RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 DUOX2Q9NRD8 1548 aa32.04■■■□□ 2.72
MAP1LC3A-202ENST00000374837 CNTLNQ9NXG0 1405 aa32.02■■■□□ 2.72
MAP1LC3A-202ENST00000374837 ADGRL2O95490 1459 aa32.02■■■□□ 2.72
MAP1LC3A-202ENST00000374837 LMTK3Q96Q04 1460 aa32.02■■■□□ 2.72
MAP1LC3A-202ENST00000374837 ZMYM3Q14202 1370 aa31.96■■■□□ 2.71
MAP1LC3A-202ENST00000374837 ERBINQ96RT1 1412 aa31.96■■■□□ 2.71
MAP1LC3A-202ENST00000374837 HSPA2P54652 639 aa31.94■■■□□ 2.7
MAP1LC3A-202ENST00000374837 WASHC2CQ9Y4E1 1318 aa31.93■■■□□ 2.7
MAP1LC3A-202ENST00000374837 ROCK1Q13464 1354 aa31.93■■■□□ 2.7
MAP1LC3A-202ENST00000374837 EIF2AK4Q9P2K8 1649 aaKnown RBP31.9■■■□□ 2.7
MAP1LC3A-202ENST00000374837 ANKRD50Q9ULJ7 1429 aa31.87■■■□□ 2.69
MAP1LC3A-202ENST00000374837 CLTCQ00610 1675 aaKnown RBP31.86■■■□□ 2.69
MAP1LC3A-202ENST00000374837 RNF17Q9BXT8 1623 aaKnown RBP31.86■■■□□ 2.69
MAP1LC3A-202ENST00000374837 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.86■■■□□ 2.69
MAP1LC3A-202ENST00000374837 C3P01024 1663 aa31.84■■■□□ 2.69
MAP1LC3A-202ENST00000374837 KDM5DQ9BY66 1539 aa31.83■■■□□ 2.69
MAP1LC3A-202ENST00000374837 FAM135AQ9P2D6 1515 aa31.83■■■□□ 2.69
MAP1LC3A-202ENST00000374837 MROH2AA6NES4 1674 aa31.83■■■□□ 2.69
MAP1LC3A-202ENST00000374837 MROH1Q8NDA8 1641 aa31.82■■■□□ 2.68
MAP1LC3A-202ENST00000374837 CERKQ8TCT0 537 aa31.81■■■□□ 2.68
MAP1LC3A-202ENST00000374837 ABCC3O15438 1527 aa31.78■■■□□ 2.68
MAP1LC3A-202ENST00000374837 NPATQ14207 1427 aa31.77■■■□□ 2.68
MAP1LC3A-202ENST00000374837 FBXO31Q5XUX0 539 aaPredicted RBP31.76■■■□□ 2.67
MAP1LC3A-202ENST00000374837 KANK1Q14678 1352 aa31.75■■■□□ 2.67
MAP1LC3A-202ENST00000374837 PRDM15P57071 1507 aaPredicted RBP31.74■■■□□ 2.67
MAP1LC3A-202ENST00000374837 PZPP20742 1482 aa31.72■■■□□ 2.67
MAP1LC3A-202ENST00000374837 DEPDC5O75140 1603 aa31.71■■■□□ 2.67
MAP1LC3A-202ENST00000374837 UHRF1BP1Q6BDS2 1440 aa31.7■■■□□ 2.67
MAP1LC3A-202ENST00000374837 NAIPQ13075 1403 aa31.66■■■□□ 2.66
MAP1LC3A-202ENST00000374837 SETD1BQ9UPS6 1966 aaKnown RBP31.66■■■□□ 2.66
MAP1LC3A-202ENST00000374837 ZC3H13Q5T200 1668 aaKnown RBP31.66■■■□□ 2.66
MAP1LC3A-202ENST00000374837 VWDEQ8N2E2 1590 aa31.65■■■□□ 2.66
MAP1LC3A-202ENST00000374837 TNRQ92752 1358 aa31.64■■■□□ 2.66
MAP1LC3A-202ENST00000374837 PREX1Q8TCU6 1659 aa31.63■■■□□ 2.65
MAP1LC3A-202ENST00000374837 CEP152O94986 1710 aa31.62■■■□□ 2.65
MAP1LC3A-202ENST00000374837 ARHGAP31Q2M1Z3 1444 aa31.62■■■□□ 2.65
MAP1LC3A-202ENST00000374837 LMTK2Q8IWU2 1503 aa31.62■■■□□ 2.65
MAP1LC3A-202ENST00000374837 HFM1A2PYH4 1435 aa31.61■■■□□ 2.65
MAP1LC3A-202ENST00000374837 CAMSAP1Q5T5Y3 1602 aa31.59■■■□□ 2.65
MAP1LC3A-202ENST00000374837 NUP155O75694 1391 aa31.58■■■□□ 2.65
MAP1LC3A-202ENST00000374837 UNC13BO14795 1591 aa31.56■■■□□ 2.64
MAP1LC3A-202ENST00000374837 ERVK-7P63135 1459 aa31.56■■■□□ 2.64
MAP1LC3A-202ENST00000374837 DISP3Q9P2K9 1392 aa31.53■■■□□ 2.64
MAP1LC3A-202ENST00000374837 SPATA31D1Q6ZQQ2 1576 aa31.52■■■□□ 2.64
MAP1LC3A-202ENST00000374837 ILDR2Q71H61 639 aa31.5■■■□□ 2.63
MAP1LC3A-202ENST00000374837 MYO3AQ8NEV4 1616 aa31.49■■■□□ 2.63
MAP1LC3A-202ENST00000374837 A2ML1A8K2U0 1454 aa31.49■■■□□ 2.63
MAP1LC3A-202ENST00000374837 DMRT2Q9Y5R5 561 aa31.49■■■□□ 2.63
MAP1LC3A-202ENST00000374837 GCC2Q8IWJ2 1684 aa31.48■■■□□ 2.63
MAP1LC3A-202ENST00000374837 EFCAB6Q5THR3 1501 aa31.48■■■□□ 2.63
MAP1LC3A-202ENST00000374837 CEP170BQ9Y4F5 1589 aaPredicted RBP31.47■■■□□ 2.63
MAP1LC3A-202ENST00000374837 NLRP1Q9C000 1473 aa31.46■■■□□ 2.63
MAP1LC3A-202ENST00000374837 TRIM52Q96A61 297 aa31.45■■■□□ 2.63
MAP1LC3A-202ENST00000374837 IQGAP3Q86VI3 1631 aa31.44■■■□□ 2.62
MAP1LC3A-202ENST00000374837 NOS1P29475 1434 aa31.42■■■□□ 2.62
MAP1LC3A-202ENST00000374837 TET3O43151 1660 aa31.42■■■□□ 2.62
MAP1LC3A-202ENST00000374837 RPRD2Q5VT52 1461 aaKnown RBP31.42■■■□□ 2.62
MAP1LC3A-202ENST00000374837 SOCS7O14512 581 aa31.4■■■□□ 2.62
MAP1LC3A-202ENST00000374837 ZNF142P52746 1687 aaPredicted RBP31.4■■■□□ 2.62
MAP1LC3A-202ENST00000374837 STRCQ7RTU9 1775 aa31.4■■■□□ 2.62
MAP1LC3A-202ENST00000374837 THEMISQ8N1K5 641 aaPredicted RBP31.39■■■□□ 2.62
MAP1LC3A-202ENST00000374837 CFAP65Q6ZU64 1925 aaKnown RBP31.39■■■□□ 2.62
MAP1LC3A-202ENST00000374837 SETD5Q9C0A6 1442 aa31.39■■■□□ 2.62
MAP1LC3A-202ENST00000374837 IDI1Q13907 227 aa31.38■■■□□ 2.61
MAP1LC3A-202ENST00000374837 NCKAP5LQ9HCH0 1330 aa31.35■■■□□ 2.61
MAP1LC3A-202ENST00000374837 UGGT1Q9NYU2 1555 aa31.34■■■□□ 2.61
MAP1LC3A-202ENST00000374837 SLC52A1Q9NWF4 448 aa31.34■■■□□ 2.61
MAP1LC3A-202ENST00000374837 PLA2R1Q13018 1463 aa31.33■■■□□ 2.61
MAP1LC3A-202ENST00000374837 SYNMO15061 1565 aa31.31■■■□□ 2.6
MAP1LC3A-202ENST00000374837 PKD2Q13563 968 aa31.31■■■□□ 2.6
MAP1LC3A-202ENST00000374837 SLC4A1APQ9BWU0 796 aaKnown RBP31.31■■■□□ 2.6
MAP1LC3A-202ENST00000374837 E9PCH4 1651 aa31.31■■■□□ 2.6
MAP1LC3A-202ENST00000374837 STAG3Q9UJ98 1225 aa31.28■■■□□ 2.6
MAP1LC3A-202ENST00000374837 RAB3GAP2Q9H2M9 1393 aa31.28■■■□□ 2.6
MAP1LC3A-202ENST00000374837 ANKLE2Q86XL3 938 aa31.26■■■□□ 2.59
MAP1LC3A-202ENST00000374837 ACIN1Q9UKV3 1341 aaKnown RBP31.24■■■□□ 2.59
MAP1LC3A-202ENST00000374837 PTPRTO14522 1441 aa31.24■■■□□ 2.59
MAP1LC3A-202ENST00000374837 MPHOSPH9Q99550 1183 aa31.22■■■□□ 2.59
MAP1LC3A-202ENST00000374837 PIK3C2BO00750 1634 aa31.22■■■□□ 2.59
MAP1LC3A-202ENST00000374837 UBR1Q8IWV7 1749 aa31.19■■■□□ 2.58
MAP1LC3A-202ENST00000374837 HRCP23327 699 aa31.18■■■□□ 2.58
MAP1LC3A-202ENST00000374837 CHGAP10645 457 aaKnown RBP31.16■■■□□ 2.58
MAP1LC3A-202ENST00000374837 LTKP29376 864 aa31.16■■■□□ 2.58
MAP1LC3A-202ENST00000374837 FOXD1Q16676 465 aa31.16■■■□□ 2.58
MAP1LC3A-202ENST00000374837 TXNDC2Q86VQ3 553 aa31.16■■■□□ 2.58
MAP1LC3A-202ENST00000374837 TMEM2Q9UHN6 1383 aa31.16■■■□□ 2.58
MAP1LC3A-202ENST00000374837 ARHGAP23Q9P227 1491 aa31.14■■■□□ 2.58
MAP1LC3A-202ENST00000374837 ADGRB3O60242 1522 aa31.13■■■□□ 2.57
MAP1LC3A-202ENST00000374837 SLIT1O75093 1534 aa31.13■■■□□ 2.57
MAP1LC3A-202ENST00000374837 EID1Q9Y6B2 187 aa31.12■■■□□ 2.57
MAP1LC3A-202ENST00000374837 LTBP4Q8N2S1 1624 aa31.1■■■□□ 2.57
MAP1LC3A-202ENST00000374837 NEURL4Q96JN8 1562 aa31.09■■■□□ 2.57
MAP1LC3A-202ENST00000374837 KDM5AP29375 1690 aaKnown RBP31.09■■■□□ 2.57
MAP1LC3A-202ENST00000374837 MED14O60244 1454 aa31.08■■■□□ 2.57
MAP1LC3A-202ENST00000374837 NPHP4O75161 1426 aaPredicted RBP31.08■■■□□ 2.57
MAP1LC3A-202ENST00000374837 SCAF11Q99590 1463 aaKnown RBP31.08■■■□□ 2.57
MAP1LC3A-202ENST00000374837 TRIM26Q12899 539 aaPredicted RBP31.07■■■□□ 2.56
MAP1LC3A-202ENST00000374837 SPHKAPQ2M3C7 1700 aa31.07■■■□□ 2.56
MAP1LC3A-202ENST00000374837 TRPM2O94759 1503 aa31.06■■■□□ 2.56
MAP1LC3A-202ENST00000374837 TMEM131LA2VDJ0 1609 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms