RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 UNC13BO14795 1591 aa33.87■■■■□ 3.01
HLA-C-202ENST00000376237 DEPDC5O75140 1603 aa33.84■■■■□ 3.01
HLA-C-202ENST00000376237 KDM5DQ9BY66 1539 aa33.83■■■■□ 3.01
HLA-C-202ENST00000376237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.83■■■■□ 3.01
HLA-C-202ENST00000376237 KANK1Q14678 1352 aa33.82■■■■□ 3.01
HLA-C-202ENST00000376237 RNF17Q9BXT8 1623 aaKnown RBP33.82■■■■□ 3
HLA-C-202ENST00000376237 GGT6Q6P531 493 aa33.8■■■■□ 3
HLA-C-202ENST00000376237 PRDM15P57071 1507 aaPredicted RBP33.79■■■■□ 3
HLA-C-202ENST00000376237 DHX57Q6P158 1386 aaKnown RBP33.79■■■■□ 3
HLA-C-202ENST00000376237 MPHOSPH9Q99550 1183 aa33.78■■■■□ 3
HLA-C-202ENST00000376237 SLC4A1APQ9BWU0 796 aaKnown RBP33.77■■■■□ 3
HLA-C-202ENST00000376237 PPP6R1Q9UPN7 881 aa33.77■■■■□ 3
HLA-C-202ENST00000376237 ARID4BQ4LE39 1312 aaPredicted RBP33.76■■■□□ 2.99
HLA-C-202ENST00000376237 MROH1Q8NDA8 1641 aa33.75■■■□□ 2.99
HLA-C-202ENST00000376237 PZPP20742 1482 aa33.75■■■□□ 2.99
HLA-C-202ENST00000376237 IQGAP3Q86VI3 1631 aa33.73■■■□□ 2.99
HLA-C-202ENST00000376237 FAM135AQ9P2D6 1515 aa33.73■■■□□ 2.99
HLA-C-202ENST00000376237 CCER1Q8TC90 406 aaPredicted RBP33.73■■■□□ 2.99
HLA-C-202ENST00000376237 VWDEQ8N2E2 1590 aa33.72■■■□□ 2.99
HLA-C-202ENST00000376237 SIGLEC1Q9BZZ2 1709 aa33.72■■■□□ 2.99
HLA-C-202ENST00000376237 WASHC2CQ9Y4E1 1318 aa33.68■■■□□ 2.98
HLA-C-202ENST00000376237 LMTK2Q8IWU2 1503 aa33.66■■■□□ 2.98
HLA-C-202ENST00000376237 CLSPNQ9HAW4 1339 aa33.65■■■□□ 2.98
HLA-C-202ENST00000376237 PKD2Q13563 968 aa33.63■■■□□ 2.97
HLA-C-202ENST00000376237 MLECQ14165 292 aa33.63■■■□□ 2.97
HLA-C-202ENST00000376237 ABCC3O15438 1527 aa33.6■■■□□ 2.97
HLA-C-202ENST00000376237 ZC3H13Q5T200 1668 aaKnown RBP33.6■■■□□ 2.97
HLA-C-202ENST00000376237 ESF1Q9H501 851 aaKnown RBP33.58■■■□□ 2.97
HLA-C-202ENST00000376237 TET3O43151 1660 aa33.58■■■□□ 2.97
HLA-C-202ENST00000376237 EFCAB6Q5THR3 1501 aa33.52■■■□□ 2.96
HLA-C-202ENST00000376237 CNTLNQ9NXG0 1405 aa33.52■■■□□ 2.96
HLA-C-202ENST00000376237 CEP152O94986 1710 aa33.52■■■□□ 2.96
HLA-C-202ENST00000376237 ARHGAP31Q2M1Z3 1444 aa33.51■■■□□ 2.96
HLA-C-202ENST00000376237 FOXD1Q16676 465 aa33.51■■■□□ 2.95
HLA-C-202ENST00000376237 RPRD2Q5VT52 1461 aaKnown RBP33.5■■■□□ 2.95
HLA-C-202ENST00000376237 ANKRD30BQ9BXX2 1392 aa33.48■■■□□ 2.95
HLA-C-202ENST00000376237 CAMSAP1Q5T5Y3 1602 aa33.47■■■□□ 2.95
HLA-C-202ENST00000376237 E9PCH4 1651 aa33.45■■■□□ 2.95
HLA-C-202ENST00000376237 NPATQ14207 1427 aa33.45■■■□□ 2.94
HLA-C-202ENST00000376237 CLTCQ00610 1675 aaKnown RBP33.43■■■□□ 2.94
HLA-C-202ENST00000376237 ZMYM3Q14202 1370 aa33.41■■■□□ 2.94
HLA-C-202ENST00000376237 PTPRTO14522 1441 aa33.39■■■□□ 2.94
HLA-C-202ENST00000376237 MROH2AA6NES4 1674 aa33.37■■■□□ 2.93
HLA-C-202ENST00000376237 PLA2R1Q13018 1463 aa33.35■■■□□ 2.93
HLA-C-202ENST00000376237 FER1L4A9Z1Z3 1794 aa33.35■■■□□ 2.93
HLA-C-202ENST00000376237 ADAMTSL3P82987 1691 aa33.35■■■□□ 2.93
HLA-C-202ENST00000376237 NOS1P29475 1434 aa33.33■■■□□ 2.93
HLA-C-202ENST00000376237 SIN3AQ96ST3 1273 aa33.32■■■□□ 2.92
HLA-C-202ENST00000376237 TRPM2O94759 1503 aa33.31■■■□□ 2.92
HLA-C-202ENST00000376237 CCDC144AA2RUR9 1427 aa33.31■■■□□ 2.92
HLA-C-202ENST00000376237 SPHKAPQ2M3C7 1700 aa33.3■■■□□ 2.92
HLA-C-202ENST00000376237 MADDQ8WXG6 1647 aa33.28■■■□□ 2.92
HLA-C-202ENST00000376237 NEUROD1Q13562 356 aa33.28■■■□□ 2.92
HLA-C-202ENST00000376237 ERVK-7P63135 1459 aa33.27■■■□□ 2.92
HLA-C-202ENST00000376237 FBXO31Q5XUX0 539 aaPredicted RBP33.26■■■□□ 2.91
HLA-C-202ENST00000376237 ZEB1P37275 1124 aaPredicted RBP33.25■■■□□ 2.91
HLA-C-202ENST00000376237 SLC52A1Q9NWF4 448 aa33.23■■■□□ 2.91
HLA-C-202ENST00000376237 TIMELESSQ9UNS1 1208 aa33.23■■■□□ 2.91
HLA-C-202ENST00000376237 PREX1Q8TCU6 1659 aa33.23■■■□□ 2.91
HLA-C-202ENST00000376237 SPATA31D1Q6ZQQ2 1576 aa33.23■■■□□ 2.91
HLA-C-202ENST00000376237 RIMS1Q86UR5 1692 aaKnown RBP33.2■■■□□ 2.91
HLA-C-202ENST00000376237 CEBPAP49715 358 aaPredicted RBP33.18■■■□□ 2.9
HLA-C-202ENST00000376237 C3P01024 1663 aa33.18■■■□□ 2.9
HLA-C-202ENST00000376237 CFAP65Q6ZU64 1925 aaKnown RBP33.18■■■□□ 2.9
HLA-C-202ENST00000376237 SYNMO15061 1565 aa33.17■■■□□ 2.9
HLA-C-202ENST00000376237 TNRQ92752 1358 aa33.14■■■□□ 2.9
HLA-C-202ENST00000376237 CLTCL1P53675 1640 aa33.14■■■□□ 2.9
HLA-C-202ENST00000376237 TONSLQ96HA7 1378 aa33.13■■■□□ 2.89
HLA-C-202ENST00000376237 IDI1Q13907 227 aa33.12■■■□□ 2.89
HLA-C-202ENST00000376237 PIK3C2BO00750 1634 aa33.11■■■□□ 2.89
HLA-C-202ENST00000376237 UGGT1Q9NYU2 1555 aa33.11■■■□□ 2.89
HLA-C-202ENST00000376237 PTPRMP28827 1452 aa33.11■■■□□ 2.89
HLA-C-202ENST00000376237 NEURL4Q96JN8 1562 aa33.08■■■□□ 2.89
HLA-C-202ENST00000376237 PLPPR3Q6T4P5 718 aa33.07■■■□□ 2.88
HLA-C-202ENST00000376237 SPATA31E1Q6ZUB1 1445 aa33.06■■■□□ 2.88
HLA-C-202ENST00000376237 KDM4FA0A1W2PPD8 638 aa33.06■■■□□ 2.88
HLA-C-202ENST00000376237 NLRP1Q9C000 1473 aa33.04■■■□□ 2.88
HLA-C-202ENST00000376237 L3MBTL2Q969R5 705 aa33.02■■■□□ 2.88
HLA-C-202ENST00000376237 CHGAP10645 457 aaKnown RBP33.02■■■□□ 2.88
HLA-C-202ENST00000376237 KIF1BO60333 1816 aa33.01■■■□□ 2.88
HLA-C-202ENST00000376237 RGL3Q3MIN7 710 aa33.01■■■□□ 2.87
HLA-C-202ENST00000376237 ADGRB3O60242 1522 aa32.99■■■□□ 2.87
HLA-C-202ENST00000376237 STAG3Q9UJ98 1225 aa32.99■■■□□ 2.87
HLA-C-202ENST00000376237 STAC3Q96MF2 364 aa32.97■■■□□ 2.87
HLA-C-202ENST00000376237 RPGRIP1LQ68CZ1 1315 aa32.94■■■□□ 2.86
HLA-C-202ENST00000376237 PPP1R15AO75807 674 aaPredicted RBP32.93■■■□□ 2.86
HLA-C-202ENST00000376237 ZNF326Q5BKZ1 582 aaKnown RBP32.93■■■□□ 2.86
HLA-C-202ENST00000376237 TMEM131LA2VDJ0 1609 aa32.93■■■□□ 2.86
HLA-C-202ENST00000376237 DCAF11Q8TEB1 546 aa32.92■■■□□ 2.86
HLA-C-202ENST00000376237 SETD1BQ9UPS6 1966 aaKnown RBP32.92■■■□□ 2.86
HLA-C-202ENST00000376237 KDM5AP29375 1690 aaKnown RBP32.9■■■□□ 2.86
HLA-C-202ENST00000376237 A2ML1A8K2U0 1454 aa32.9■■■□□ 2.86
HLA-C-202ENST00000376237 MYO3AQ8NEV4 1616 aa32.88■■■□□ 2.85
HLA-C-202ENST00000376237 THEMISQ8N1K5 641 aaPredicted RBP32.84■■■□□ 2.85
HLA-C-202ENST00000376237 KDM2AQ9Y2K7 1162 aa32.84■■■□□ 2.85
HLA-C-202ENST00000376237 UHRF1BP1Q6BDS2 1440 aa32.83■■■□□ 2.85
HLA-C-202ENST00000376237 CEP170BQ9Y4F5 1589 aaPredicted RBP32.82■■■□□ 2.84
HLA-C-202ENST00000376237 HDGFP51858 240 aaKnown RBP32.82■■■□□ 2.84
HLA-C-202ENST00000376237 UBR1Q8IWV7 1749 aa32.81■■■□□ 2.84
HLA-C-202ENST00000376237 AEBP2Q6ZN18 517 aaPredicted RBP32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms