RNA–Protein interactions for RNA: ENST00000376745.8

PPP1CA-203, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CA, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-203ENST00000376745 CNTLNQ9NXG0 1405 aa50.45■■■■■ 5.67
PPP1CA-203ENST00000376745 ESF1Q9H501 851 aaKnown RBP50.44■■■■■ 5.66
PPP1CA-203ENST00000376745 RNF17Q9BXT8 1623 aaKnown RBP50.43■■■■■ 5.66
PPP1CA-203ENST00000376745 ANKRD50Q9ULJ7 1429 aa50.37■■■■■ 5.65
PPP1CA-203ENST00000376745 MROH1Q8NDA8 1641 aa50.34■■■■■ 5.65
PPP1CA-203ENST00000376745 FAM135AQ9P2D6 1515 aa50.34■■■■■ 5.65
PPP1CA-203ENST00000376745 MROH2AA6NES4 1674 aa50.3■■■■■ 5.64
PPP1CA-203ENST00000376745 CLTCQ00610 1675 aaKnown RBP50.3■■■■■ 5.64
PPP1CA-203ENST00000376745 CEBPAP49715 358 aaPredicted RBP50.3■■■■■ 5.64
PPP1CA-203ENST00000376745 ZMYM3Q14202 1370 aa50.28■■■■■ 5.64
PPP1CA-203ENST00000376745 KDM5DQ9BY66 1539 aa50.27■■■■■ 5.64
PPP1CA-203ENST00000376745 DEPDC5O75140 1603 aa50.26■■■■■ 5.64
PPP1CA-203ENST00000376745 WASHC2CQ9Y4E1 1318 aa50.26■■■■■ 5.64
PPP1CA-203ENST00000376745 C3P01024 1663 aa50.25■■■■■ 5.63
PPP1CA-203ENST00000376745 PRDM15P57071 1507 aaPredicted RBP50.24■■■■■ 5.63
PPP1CA-203ENST00000376745 PLPPR3Q6T4P5 718 aa50.23■■■■■ 5.63
PPP1CA-203ENST00000376745 ABCC3O15438 1527 aa50.18■■■■■ 5.62
PPP1CA-203ENST00000376745 NAIPQ13075 1403 aa50.14■■■■■ 5.62
PPP1CA-203ENST00000376745 ZC3H13Q5T200 1668 aaKnown RBP50.14■■■■■ 5.62
PPP1CA-203ENST00000376745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP50.13■■■■■ 5.62
PPP1CA-203ENST00000376745 HFM1A2PYH4 1435 aa50.11■■■■■ 5.61
PPP1CA-203ENST00000376745 VWDEQ8N2E2 1590 aa50.1■■■■■ 5.61
PPP1CA-203ENST00000376745 KANK1Q14678 1352 aa50.07■■■■■ 5.61
PPP1CA-203ENST00000376745 NPATQ14207 1427 aa50.06■■■■■ 5.6
PPP1CA-203ENST00000376745 GCC2Q8IWJ2 1684 aa50.05■■■■■ 5.6
PPP1CA-203ENST00000376745 CEP152O94986 1710 aa50.04■■■■■ 5.6
PPP1CA-203ENST00000376745 PZPP20742 1482 aa50.03■■■■■ 5.6
PPP1CA-203ENST00000376745 UNC13BO14795 1591 aa50.03■■■■■ 5.6
PPP1CA-203ENST00000376745 SETD1BQ9UPS6 1966 aaKnown RBP50.01■■■■■ 5.6
PPP1CA-203ENST00000376745 LMTK2Q8IWU2 1503 aa50■■■■■ 5.6
PPP1CA-203ENST00000376745 CAMSAP1Q5T5Y3 1602 aa49.97■■■■■ 5.59
PPP1CA-203ENST00000376745 ARHGAP31Q2M1Z3 1444 aa49.94■■■■■ 5.59
PPP1CA-203ENST00000376745 FBXO31Q5XUX0 539 aaPredicted RBP49.93■■■■■ 5.58
PPP1CA-203ENST00000376745 LMTK3Q96Q04 1460 aa49.92■■■■■ 5.58
PPP1CA-203ENST00000376745 PREX1Q8TCU6 1659 aa49.89■■■■■ 5.58
PPP1CA-203ENST00000376745 NUP155O75694 1391 aa49.86■■■■■ 5.57
PPP1CA-203ENST00000376745 UHRF1BP1Q6BDS2 1440 aa49.83■■■■■ 5.57
PPP1CA-203ENST00000376745 IQGAP3Q86VI3 1631 aa49.82■■■■■ 5.57
PPP1CA-203ENST00000376745 EFCAB6Q5THR3 1501 aa49.81■■■■■ 5.56
PPP1CA-203ENST00000376745 SPATA31D1Q6ZQQ2 1576 aa49.79■■■■■ 5.56
PPP1CA-203ENST00000376745 TNRQ92752 1358 aa49.78■■■■■ 5.56
PPP1CA-203ENST00000376745 ERVK-7P63135 1459 aa49.78■■■■■ 5.56
PPP1CA-203ENST00000376745 TET3O43151 1660 aa49.77■■■■■ 5.56
PPP1CA-203ENST00000376745 MYO3AQ8NEV4 1616 aa49.72■■■■■ 5.55
PPP1CA-203ENST00000376745 SETD5Q9C0A6 1442 aa49.72■■■■■ 5.55
PPP1CA-203ENST00000376745 RPRD2Q5VT52 1461 aaKnown RBP49.7■■■■■ 5.55
PPP1CA-203ENST00000376745 CFAP65Q6ZU64 1925 aaKnown RBP49.69■■■■■ 5.55
PPP1CA-203ENST00000376745 HSPA2P54652 639 aa49.65■■■■■ 5.54
PPP1CA-203ENST00000376745 ZNF142P52746 1687 aaPredicted RBP49.62■■■■■ 5.53
PPP1CA-203ENST00000376745 NOS1P29475 1434 aa49.61■■■■■ 5.53
PPP1CA-203ENST00000376745 NLRP1Q9C000 1473 aa49.61■■■■■ 5.53
PPP1CA-203ENST00000376745 CEP170BQ9Y4F5 1589 aaPredicted RBP49.61■■■■■ 5.53
PPP1CA-203ENST00000376745 TRIM52Q96A61 297 aa49.61■■■■■ 5.53
PPP1CA-203ENST00000376745 A2ML1A8K2U0 1454 aa49.6■■■■■ 5.53
PPP1CA-203ENST00000376745 E9PCH4 1651 aa49.59■■■■■ 5.53
PPP1CA-203ENST00000376745 RAB3GAP2Q9H2M9 1393 aa49.55■■■■■ 5.52
PPP1CA-203ENST00000376745 ACIN1Q9UKV3 1341 aaKnown RBP49.52■■■■■ 5.52
PPP1CA-203ENST00000376745 SYNMO15061 1565 aa49.51■■■■■ 5.52
PPP1CA-203ENST00000376745 SLC4A1APQ9BWU0 796 aaKnown RBP49.44■■■■■ 5.5
PPP1CA-203ENST00000376745 HRCP23327 699 aa49.43■■■■■ 5.5
PPP1CA-203ENST00000376745 UGGT1Q9NYU2 1555 aa49.41■■■■■ 5.5
PPP1CA-203ENST00000376745 SLC52A1Q9NWF4 448 aa49.41■■■■■ 5.5
PPP1CA-203ENST00000376745 IDI1Q13907 227 aa49.4■■■■■ 5.5
PPP1CA-203ENST00000376745 TRIM26Q12899 539 aaPredicted RBP49.39■■■■■ 5.5
PPP1CA-203ENST00000376745 PKD2Q13563 968 aa49.38■■■■■ 5.5
PPP1CA-203ENST00000376745 PTPRTO14522 1441 aa49.36■■■■■ 5.49
PPP1CA-203ENST00000376745 PLA2R1Q13018 1463 aa49.35■■■■■ 5.49
PPP1CA-203ENST00000376745 THEMISQ8N1K5 641 aaPredicted RBP49.34■■■■■ 5.49
PPP1CA-203ENST00000376745 MPHOSPH9Q99550 1183 aa49.33■■■■■ 5.49
PPP1CA-203ENST00000376745 PIK3C2BO00750 1634 aa49.32■■■■■ 5.49
PPP1CA-203ENST00000376745 STRCQ7RTU9 1775 aa49.31■■■■■ 5.48
PPP1CA-203ENST00000376745 UBR1Q8IWV7 1749 aa49.3■■■■■ 5.48
PPP1CA-203ENST00000376745 SPHKAPQ2M3C7 1700 aa49.27■■■■■ 5.48
PPP1CA-203ENST00000376745 KDM5AP29375 1690 aaKnown RBP49.24■■■■■ 5.47
PPP1CA-203ENST00000376745 TRPM2O94759 1503 aa49.19■■■■■ 5.46
PPP1CA-203ENST00000376745 ADGRB3O60242 1522 aa49.18■■■■■ 5.46
PPP1CA-203ENST00000376745 STAG3Q9UJ98 1225 aa49.18■■■■■ 5.46
PPP1CA-203ENST00000376745 FOXD1Q16676 465 aa49.17■■■■■ 5.46
PPP1CA-203ENST00000376745 NCKAP5LQ9HCH0 1330 aa49.17■■■■■ 5.46
PPP1CA-203ENST00000376745 ARHGAP23Q9P227 1491 aa49.14■■■■■ 5.46
PPP1CA-203ENST00000376745 SLIT1O75093 1534 aa49.12■■■■■ 5.45
PPP1CA-203ENST00000376745 ANKLE2Q86XL3 938 aa49.12■■■■■ 5.45
PPP1CA-203ENST00000376745 DMRT2Q9Y5R5 561 aa49.12■■■■■ 5.45
PPP1CA-203ENST00000376745 TMEM131LA2VDJ0 1609 aa49.11■■■■■ 5.45
PPP1CA-203ENST00000376745 TMEM2Q9UHN6 1383 aa49.09■■■■■ 5.45
PPP1CA-203ENST00000376745 CLTCL1P53675 1640 aa49.05■■■■■ 5.44
PPP1CA-203ENST00000376745 POLR1AO95602 1720 aaPredicted RBP49.03■■■■■ 5.44
PPP1CA-203ENST00000376745 NEURL4Q96JN8 1562 aa49.03■■■■■ 5.44
PPP1CA-203ENST00000376745 MYO5BQ9ULV0 1848 aa49■■■■■ 5.43
PPP1CA-203ENST00000376745 CHGAP10645 457 aaKnown RBP48.99■■■■■ 5.43
PPP1CA-203ENST00000376745 LTKP29376 864 aa48.99■■■■■ 5.43
PPP1CA-203ENST00000376745 MED14O60244 1454 aa48.99■■■■■ 5.43
PPP1CA-203ENST00000376745 SCAF11Q99590 1463 aaKnown RBP48.96■■■■■ 5.43
PPP1CA-203ENST00000376745 TXNDC2Q86VQ3 553 aa48.96■■■■■ 5.43
PPP1CA-203ENST00000376745 EID1Q9Y6B2 187 aa48.93■■■■■ 5.42
PPP1CA-203ENST00000376745 ZFYVE9O95405 1425 aa48.93■■■■■ 5.42
PPP1CA-203ENST00000376745 CCDC144AA2RUR9 1427 aa48.9■■■■■ 5.42
PPP1CA-203ENST00000376745 NPHP4O75161 1426 aaPredicted RBP48.9■■■■■ 5.42
PPP1CA-203ENST00000376745 RIMS2Q9UQ26 1411 aa48.86■■■■■ 5.41
PPP1CA-203ENST00000376745 ANKRD30BQ9BXX2 1392 aa48.85■■■■■ 5.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms