RNA–Protein interactions for RNA: ENST00000374737.8

VSIG4-201, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG4, Length 1,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-201ENST00000374737 SENP3Q9H4L4 574 aaPredicted RBP13.44□□□□□ -0.26
VSIG4-201ENST00000374737 AGLP35573 1532 aa13.43□□□□□ -0.26
VSIG4-201ENST00000374737 NUP155O75694 1391 aa13.43□□□□□ -0.26
VSIG4-201ENST00000374737 WASHC2CQ9Y4E1 1318 aa13.43□□□□□ -0.26
VSIG4-201ENST00000374737 ESF1Q9H501 851 aaKnown RBP13.41□□□□□ -0.26
VSIG4-201ENST00000374737 EIF2AK4Q9P2K8 1649 aaKnown RBP13.41□□□□□ -0.26
VSIG4-201ENST00000374737 PLPPR3Q6T4P5 718 aa13.41□□□□□ -0.26
VSIG4-201ENST00000374737 HRCP23327 699 aa13.39□□□□□ -0.27
VSIG4-201ENST00000374737 KANK1Q14678 1352 aa13.39□□□□□ -0.27
VSIG4-201ENST00000374737 SLC4A1APQ9BWU0 796 aaKnown RBP13.39□□□□□ -0.27
VSIG4-201ENST00000374737 MROH1Q8NDA8 1641 aa13.38□□□□□ -0.27
VSIG4-201ENST00000374737 MPHOSPH9Q99550 1183 aa13.37□□□□□ -0.27
VSIG4-201ENST00000374737 RNF17Q9BXT8 1623 aaKnown RBP13.37□□□□□ -0.27
VSIG4-201ENST00000374737 BCORL1Q5H9F3 1711 aa13.37□□□□□ -0.27
VSIG4-201ENST00000374737 FOXD1Q16676 465 aa13.36□□□□□ -0.27
VSIG4-201ENST00000374737 PPP6R1Q9UPN7 881 aa13.36□□□□□ -0.27
VSIG4-201ENST00000374737 DEPDC5O75140 1603 aa13.36□□□□□ -0.27
VSIG4-201ENST00000374737 CEBPAP49715 358 aaPredicted RBP13.36□□□□□ -0.27
VSIG4-201ENST00000374737 UNC13BO14795 1591 aa13.35□□□□□ -0.27
VSIG4-201ENST00000374737 PRDM15P57071 1507 aaPredicted RBP13.35□□□□□ -0.27
VSIG4-201ENST00000374737 KDM4FA0A1W2PPD8 638 aa13.35□□□□□ -0.27
VSIG4-201ENST00000374737 PKD2Q13563 968 aa13.34□□□□□ -0.27
VSIG4-201ENST00000374737 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
VSIG4-201ENST00000374737 PZPP20742 1482 aa13.33□□□□□ -0.27
VSIG4-201ENST00000374737 ZMYM3Q14202 1370 aa13.33□□□□□ -0.28
VSIG4-201ENST00000374737 FBXO31Q5XUX0 539 aaPredicted RBP13.33□□□□□ -0.28
VSIG4-201ENST00000374737 ABCC3O15438 1527 aa13.33□□□□□ -0.28
VSIG4-201ENST00000374737 CLTCQ00610 1675 aaKnown RBP13.33□□□□□ -0.28
VSIG4-201ENST00000374737 ACIN1Q9UKV3 1341 aaKnown RBP13.32□□□□□ -0.28
VSIG4-201ENST00000374737 KDM5DQ9BY66 1539 aa13.32□□□□□ -0.28
VSIG4-201ENST00000374737 CEP152O94986 1710 aa13.32□□□□□ -0.28
VSIG4-201ENST00000374737 MADDQ8WXG6 1647 aa13.32□□□□□ -0.28
VSIG4-201ENST00000374737 VWDEQ8N2E2 1590 aa13.32□□□□□ -0.28
VSIG4-201ENST00000374737 IQGAP3Q86VI3 1631 aa13.31□□□□□ -0.28
VSIG4-201ENST00000374737 ADAMTSL3P82987 1691 aa13.31□□□□□ -0.28
VSIG4-201ENST00000374737 FER1L4A9Z1Z3 1794 aa13.3□□□□□ -0.28
VSIG4-201ENST00000374737 CNTLNQ9NXG0 1405 aa13.3□□□□□ -0.28
VSIG4-201ENST00000374737 RIMS1Q86UR5 1692 aaKnown RBP13.29□□□□□ -0.28
VSIG4-201ENST00000374737 DHX57Q6P158 1386 aaKnown RBP13.29□□□□□ -0.28
VSIG4-201ENST00000374737 NPATQ14207 1427 aa13.28□□□□□ -0.28
VSIG4-201ENST00000374737 LMTK2Q8IWU2 1503 aa13.28□□□□□ -0.28
VSIG4-201ENST00000374737 CAMSAP1Q5T5Y3 1602 aa13.27□□□□□ -0.28
VSIG4-201ENST00000374737 ZC3H13Q5T200 1668 aaKnown RBP13.27□□□□□ -0.29
VSIG4-201ENST00000374737 CCER1Q8TC90 406 aaPredicted RBP13.27□□□□□ -0.29
VSIG4-201ENST00000374737 CFAP65Q6ZU64 1925 aaKnown RBP13.27□□□□□ -0.29
VSIG4-201ENST00000374737 EFCAB6Q5THR3 1501 aa13.26□□□□□ -0.29
VSIG4-201ENST00000374737 TET3O43151 1660 aa13.26□□□□□ -0.29
VSIG4-201ENST00000374737 PTPRMP28827 1452 aa13.26□□□□□ -0.29
VSIG4-201ENST00000374737 E9PCH4 1651 aa13.25□□□□□ -0.29
VSIG4-201ENST00000374737 ARHGAP31Q2M1Z3 1444 aa13.25□□□□□ -0.29
VSIG4-201ENST00000374737 C3P01024 1663 aa13.24□□□□□ -0.29
VSIG4-201ENST00000374737 MROH2AA6NES4 1674 aa13.22□□□□□ -0.29
VSIG4-201ENST00000374737 SIN3AQ96ST3 1273 aa13.22□□□□□ -0.29
VSIG4-201ENST00000374737 PLA2R1Q13018 1463 aa13.21□□□□□ -0.29
VSIG4-201ENST00000374737 RPRD2Q5VT52 1461 aaKnown RBP13.21□□□□□ -0.29
VSIG4-201ENST00000374737 NEUROD1Q13562 356 aa13.21□□□□□ -0.29
VSIG4-201ENST00000374737 ERVK-7P63135 1459 aa13.21□□□□□ -0.3
VSIG4-201ENST00000374737 IDI1Q13907 227 aa13.2□□□□□ -0.3
VSIG4-201ENST00000374737 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
VSIG4-201ENST00000374737 CHGAP10645 457 aaKnown RBP13.2□□□□□ -0.3
VSIG4-201ENST00000374737 TNRQ92752 1358 aa13.2□□□□□ -0.3
VSIG4-201ENST00000374737 NOS1P29475 1434 aa13.2□□□□□ -0.3
VSIG4-201ENST00000374737 UGGT1Q9NYU2 1555 aa13.19□□□□□ -0.3
VSIG4-201ENST00000374737 PTPRTO14522 1441 aa13.19□□□□□ -0.3
VSIG4-201ENST00000374737 PREX1Q8TCU6 1659 aa13.19□□□□□ -0.3
VSIG4-201ENST00000374737 SYNMO15061 1565 aa13.17□□□□□ -0.3
VSIG4-201ENST00000374737 SPATA31D1Q6ZQQ2 1576 aa13.17□□□□□ -0.3
VSIG4-201ENST00000374737 CCDC144AA2RUR9 1427 aa13.17□□□□□ -0.3
VSIG4-201ENST00000374737 SLC52A1Q9NWF4 448 aa13.17□□□□□ -0.3
VSIG4-201ENST00000374737 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
VSIG4-201ENST00000374737 SPHKAPQ2M3C7 1700 aa13.16□□□□□ -0.3
VSIG4-201ENST00000374737 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
VSIG4-201ENST00000374737 RGL3Q3MIN7 710 aa13.16□□□□□ -0.3
VSIG4-201ENST00000374737 TRPM2O94759 1503 aa13.15□□□□□ -0.3
VSIG4-201ENST00000374737 CLTCL1P53675 1640 aa13.13□□□□□ -0.31
VSIG4-201ENST00000374737 ZNF326Q5BKZ1 582 aaKnown RBP13.13□□□□□ -0.31
VSIG4-201ENST00000374737 NUTM2DQ5VT03 806 aaPredicted RBP13.11□□□□□ -0.31
VSIG4-201ENST00000374737 UHRF1BP1Q6BDS2 1440 aa13.11□□□□□ -0.31
VSIG4-201ENST00000374737 NLRP1Q9C000 1473 aa13.1□□□□□ -0.31
VSIG4-201ENST00000374737 PIK3C2BO00750 1634 aa13.1□□□□□ -0.31
VSIG4-201ENST00000374737 HSPA2P54652 639 aa13.1□□□□□ -0.31
VSIG4-201ENST00000374737 CLSPNQ9HAW4 1339 aa13.1□□□□□ -0.31
VSIG4-201ENST00000374737 MYO3AQ8NEV4 1616 aa13.1□□□□□ -0.31
VSIG4-201ENST00000374737 SETD1BQ9UPS6 1966 aaKnown RBP13.09□□□□□ -0.31
VSIG4-201ENST00000374737 THEMISQ8N1K5 641 aaPredicted RBP13.09□□□□□ -0.31
VSIG4-201ENST00000374737 A2ML1A8K2U0 1454 aa13.08□□□□□ -0.32
VSIG4-201ENST00000374737 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
VSIG4-201ENST00000374737 DCAF11Q8TEB1 546 aa13.07□□□□□ -0.32
VSIG4-201ENST00000374737 L3MBTL2Q969R5 705 aa13.07□□□□□ -0.32
VSIG4-201ENST00000374737 CEP170BQ9Y4F5 1589 aaPredicted RBP13.07□□□□□ -0.32
VSIG4-201ENST00000374737 SPATA31E1Q6ZUB1 1445 aa13.06□□□□□ -0.32
VSIG4-201ENST00000374737 TMEM131LA2VDJ0 1609 aa13.06□□□□□ -0.32
VSIG4-201ENST00000374737 TONSLQ96HA7 1378 aa13.05□□□□□ -0.32
VSIG4-201ENST00000374737 KIF1BO60333 1816 aa13.05□□□□□ -0.32
VSIG4-201ENST00000374737 ADGRB3O60242 1522 aa13.05□□□□□ -0.32
VSIG4-201ENST00000374737 UBR1Q8IWV7 1749 aa13.04□□□□□ -0.32
VSIG4-201ENST00000374737 TXNDC2Q86VQ3 553 aa13.04□□□□□ -0.32
VSIG4-201ENST00000374737 LMTK3Q96Q04 1460 aa13.04□□□□□ -0.32
VSIG4-201ENST00000374737 MYO5BQ9ULV0 1848 aa13.04□□□□□ -0.32
VSIG4-201ENST00000374737 LTKP29376 864 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms