RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 INO80Q9ULG1 1556 aaPredicted RBP25.98■■□□□ 1.75
CLIC1-208ENST00000375784 FOXD1Q16676 465 aa25.97■■□□□ 1.75
CLIC1-208ENST00000375784 ZNF644Q9H582 1327 aaPredicted RBP25.92■■□□□ 1.74
CLIC1-208ENST00000375784 A2ML1A8K2U0 1454 aa25.91■■□□□ 1.74
CLIC1-208ENST00000375784 RSPH4AQ5TD94 716 aa25.87■■□□□ 1.73
CLIC1-208ENST00000375784 DNMT1P26358 1616 aaKnown RBP25.85■■□□□ 1.73
CLIC1-208ENST00000375784 ADGBQ8N7X0 1667 aa25.85■■□□□ 1.73
CLIC1-208ENST00000375784 HSPA1LP34931 641 aa25.85■■□□□ 1.73
CLIC1-208ENST00000375784 SCAF1Q9H7N4 1312 aaKnown RBP25.84■■□□□ 1.73
CLIC1-208ENST00000375784 TOM1O60784 492 aa25.83■■□□□ 1.73
CLIC1-208ENST00000375784 PIP4K2BP78356 416 aa25.83■■□□□ 1.73
CLIC1-208ENST00000375784 MBD5Q9P267 1494 aa25.82■■□□□ 1.72
CLIC1-208ENST00000375784 DHX29Q7Z478 1369 aaKnown RBP25.82■■□□□ 1.72
CLIC1-208ENST00000375784 RTEL1-TNFRSF6BF6WH68 1400 aa25.81■■□□□ 1.72
CLIC1-208ENST00000375784 MYOM3Q5VTT5 1437 aa25.8■■□□□ 1.72
CLIC1-208ENST00000375784 CPS1P31327 1500 aa25.8■■□□□ 1.72
CLIC1-208ENST00000375784 FBXO31Q5XUX0 539 aaPredicted RBP25.8■■□□□ 1.72
CLIC1-208ENST00000375784 TNRQ92752 1358 aa25.8■■□□□ 1.72
CLIC1-208ENST00000375784 CAMSAP2Q08AD1 1489 aa25.79■■□□□ 1.72
CLIC1-208ENST00000375784 MIA2Q96PC5 1412 aa25.79■■□□□ 1.72
CLIC1-208ENST00000375784 SHANK2Q9UPX8 1470 aa25.79■■□□□ 1.72
CLIC1-208ENST00000375784 MED1Q15648 1581 aaPredicted RBP25.78■■□□□ 1.72
CLIC1-208ENST00000375784 NEURL4Q96JN8 1562 aa25.77■■□□□ 1.72
CLIC1-208ENST00000375784 TSPY4P0CV99 314 aa25.76■■□□□ 1.71
CLIC1-208ENST00000375784 TSPY10P0CW01 314 aa25.76■■□□□ 1.71
CLIC1-208ENST00000375784 KIF3BO15066 747 aa25.75■■□□□ 1.71
CLIC1-208ENST00000375784 PZPP20742 1482 aa25.74■■□□□ 1.71
CLIC1-208ENST00000375784 ANKLE2Q86XL3 938 aa25.74■■□□□ 1.71
CLIC1-208ENST00000375784 CCDC141Q6ZP82 1450 aa25.73■■□□□ 1.71
CLIC1-208ENST00000375784 POLR1AO95602 1720 aaPredicted RBP25.73■■□□□ 1.71
CLIC1-208ENST00000375784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.72■■□□□ 1.712e-12■■■□□ 15.8
CLIC1-208ENST00000375784 WASHC2CQ9Y4E1 1318 aa25.71■■□□□ 1.71
CLIC1-208ENST00000375784 THEMISQ8N1K5 641 aaPredicted RBP25.71■■□□□ 1.71
CLIC1-208ENST00000375784 KDM5DQ9BY66 1539 aa25.71■■□□□ 1.71
CLIC1-208ENST00000375784 FAM135AQ9P2D6 1515 aa25.69■■□□□ 1.7
CLIC1-208ENST00000375784 VWDEQ8N2E2 1590 aa25.68■■□□□ 1.7
CLIC1-208ENST00000375784 ARHGEF5Q12774 1597 aa25.67■■□□□ 1.7
CLIC1-208ENST00000375784 NLRP1Q9C000 1473 aa25.66■■□□□ 1.7
CLIC1-208ENST00000375784 MED14O60244 1454 aa25.66■■□□□ 1.7
CLIC1-208ENST00000375784 NPHP4O75161 1426 aaPredicted RBP25.65■■□□□ 1.7
CLIC1-208ENST00000375784 UGGT1Q9NYU2 1555 aa25.64■■□□□ 1.69
CLIC1-208ENST00000375784 FGD6Q6ZV73 1430 aa25.63■■□□□ 1.69
CLIC1-208ENST00000375784 ALKQ9UM73 1620 aa25.63■■□□□ 1.69
CLIC1-208ENST00000375784 DEPDC5O75140 1603 aa25.61■■□□□ 1.69
CLIC1-208ENST00000375784 PTPN23Q9H3S7 1636 aa25.58■■□□□ 1.69
CLIC1-208ENST00000375784 FAM50AQ14320 339 aaKnown RBP25.54■■□□□ 1.68
CLIC1-208ENST00000375784 LRRC7Q96NW7 1537 aa25.53■■□□□ 1.68
CLIC1-208ENST00000375784 IQGAP1P46940 1657 aa25.53■■□□□ 1.68
CLIC1-208ENST00000375784 PPARGC1BQ86YN6 1023 aaKnown RBP25.53■■□□□ 1.68
CLIC1-208ENST00000375784 ABCC5O15440 1437 aa25.52■■□□□ 1.68
CLIC1-208ENST00000375784 MAST1Q9Y2H9 1570 aa25.52■■□□□ 1.68
CLIC1-208ENST00000375784 DAPK1P53355 1430 aa25.49■■□□□ 1.67
CLIC1-208ENST00000375784 STRCP1A6NGW2 1772 aa25.48■■□□□ 1.67
CLIC1-208ENST00000375784 ABCC3O15438 1527 aa25.47■■□□□ 1.67
CLIC1-208ENST00000375784 RNF17Q9BXT8 1623 aaKnown RBP25.46■■□□□ 1.67
CLIC1-208ENST00000375784 SYNMO15061 1565 aa25.46■■□□□ 1.67
CLIC1-208ENST00000375784 ERVK-7P63135 1459 aa25.46■■□□□ 1.67
CLIC1-208ENST00000375784 RRP7BPQ9NSQ0 103 aa25.45■■□□□ 1.66
CLIC1-208ENST00000375784 CHIC2Q9UKJ5 165 aa25.45■■□□□ 1.66
CLIC1-208ENST00000375784 ANKRD30AQ9BXX3 1397 aa25.43■■□□□ 1.66
CLIC1-208ENST00000375784 KIF15Q9NS87 1388 aa25.43■■□□□ 1.66
CLIC1-208ENST00000375784 ZC3H13Q5T200 1668 aaKnown RBP25.42■■□□□ 1.66
CLIC1-208ENST00000375784 DUOX2Q9NRD8 1548 aa25.39■■□□□ 1.66
CLIC1-208ENST00000375784 RGS17Q9UGC6 210 aaPredicted RBP25.39■■□□□ 1.66
CLIC1-208ENST00000375784 SCAF11Q99590 1463 aaKnown RBP25.39■■□□□ 1.65
CLIC1-208ENST00000375784 LTKP29376 864 aa25.38■■□□□ 1.65
CLIC1-208ENST00000375784 CROCC2H7BZ55 1655 aa25.38■■□□□ 1.65
CLIC1-208ENST00000375784 EIF2AK4Q9P2K8 1649 aaKnown RBP25.37■■□□□ 1.65
CLIC1-208ENST00000375784 TXNDC2Q86VQ3 553 aa25.36■■□□□ 1.65
CLIC1-208ENST00000375784 UBR1Q8IWV7 1749 aa25.35■■□□□ 1.65
CLIC1-208ENST00000375784 MROH1Q8NDA8 1641 aa25.35■■□□□ 1.65
CLIC1-208ENST00000375784 ARHGAP23Q9P227 1491 aa25.34■■□□□ 1.65
CLIC1-208ENST00000375784 ERBINQ96RT1 1412 aa25.34■■□□□ 1.65
CLIC1-208ENST00000375784 SLIT1O75093 1534 aa25.32■■□□□ 1.64
CLIC1-208ENST00000375784 EID1Q9Y6B2 187 aa25.3■■□□□ 1.64
CLIC1-208ENST00000375784 ADGRL2O95490 1459 aa25.29■■□□□ 1.64
CLIC1-208ENST00000375784 CEP152O94986 1710 aa25.29■■□□□ 1.64
CLIC1-208ENST00000375784 ARHGAP31Q2M1Z3 1444 aa25.29■■□□□ 1.64
CLIC1-208ENST00000375784 FAM135BQ49AJ0 1406 aa25.29■■□□□ 1.64
CLIC1-208ENST00000375784 ITGAEP38570 1179 aa25.28■■□□□ 1.64
CLIC1-208ENST00000375784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.26■■□□□ 1.632e-10■□□□□ 10.7
CLIC1-208ENST00000375784 XIRP1Q702N8 1843 aaKnown RBP25.25■■□□□ 1.63
CLIC1-208ENST00000375784 CFAP65Q6ZU64 1925 aaKnown RBP25.24■■□□□ 1.63
CLIC1-208ENST00000375784 KANK1Q14678 1352 aa25.24■■□□□ 1.63
CLIC1-208ENST00000375784 ROCK1Q13464 1354 aa25.23■■□□□ 1.63
CLIC1-208ENST00000375784 TMEM2Q9UHN6 1383 aa25.23■■□□□ 1.63
CLIC1-208ENST00000375784 RRBP1Q9P2E9 1410 aaKnown RBP25.22■■□□□ 1.63
CLIC1-208ENST00000375784 POTEAQ6S8J7 498 aa25.22■■□□□ 1.63
CLIC1-208ENST00000375784 ANKRD50Q9ULJ7 1429 aa25.21■■□□□ 1.63
CLIC1-208ENST00000375784 TMEM94Q12767 1356 aa25.21■■□□□ 1.63
CLIC1-208ENST00000375784 PRDM15P57071 1507 aaPredicted RBP25.21■■□□□ 1.63
CLIC1-208ENST00000375784 KCNA6P17658 529 aa25.19■■□□□ 1.62
CLIC1-208ENST00000375784 STAG3Q9UJ98 1225 aa25.19■■□□□ 1.62
CLIC1-208ENST00000375784 PIK3C2BO00750 1634 aa25.18■■□□□ 1.62
CLIC1-208ENST00000375784 PROSER2Q86WR7 435 aaPredicted RBP25.15■■□□□ 1.62
CLIC1-208ENST00000375784 IDI1Q13907 227 aa25.14■■□□□ 1.62
CLIC1-208ENST00000375784 SLC26A8Q96RN1 970 aa25.14■■□□□ 1.62
CLIC1-208ENST00000375784 RBM33Q96EV2 1170 aaKnown RBP25.13■■□□□ 1.61
CLIC1-208ENST00000375784 EFCAB6Q5THR3 1501 aa25.12■■□□□ 1.61
CLIC1-208ENST00000375784 ROBO1Q9Y6N7 1651 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms