RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 MROH1Q8NDA8 1641 aa24.53■■□□□ 1.52
C11orf88-202ENST00000375618 RNF17Q9BXT8 1623 aaKnown RBP24.53■■□□□ 1.52
C11orf88-202ENST00000375618 EIF2AK4Q9P2K8 1649 aaKnown RBP24.53■■□□□ 1.52
C11orf88-202ENST00000375618 MROH2AA6NES4 1674 aa24.52■■□□□ 1.52
C11orf88-202ENST00000375618 ZMYM3Q14202 1370 aa24.51■■□□□ 1.51
C11orf88-202ENST00000375618 ERBINQ96RT1 1412 aa24.51■■□□□ 1.51
C11orf88-202ENST00000375618 ESF1Q9H501 851 aaKnown RBP24.5■■□□□ 1.51
C11orf88-202ENST00000375618 LMTK3Q96Q04 1460 aa24.49■■□□□ 1.51
C11orf88-202ENST00000375618 ITGAEP38570 1179 aa24.48■■□□□ 1.51
C11orf88-202ENST00000375618 PPP6R1Q9UPN7 881 aa24.48■■□□□ 1.51
C11orf88-202ENST00000375618 KDM5DQ9BY66 1539 aa24.47■■□□□ 1.51
C11orf88-202ENST00000375618 ROCK1Q13464 1354 aa24.43■■□□□ 1.5
C11orf88-202ENST00000375618 ABCC3O15438 1527 aa24.43■■□□□ 1.5
C11orf88-202ENST00000375618 FAM135AQ9P2D6 1515 aa24.43■■□□□ 1.5
C11orf88-202ENST00000375618 DEPDC5O75140 1603 aa24.43■■□□□ 1.5
C11orf88-202ENST00000375618 PRDM15P57071 1507 aaPredicted RBP24.42■■□□□ 1.5
C11orf88-202ENST00000375618 WASHC2CQ9Y4E1 1318 aa24.41■■□□□ 1.5
C11orf88-202ENST00000375618 ANKRD50Q9ULJ7 1429 aa24.4■■□□□ 1.5
C11orf88-202ENST00000375618 PREX1Q8TCU6 1659 aa24.39■■□□□ 1.49
C11orf88-202ENST00000375618 CEP152O94986 1710 aa24.38■■□□□ 1.49
C11orf88-202ENST00000375618 NPATQ14207 1427 aa24.38■■□□□ 1.49
C11orf88-202ENST00000375618 HSPA2P54652 639 aa24.37■■□□□ 1.49
C11orf88-202ENST00000375618 ZC3H13Q5T200 1668 aaKnown RBP24.37■■□□□ 1.49
C11orf88-202ENST00000375618 FBXO31Q5XUX0 539 aaPredicted RBP24.36■■□□□ 1.49
C11orf88-202ENST00000375618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.36■■□□□ 1.49
C11orf88-202ENST00000375618 PZPP20742 1482 aa24.36■■□□□ 1.49
C11orf88-202ENST00000375618 VWDEQ8N2E2 1590 aa24.35■■□□□ 1.49
C11orf88-202ENST00000375618 CAMSAP1Q5T5Y3 1602 aa24.33■■□□□ 1.49
C11orf88-202ENST00000375618 UHRF1BP1Q6BDS2 1440 aa24.33■■□□□ 1.49
C11orf88-202ENST00000375618 SETD1BQ9UPS6 1966 aaKnown RBP24.32■■□□□ 1.48
C11orf88-202ENST00000375618 MYO3AQ8NEV4 1616 aa24.3■■□□□ 1.48
C11orf88-202ENST00000375618 UNC13BO14795 1591 aa24.29■■□□□ 1.48
C11orf88-202ENST00000375618 LMTK2Q8IWU2 1503 aa24.28■■□□□ 1.48
C11orf88-202ENST00000375618 NAIPQ13075 1403 aa24.27■■□□□ 1.48
C11orf88-202ENST00000375618 KANK1Q14678 1352 aa24.26■■□□□ 1.47
C11orf88-202ENST00000375618 TNRQ92752 1358 aa24.26■■□□□ 1.47
C11orf88-202ENST00000375618 ARHGAP31Q2M1Z3 1444 aa24.25■■□□□ 1.47
C11orf88-202ENST00000375618 ERVK-7P63135 1459 aa24.25■■□□□ 1.47
C11orf88-202ENST00000375618 SPATA31D1Q6ZQQ2 1576 aa24.25■■□□□ 1.47
C11orf88-202ENST00000375618 ZNF142P52746 1687 aaPredicted RBP24.23■■□□□ 1.47
C11orf88-202ENST00000375618 GCC2Q8IWJ2 1684 aa24.23■■□□□ 1.47
C11orf88-202ENST00000375618 CEP170BQ9Y4F5 1589 aaPredicted RBP24.22■■□□□ 1.47
C11orf88-202ENST00000375618 HFM1A2PYH4 1435 aa24.21■■□□□ 1.47
C11orf88-202ENST00000375618 EFCAB6Q5THR3 1501 aa24.2■■□□□ 1.47
C11orf88-202ENST00000375618 A2ML1A8K2U0 1454 aa24.19■■□□□ 1.46
C11orf88-202ENST00000375618 CFAP65Q6ZU64 1925 aaKnown RBP24.18■■□□□ 1.46
C11orf88-202ENST00000375618 STRCQ7RTU9 1775 aa24.18■■□□□ 1.46
C11orf88-202ENST00000375618 IQGAP3Q86VI3 1631 aa24.17■■□□□ 1.46
C11orf88-202ENST00000375618 TET3O43151 1660 aa24.16■■□□□ 1.46
C11orf88-202ENST00000375618 NUP155O75694 1391 aa24.15■■□□□ 1.46
C11orf88-202ENST00000375618 NLRP1Q9C000 1473 aa24.13■■□□□ 1.45
C11orf88-202ENST00000375618 SYNMO15061 1565 aa24.12■■□□□ 1.45
C11orf88-202ENST00000375618 NOS1P29475 1434 aa24.12■■□□□ 1.45
C11orf88-202ENST00000375618 E9PCH4 1651 aa24.11■■□□□ 1.45
C11orf88-202ENST00000375618 RPRD2Q5VT52 1461 aaKnown RBP24.08■■□□□ 1.45
C11orf88-202ENST00000375618 UGGT1Q9NYU2 1555 aa24.07■■□□□ 1.44
C11orf88-202ENST00000375618 NCKAP5LQ9HCH0 1330 aa24.07■■□□□ 1.44
C11orf88-202ENST00000375618 PLA2R1Q13018 1463 aa24.07■■□□□ 1.44
C11orf88-202ENST00000375618 PIK3C2BO00750 1634 aa24.04■■□□□ 1.44
C11orf88-202ENST00000375618 UBR1Q8IWV7 1749 aa24.04■■□□□ 1.44
C11orf88-202ENST00000375618 IDI1Q13907 227 aa24.03■■□□□ 1.44
C11orf88-202ENST00000375618 TRIM52Q96A61 297 aa23.99■■□□□ 1.43
C11orf88-202ENST00000375618 NEURL4Q96JN8 1562 aa23.99■■□□□ 1.43
C11orf88-202ENST00000375618 THEMISQ8N1K5 641 aaPredicted RBP23.98■■□□□ 1.43
C11orf88-202ENST00000375618 PTPRTO14522 1441 aa23.98■■□□□ 1.43
C11orf88-202ENST00000375618 SETD5Q9C0A6 1442 aa23.98■■□□□ 1.43
C11orf88-202ENST00000375618 PKD2Q13563 968 aa23.95■■□□□ 1.42
C11orf88-202ENST00000375618 POLR1AO95602 1720 aaPredicted RBP23.95■■□□□ 1.42
C11orf88-202ENST00000375618 ADGRB3O60242 1522 aa23.94■■□□□ 1.42
C11orf88-202ENST00000375618 ARHGAP23Q9P227 1491 aa23.94■■□□□ 1.42
C11orf88-202ENST00000375618 RAB3GAP2Q9H2M9 1393 aa23.93■■□□□ 1.42
C11orf88-202ENST00000375618 SLC52A1Q9NWF4 448 aa23.93■■□□□ 1.42
C11orf88-202ENST00000375618 DMRT2Q9Y5R5 561 aa23.92■■□□□ 1.42
C11orf88-202ENST00000375618 SLIT1O75093 1534 aa23.92■■□□□ 1.42
C11orf88-202ENST00000375618 SPHKAPQ2M3C7 1700 aa23.92■■□□□ 1.42
C11orf88-202ENST00000375618 KDM5AP29375 1690 aaKnown RBP23.92■■□□□ 1.42
C11orf88-202ENST00000375618 LTKP29376 864 aa23.9■■□□□ 1.42
C11orf88-202ENST00000375618 ANKLE2Q86XL3 938 aa23.9■■□□□ 1.42
C11orf88-202ENST00000375618 SLC4A1APQ9BWU0 796 aaKnown RBP23.9■■□□□ 1.42
C11orf88-202ENST00000375618 TMEM131LA2VDJ0 1609 aa23.9■■□□□ 1.42
C11orf88-202ENST00000375618 TMEM2Q9UHN6 1383 aa23.89■■□□□ 1.41
C11orf88-202ENST00000375618 MYO5BQ9ULV0 1848 aa23.89■■□□□ 1.41
C11orf88-202ENST00000375618 MED14O60244 1454 aa23.88■■□□□ 1.41
C11orf88-202ENST00000375618 FOXD1Q16676 465 aa23.87■■□□□ 1.41
C11orf88-202ENST00000375618 STAG3Q9UJ98 1225 aa23.87■■□□□ 1.41
C11orf88-202ENST00000375618 NPHP4O75161 1426 aaPredicted RBP23.86■■□□□ 1.41
C11orf88-202ENST00000375618 TRPM2O94759 1503 aa23.86■■□□□ 1.41
C11orf88-202ENST00000375618 SCAF11Q99590 1463 aaKnown RBP23.86■■□□□ 1.41
C11orf88-202ENST00000375618 CLTCL1P53675 1640 aa23.85■■□□□ 1.41
C11orf88-202ENST00000375618 MPHOSPH9Q99550 1183 aa23.85■■□□□ 1.41
C11orf88-202ENST00000375618 TXNDC2Q86VQ3 553 aa23.84■■□□□ 1.41
C11orf88-202ENST00000375618 IQGAP1P46940 1657 aa23.83■■□□□ 1.4
C11orf88-202ENST00000375618 LTBP4Q8N2S1 1624 aa23.82■■□□□ 1.4
C11orf88-202ENST00000375618 ZFYVE9O95405 1425 aa23.82■■□□□ 1.4
C11orf88-202ENST00000375618 ZNF335Q9H4Z2 1342 aaPredicted RBP23.82■■□□□ 1.4
C11orf88-202ENST00000375618 CHGAP10645 457 aaKnown RBP23.81■■□□□ 1.4
C11orf88-202ENST00000375618 RIMS2Q9UQ26 1411 aa23.78■■□□□ 1.4
C11orf88-202ENST00000375618 EID1Q9Y6B2 187 aa23.76■■□□□ 1.39
C11orf88-202ENST00000375618 HRCP23327 699 aa23.73■■□□□ 1.39
C11orf88-202ENST00000375618 NUTM2DQ5VT03 806 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms