-201ENST00000376935 PBX2P40425 430 aa10.14□□□□□ -0.79
SMIM13-201ENST00000376935 PROSER2Q86WR7 435 aaPredicted RBP10.14□□□□□ -0.79
SMIM13-201ENST00000376935 FNBP4Q8N3X1 1017 aaPredicted RBP10.14□□□□□ -0.79
SMIM13-201ENST00000376935 MS4A1P11836 297 aa10.13□□□□□ -0.79
SMIM13-201ENST00000376935 FECHP22830 423 aa10.13□□□□□ -0.79
SMIM13-201ENST00000376935 SERPINA10Q9UK55 444 aa10.13□□□□□ -0.79
SMIM13-201ENST00000376935 RAD21O60216 631 aa10.12□□□□□ -0.79
SMIM13-201ENST00000376935 DSG2Q14126 1118 aa10.12□□□□□ -0.79
SMIM13-201ENST00000376935 TTLL12Q14166 644 aaPredicted RBP10.12□□□□□ -0.79
SMIM13-201ENST00000376935 RGS22Q8NE09 1264 aa10.11□□□□□ -0.79
SMIM13-201ENST00000376935 GRXCR2A6NFK2 248 aa10.1□□□□□ -0.79
SMIM13-201ENST00000376935 HIC1Q14526 733 aa10.1□□□□□ -0.79
SMIM13-201ENST00000376935 SH3D19Q5HYK7 790 aa10.1□□□□□ -0.79
SMIM13-201ENST00000376935 GIGYF2Q6Y7W6 1299 aaKnown RBP10.1□□□□□ -0.79
SMIM13-201ENST00000376935 CCDC97Q96F63 343 aaPredicted RBP10.1□□□□□ -0.79
SMIM13-201ENST00000376935 ADGRD1Q6QNK2 874 aa10.09□□□□□ -0.79
SMIM13-201ENST00000376935 AEBP1Q8IUX7 1158 aa10.09□□□□□ -0.79
SMIM13-201ENST00000376935 POM121Q96HA1 1249 aa10.09□□□□□ -0.79
SMIM13-201ENST00000376935 OSBPP22059 807 aa10.08□□□□□ -0.8
SMIM13-201ENST00000376935 OXER1Q8TDS5 423 aa10.08□□□□□ -0.8
SMIM13-201ENST00000376935 FCHSD2O94868 740 aa10.07□□□□□ -0.8
SMIM13-201ENST00000376935 NUDT7P0C024 238 aa10.07□□□□□ -0.8
SMIM13-201ENST00000376935 REPIN1Q9BWE0 567 aaKnown RBP10.07□□□□□ -0.8
SMIM13-201ENST00000376935 LHX6Q9UPM6 363 aa10.07□□□□□ -0.8
SMIM13-201ENST00000376935 HRO43593 1189 aa10.05□□□□□ -0.8
SMIM13-201ENST00000376935 IRX2Q9BZI1 471 aaPredicted RBP10.05□□□□□ -0.8
SMIM13-201ENST00000376935 FOXK1P85037 733 aa10.04□□□□□ -0.8
SMIM13-201ENST00000376935 RETREG2Q8NC44 543 aa10.03□□□□□ -0.8
SMIM13-201ENST00000376935 MTMR7Q9Y216 660 aa10.03□□□□□ -0.8
SMIM13-201ENST00000376935 SKIV2LQ15477 1246 aaKnown RBP10.02□□□□□ -0.81
SMIM13-201ENST00000376935 TMCO4Q5TGY1 634 aa10.02□□□□□ -0.81
SMIM13-201ENST00000376935 TMUB1Q9BVT8 246 aa10.02□□□□□ -0.81
SMIM13-201ENST00000376935 RGS20O76081 388 aa10.01□□□□□ -0.81
SMIM13-201ENST00000376935 IRF5Q13568 498 aa10.01□□□□□ -0.81
SMIM13-201ENST00000376935 LOC105371045A0A1W2PR82 267 aa10□□□□□ -0.81
SMIM13-201ENST00000376935 GZF1Q9H116 711 aaPredicted RBP10□□□□□ -0.81
SMIM13-201ENST00000376935 MFAP1P55081 439 aaKnown RBP9.99□□□□□ -0.81
SMIM13-201ENST00000376935 COG6Q9Y2V7 657 aa9.99□□□□□ -0.81
SMIM13-201ENST00000376935 KIF3CO14782 793 aa9.98□□□□□ -0.81
SMIM13-201ENST00000376935 PTGDRQ13258 359 aa9.98□□□□□ -0.81
SMIM13-201ENST00000376935 DMRTA1Q5VZB9 504 aa9.98□□□□□ -0.81
SMIM13-201ENST00000376935 PROCA1Q8NCQ7 364 aaPredicted RBP9.98□□□□□ -0.81
SMIM13-201ENST00000376935 ARHGAP33O14559 1287 aa9.97□□□□□ -0.81
SMIM13-201ENST00000376935 PRIM1P49642 420 aaKnown RBP9.97□□□□□ -0.81
SMIM13-201ENST00000376935 MAP3K9P80192 1104 aa9.97□□□□□ -0.81
SMIM13-201ENST00000376935 PLPP6Q8IY26 295 aa9.97□□□□□ -0.81
SMIM13-201ENST00000376935 KCTD12Q96CX2 325 aaKnown RBP9.97□□□□□ -0.81
SMIM13-201ENST00000376935 TMC2Q8TDI7 906 aa9.96□□□□□ -0.82
SMIM13-201ENST00000376935 SPDYE5A6NIY4 337 aa9.95□□□□□ -0.82
SMIM13-201ENST00000376935 TK2O00142 265 aa9.95□□□□□ -0.82
SMIM13-201ENST00000376935 IFFO2Q5TF58 517 aa9.95□□□□□ -0.82
SMIM13-201ENST00000376935 PCDHGA4Q9Y5G9 962 aa9.95□□□□□ -0.82
SMIM13-201ENST00000376935 CLCN1P35523 988 aa9.94□□□□□ -0.82
SMIM13-201ENST00000376935 FOXD4L5Q5VV16 416 aaPredicted RBP9.94□□□□□ -0.82
SMIM13-201ENST00000376935 FOXD4L4Q8WXT5 416 aaPredicted RBP9.94□□□□□ -0.82
SMIM13-201ENST00000376935 ZNF330Q9Y3S2 320 aaPredicted RBP9.93□□□□□ -0.82
SMIM13-201ENST00000376935 SSTR3P32745 418 aaPredicted RBP9.92□□□□□ -0.82
SMIM13-201ENST00000376935 PSEN2P49810 448 aa9.92□□□□□ -0.82
SMIM13-201ENST00000376935 DDX12PQ92771 950 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms